RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 PNISRQ8TF01 805 aaKnown RBP23.39■■□□□ 1.33
PFDN6-201ENST00000374606 HOXC9P31274 260 aa23.38■■□□□ 1.33
PFDN6-201ENST00000374606 FAM9BQ8IZU0 186 aa23.38■■□□□ 1.33
PFDN6-201ENST00000374606 ANO8Q9HCE9 1232 aaPredicted RBP23.38■■□□□ 1.33
PFDN6-201ENST00000374606 DIAPH1O60610 1272 aaKnown RBP23.37■■□□□ 1.33
PFDN6-201ENST00000374606 BCL11BQ9C0K0 894 aaPredicted RBP23.36■■□□□ 1.33
PFDN6-201ENST00000374606 WNK3Q9BYP7 1800 aa23.36■■□□□ 1.33
PFDN6-201ENST00000374606 TOM1L2Q6ZVM7 507 aa23.35■■□□□ 1.33
PFDN6-201ENST00000374606 IP6K1Q92551 441 aa23.35■■□□□ 1.33
PFDN6-201ENST00000374606 NUDCQ9Y266 331 aa23.35■■□□□ 1.33
PFDN6-201ENST00000374606 COL18A1P39060 1754 aa23.35■■□□□ 1.33
PFDN6-201ENST00000374606 HSP90AB2PQ58FF8 381 aa23.34■■□□□ 1.33
PFDN6-201ENST00000374606 RGPD5Q99666 1765 aa23.32■■□□□ 1.32
PFDN6-201ENST00000374606 CDCA7Q9BWT1 371 aaPredicted RBP23.32■■□□□ 1.32
PFDN6-201ENST00000374606 BCL9O00512 1426 aa23.32■■□□□ 1.32
PFDN6-201ENST00000374606 WDR17Q8IZU2 1322 aa23.32■■□□□ 1.32
PFDN6-201ENST00000374606 U2SURPO15042 1029 aaKnown RBP23.31■■□□□ 1.32
PFDN6-201ENST00000374606 EIF4A2Q14240 407 aaKnown RBP23.31■■□□□ 1.32
PFDN6-201ENST00000374606 PTF1AQ7RTS3 328 aa23.31■■□□□ 1.32
PFDN6-201ENST00000374606 ZBTB7AO95365 584 aa23.3■■□□□ 1.32
PFDN6-201ENST00000374606 IL13P35225 146 aa23.3■■□□□ 1.32
PFDN6-201ENST00000374606 FAM208AQ9UK61 1670 aaKnown RBP23.29■■□□□ 1.32
PFDN6-201ENST00000374606 MARCH10Q8NA82 808 aaPredicted RBP23.29■■□□□ 1.32
PFDN6-201ENST00000374606 PDGFDQ9GZP0 370 aaPredicted RBP23.29■■□□□ 1.32
PFDN6-201ENST00000374606 U2AF1L5P0DN76 240 aaPredicted RBP23.28■■□□□ 1.32
PFDN6-201ENST00000374606 U2AF1Q01081 240 aaKnown RBP eCLIP23.28■■□□□ 1.32
PFDN6-201ENST00000374606 PROM2Q8N271 834 aa23.28■■□□□ 1.32
PFDN6-201ENST00000374606 ADAMTS8Q9UP79 889 aa23.28■■□□□ 1.32
PFDN6-201ENST00000374606 STK32BQ9NY57 414 aa23.27■■□□□ 1.32
PFDN6-201ENST00000374606 PTGER2P43116 358 aa23.26■■□□□ 1.31
PFDN6-201ENST00000374606 LTV1Q96GA3 475 aaPredicted RBP23.26■■□□□ 1.31
PFDN6-201ENST00000374606 AXIN2Q9Y2T1 843 aa23.26■■□□□ 1.31
PFDN6-201ENST00000374606 TXNRD1Q16881 649 aa23.24■■□□□ 1.31
PFDN6-201ENST00000374606 ANKRD24Q8TF21 1146 aa23.24■■□□□ 1.31
PFDN6-201ENST00000374606 YTHDC1Q96MU7 727 aaKnown RBP23.24■■□□□ 1.31
PFDN6-201ENST00000374606 CARD10Q9BWT7 1032 aa23.24■■□□□ 1.31
PFDN6-201ENST00000374606 ATF5Q9Y2D1 282 aaPredicted RBP23.24■■□□□ 1.31
PFDN6-201ENST00000374606 RGPD2P0DJD1 1756 aa23.23■■□□□ 1.31
PFDN6-201ENST00000374606 CSB-PGBD3P0DP91 1061 aa23.23■■□□□ 1.31
PFDN6-201ENST00000374606 ERBB3P21860 1342 aa23.23■■□□□ 1.31
PFDN6-201ENST00000374606 SLC15A2Q16348 729 aa23.22■■□□□ 1.31
PFDN6-201ENST00000374606 ZNF784Q8NCA9 323 aaPredicted RBP23.22■■□□□ 1.31
PFDN6-201ENST00000374606 IGSF1Q8N6C5 1336 aa23.22■■□□□ 1.31
PFDN6-201ENST00000374606 EXOC5O00471 708 aa23.2■■□□□ 1.3
PFDN6-201ENST00000374606 FHDC1Q9C0D6 1143 aaPredicted RBP23.2■■□□□ 1.3
PFDN6-201ENST00000374606 MTFR1LQ9H019 292 aa23.2■■□□□ 1.3
PFDN6-201ENST00000374606 TNS2Q63HR2 1409 aa23.19■■□□□ 1.3
PFDN6-201ENST00000374606 HMOX1P09601 288 aa23.19■■□□□ 1.3
PFDN6-201ENST00000374606 CCDC146Q8IYE0 955 aa23.19■■□□□ 1.3
PFDN6-201ENST00000374606 EYA1Q99502 592 aa23.19■■□□□ 1.3
PFDN6-201ENST00000374606 SYT17Q9BSW7 474 aa23.19■■□□□ 1.3
PFDN6-201ENST00000374606 PNNQ9H307 717 aaKnown RBP23.19■■□□□ 1.3
PFDN6-201ENST00000374606 KDRP35968 1356 aa23.17■■□□□ 1.3
PFDN6-201ENST00000374606 NHSQ6T4R5 1651 aa23.17■■□□□ 1.3
PFDN6-201ENST00000374606 FCHSD2O94868 740 aa23.17■■□□□ 1.3
PFDN6-201ENST00000374606 HNRNPUQ00839 825 aaKnown RBP eCLIP23.17■■□□□ 1.3
PFDN6-201ENST00000374606 SULT6B1Q6IMI4 303 aa23.17■■□□□ 1.3
PFDN6-201ENST00000374606 RSPH6AQ9H0K4 717 aa23.17■■□□□ 1.3
PFDN6-201ENST00000374606 CHD4Q14839 1912 aa23.17■■□□□ 1.3
PFDN6-201ENST00000374606 NCAPD2Q15021 1401 aa23.16■■□□□ 1.3
PFDN6-201ENST00000374606 RUNDC1Q96C34 613 aa23.16■■□□□ 1.3
PFDN6-201ENST00000374606 MAPK8IP3Q9UPT6 1336 aa23.15■■□□□ 1.3
PFDN6-201ENST00000374606 NEFMP07197 916 aa23.15■■□□□ 1.3
PFDN6-201ENST00000374606 PRKAR2BP31323 418 aa23.15■■□□□ 1.3
PFDN6-201ENST00000374606 NBPF6Q5VWK0 638 aa23.15■■□□□ 1.3
PFDN6-201ENST00000374606 AEBP1Q8IUX7 1158 aa23.15■■□□□ 1.3
PFDN6-201ENST00000374606 NBPF4Q96M43 638 aa23.15■■□□□ 1.3
PFDN6-201ENST00000374606 SGIP1Q9BQI5 828 aa23.15■■□□□ 1.3
PFDN6-201ENST00000374606 UTRNP46939 3433 aa23.14■■□□□ 1.3
PFDN6-201ENST00000374606 NLRP2Q9NX02 1062 aa23.14■■□□□ 1.29
PFDN6-201ENST00000374606 USHBP1Q8N6Y0 703 aa23.13■■□□□ 1.29
PFDN6-201ENST00000374606 PLEKHF1Q96S99 279 aa23.12■■□□□ 1.29
PFDN6-201ENST00000374606 PAPPAQ13219 1627 aa23.11■■□□□ 1.29
PFDN6-201ENST00000374606 ARXQ96QS3 562 aa23.11■■□□□ 1.29
PFDN6-201ENST00000374606 MAP3K5Q99683 1374 aa23.11■■□□□ 1.29
PFDN6-201ENST00000374606 ACSBG1Q96GR2 724 aa23.09■■□□□ 1.29
PFDN6-201ENST00000374606 SENP3-EIF4A1A0A087X0R7 540 aa23.08■■□□□ 1.29
PFDN6-201ENST00000374606 APAF1O14727 1248 aa23.08■■□□□ 1.29
PFDN6-201ENST00000374606 BTAF1O14981 1849 aa23.07■■□□□ 1.28
PFDN6-201ENST00000374606 C1QTNF8P60827 252 aa23.06■■□□□ 1.28
PFDN6-201ENST00000374606 ZBED9Q6R2W3 1325 aa23.05■■□□□ 1.28
PFDN6-201ENST00000374606 IL2RBP14784 551 aa23.04■■□□□ 1.28
PFDN6-201ENST00000374606 NGEFQ8N5V2 710 aa23.04■■□□□ 1.28
PFDN6-201ENST00000374606 PHACTR3Q96KR7 559 aa23.04■■□□□ 1.28
PFDN6-201ENST00000374606 KAT6BQ8WYB5 2073 aa23.04■■□□□ 1.28
PFDN6-201ENST00000374606 MEGF6O75095 1541 aa23.03■■□□□ 1.28
PFDN6-201ENST00000374606 PLEKHG2Q9H7P9 1386 aa23.03■■□□□ 1.28
PFDN6-201ENST00000374606 ZNF827Q17R98 1081 aa23.03■■□□□ 1.28
PFDN6-201ENST00000374606 RAPGEF4Q8WZA2 1011 aa23.03■■□□□ 1.28
PFDN6-201ENST00000374606 DLG5Q8TDM6 1919 aa23.02■■□□□ 1.28
PFDN6-201ENST00000374606 TMPOP42166 694 aaKnown RBP23.02■■□□□ 1.28
PFDN6-201ENST00000374606 RRP7AQ9Y3A4 280 aaKnown RBP23.02■■□□□ 1.28
PFDN6-201ENST00000374606 SALL2Q9Y467 1007 aaPredicted RBP23.02■■□□□ 1.28
PFDN6-201ENST00000374606 NFE2L2Q16236 605 aa23.01■■□□□ 1.27
PFDN6-201ENST00000374606 GPR162Q16538 588 aa23.01■■□□□ 1.27
PFDN6-201ENST00000374606 PKD1L3Q7Z443 1732 aa23.01■■□□□ 1.27
PFDN6-201ENST00000374606 TATP17735 454 aaPredicted RBP23■■□□□ 1.27
PFDN6-201ENST00000374606 NEUROD2Q15784 382 aa23■■□□□ 1.27
PFDN6-201ENST00000374606 GAS2L2Q8NHY3 880 aa23■■□□□ 1.27
PFDN6-201ENST00000374606 SLC16A10Q8TF71 515 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms