RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 MEGF6O75095 1541 aa15.2■□□□□ 0.02
HSPG2-202ENST00000374676 LRRC37A3O60309 1634 aa15.2■□□□□ 0.02
HSPG2-202ENST00000374676 ZCRB1Q8TBF4 217 aaKnown RBP15.19■□□□□ 0.02
HSPG2-202ENST00000374676 TNS2Q63HR2 1409 aa15.18■□□□□ 0.02
HSPG2-202ENST00000374676 FCHSD2O94868 740 aa15.18■□□□□ 0.02
HSPG2-202ENST00000374676 HMOX1P09601 288 aa15.18■□□□□ 0.02
HSPG2-202ENST00000374676 U2AF1L5P0DN76 240 aaPredicted RBP15.18■□□□□ 0.02
HSPG2-202ENST00000374676 U2AF1Q01081 240 aaKnown RBP eCLIP15.18■□□□□ 0.02
HSPG2-202ENST00000374676 MARCH10Q8NA82 808 aaPredicted RBP15.17■□□□□ 0.02
HSPG2-202ENST00000374676 SPG7Q9UQ90 795 aa15.17■□□□□ 0.02
HSPG2-202ENST00000374676 PKD1L3Q7Z443 1732 aa15.17■□□□□ 0.02
HSPG2-202ENST00000374676 AMOTQ4VCS5 1084 aa15.16■□□□□ 0.02
HSPG2-202ENST00000374676 PLEKHO1Q53GL0 409 aaPredicted RBP15.16■□□□□ 0.02
HSPG2-202ENST00000374676 RSPH6AQ9H0K4 717 aa15.16■□□□□ 0.02
HSPG2-202ENST00000374676 KAT6BQ8WYB5 2073 aa15.16■□□□□ 0.02
HSPG2-202ENST00000374676 SHANK3Q9BYB0 1731 aa15.15■□□□□ 0.02
HSPG2-202ENST00000374676 CCDC184Q52MB2 194 aa15.15■□□□□ 0.02
HSPG2-202ENST00000374676 FAM196AQ6ZSG2 479 aa15.14■□□□□ 0.01
HSPG2-202ENST00000374676 PNNQ9H307 717 aaKnown RBP15.14■□□□□ 0.01
HSPG2-202ENST00000374676 BCL9O00512 1426 aa15.14■□□□□ 0.01
HSPG2-202ENST00000374676 PCDH11XQ9BZA7 1347 aa15.14■□□□□ 0.01
HSPG2-202ENST00000374676 PCDH11YQ9BZA8 1340 aa15.14■□□□□ 0.01
HSPG2-202ENST00000374676 CYP27B1O15528 508 aa15.13■□□□□ 0.01
HSPG2-202ENST00000374676 PRKAR2BP31323 418 aa15.13■□□□□ 0.01
HSPG2-202ENST00000374676 WDR43Q15061 677 aaKnown RBP eCLIP15.13■□□□□ 0.017e-6■□□□□ 9.7
HSPG2-202ENST00000374676 DDX54Q8TDD1 881 aaKnown RBP15.13■□□□□ 0.01
HSPG2-202ENST00000374676 MRS2Q9HD23 443 aa15.13■□□□□ 0.01
HSPG2-202ENST00000374676 CCER2I3L3R5 266 aa15.12■□□□□ 0.01
HSPG2-202ENST00000374676 NKX1-1Q15270 411 aaPredicted RBP15.12■□□□□ 0.01
HSPG2-202ENST00000374676 IFNL2Q8IZJ0 200 aa15.12■□□□□ 0.01
HSPG2-202ENST00000374676 PNISRQ8TF01 805 aaKnown RBP15.12■□□□□ 0.01
HSPG2-202ENST00000374676 FAM182BQ5T319 152 aa15.11■□□□□ 0.01
HSPG2-202ENST00000374676 PLEKHF1Q96S99 279 aa15.11■□□□□ 0.01
HSPG2-202ENST00000374676 ADAMTS8Q9UP79 889 aa15.11■□□□□ 0.01
HSPG2-202ENST00000374676 SBF2Q86WG5 1849 aa15.1■□□□□ 0.01
HSPG2-202ENST00000374676 PHKG2P15735 406 aa15.1■□□□□ 0.01
HSPG2-202ENST00000374676 MTHFSDQ2M296 383 aaKnown RBP15.1■□□□□ 0.01
HSPG2-202ENST00000374676 ZNF530Q6P9A1 599 aaPredicted RBP15.1■□□□□ 0.01
HSPG2-202ENST00000374676 PHACTR3Q96KR7 559 aa15.1■□□□□ 0.01
HSPG2-202ENST00000374676 HSP90AB1P08238 724 aaKnown RBP15.09■□□□□ 0.01
HSPG2-202ENST00000374676 GAS2L2Q8NHY3 880 aa15.09■□□□□ 0.01
HSPG2-202ENST00000374676 EP400Q96L91 3159 aa15.09■□□□□ 0.01
HSPG2-202ENST00000374676 NEFMP07197 916 aa15.08■□□□□ 0
HSPG2-202ENST00000374676 AKAP4Q5JQC9 854 aa15.08■□□□□ 0
HSPG2-202ENST00000374676 C1orf141Q5JVX7 400 aa15.08■□□□□ 0
HSPG2-202ENST00000374676 MIER1Q8N108 512 aa15.08■□□□□ 0
HSPG2-202ENST00000374676 CCDC125Q86Z20 511 aa15.07■□□□□ 0
HSPG2-202ENST00000374676 RUNDC1Q96C34 613 aa15.06■□□□□ 0
HSPG2-202ENST00000374676 DCAF5Q96JK2 942 aa15.06■□□□□ 0
HSPG2-202ENST00000374676 UPF1Q92900 1129 aaKnown RBP eCLIP15.05■□□□□ -0
HSPG2-202ENST00000374676 BCL11BQ9C0K0 894 aaPredicted RBP15.05■□□□□ -0
HSPG2-202ENST00000374676 MAPK8IP3Q9UPT6 1336 aa15.05■□□□□ -0
HSPG2-202ENST00000374676 VIRMAQ69YN4 1812 aaKnown RBP15.04■□□□□ -0
HSPG2-202ENST00000374676 SCN11AQ9UI33 1791 aa15.04■□□□□ -0
HSPG2-202ENST00000374676 GNAT3A8MTJ3 354 aa15.04■□□□□ -0
HSPG2-202ENST00000374676 TRIM37O94972 964 aa15.04■□□□□ -0
HSPG2-202ENST00000374676 DLG5Q8TDM6 1919 aa15.04■□□□□ -0
HSPG2-202ENST00000374676 ITGB4P16144 1822 aa15.03■□□□□ -0
HSPG2-202ENST00000374676 NHSQ6T4R5 1651 aa15.03■□□□□ -0
HSPG2-202ENST00000374676 ERVV-2B6SEH9 535 aa15.03■□□□□ -0
HSPG2-202ENST00000374676 HTATSF1O43719 755 aaKnown RBP15.03■□□□□ -0
HSPG2-202ENST00000374676 PRIM1P49642 420 aaKnown RBP15.03■□□□□ -0
HSPG2-202ENST00000374676 NFE2L2Q16236 605 aa15.03■□□□□ -0
HSPG2-202ENST00000374676 MPRIPQ6WCQ1 1025 aa15.03■□□□□ -0
HSPG2-202ENST00000374676 ACSBG1Q96GR2 724 aa15.03■□□□□ -0
HSPG2-202ENST00000374676 DOT1LQ8TEK3 1739 aa15.03■□□□□ -0
HSPG2-202ENST00000374676 ADAMTS7Q9UKP4 1686 aa15.03■□□□□ -0
HSPG2-202ENST00000374676 MAP3K5Q99683 1374 aa15.02■□□□□ -0
HSPG2-202ENST00000374676 SOCS7O14512 581 aa15.02■□□□□ -0
HSPG2-202ENST00000374676 KCNQ2O43526 872 aa15.02■□□□□ -0
HSPG2-202ENST00000374676 CCDC146Q8IYE0 955 aa15.02■□□□□ -0
HSPG2-202ENST00000374676 TOGARAM1Q9Y4F4 1720 aa15.02□□□□□ -0.01
HSPG2-202ENST00000374676 KDM6AO15550 1401 aaPredicted RBP15.01□□□□□ -0.01
HSPG2-202ENST00000374676 RNMTO43148 476 aaKnown RBP15.01□□□□□ -0.01
HSPG2-202ENST00000374676 TMPOP42166 694 aaKnown RBP15.01□□□□□ -0.01
HSPG2-202ENST00000374676 FAM9BQ8IZU0 186 aa15.01□□□□□ -0.01
HSPG2-202ENST00000374676 LGR6Q9HBX8 967 aa15.01□□□□□ -0.01
HSPG2-202ENST00000374676 TNS1Q9HBL0 1735 aaKnown RBP15□□□□□ -0.01
HSPG2-202ENST00000374676 SF3B2Q13435 895 aaKnown RBP15□□□□□ -0.01
HSPG2-202ENST00000374676 PTF1AQ7RTS3 328 aa15□□□□□ -0.01
HSPG2-202ENST00000374676 IL17REQ8NFR9 667 aa15□□□□□ -0.01
HSPG2-202ENST00000374676 BTAF1O14981 1849 aa14.99□□□□□ -0.01
HSPG2-202ENST00000374676 RIPK4P57078 832 aa14.99□□□□□ -0.01
HSPG2-202ENST00000374676 RTF1Q92541 710 aaKnown RBP14.99□□□□□ -0.01
HSPG2-202ENST00000374676 SYTL4Q96C24 671 aaPredicted RBP14.99□□□□□ -0.01
HSPG2-202ENST00000374676 CEMIPQ8WUJ3 1361 aa14.98□□□□□ -0.01
HSPG2-202ENST00000374676 APAF1O14727 1248 aa14.98□□□□□ -0.01
HSPG2-202ENST00000374676 PLSCR1O15162 318 aa14.98□□□□□ -0.01
HSPG2-202ENST00000374676 APBA3O96018 575 aa14.98□□□□□ -0.01
HSPG2-202ENST00000374676 CABP4P57796 275 aa14.98□□□□□ -0.01
HSPG2-202ENST00000374676 NCBP3Q53F19 620 aaKnown RBP14.98□□□□□ -0.01
HSPG2-202ENST00000374676 PIGBQ92521 554 aa14.98□□□□□ -0.01
HSPG2-202ENST00000374676 TMOD3Q9NYL9 352 aa14.98□□□□□ -0.01
HSPG2-202ENST00000374676 BAG6P46379 1132 aa14.97□□□□□ -0.01
HSPG2-202ENST00000374676 LMOD3Q0VAK6 560 aa14.97□□□□□ -0.01
HSPG2-202ENST00000374676 NFATC2IPQ8NCF5 419 aa14.97□□□□□ -0.01
HSPG2-202ENST00000374676 SLC52A2Q9HAB3 445 aa14.97□□□□□ -0.01
HSPG2-202ENST00000374676 MRC1P22897 1456 aa14.96□□□□□ -0.01
HSPG2-202ENST00000374676 TEFQ10587 303 aa14.95□□□□□ -0.02
HSPG2-202ENST00000374676 NEUROD2Q15784 382 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms