RNA–Protein interactions for RNA: ENST00000373995.7

A1CF-203, Transcript of APOBEC1 complementation factor, humanhuman

TSL 2 BASIC

Gene A1CF, Length 2,211 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-203ENST00000373995 NBPF6Q5VWK0 638 aa16.45■□□□□ 0.22
A1CF-203ENST00000373995 NBPF4Q96M43 638 aa16.45■□□□□ 0.22
A1CF-203ENST00000373995 EYA1Q99502 592 aa16.45■□□□□ 0.22
A1CF-203ENST00000373995 ATRNO75882 1429 aa16.44■□□□□ 0.22
A1CF-203ENST00000373995 CSB-PGBD3P0DP91 1061 aa16.44■□□□□ 0.22
A1CF-203ENST00000373995 CARD10Q9BWT7 1032 aa16.43■□□□□ 0.22
A1CF-203ENST00000373995 RGS17Q9UGC6 210 aaPredicted RBP16.43■□□□□ 0.22
A1CF-203ENST00000373995 SPATA31A5Q5VU36 1347 aa16.43■□□□□ 0.22
A1CF-203ENST00000373995 SPATA31A7Q8IWB4 1347 aa16.43■□□□□ 0.22
A1CF-203ENST00000373995 ZNF772Q68DY9 489 aaPredicted RBP16.43■□□□□ 0.22
A1CF-203ENST00000373995 TOM1L2Q6ZVM7 507 aa16.43■□□□□ 0.22
A1CF-203ENST00000373995 MRS2Q9HD23 443 aa16.43■□□□□ 0.22
A1CF-203ENST00000373995 RGPD2P0DJD1 1756 aa16.43■□□□□ 0.22
A1CF-203ENST00000373995 SPATA31A1Q5TZJ5 1347 aa16.43■□□□□ 0.22
A1CF-203ENST00000373995 KDRP35968 1356 aa16.42■□□□□ 0.22
A1CF-203ENST00000373995 NLRP2Q9NX02 1062 aa16.42■□□□□ 0.22
A1CF-203ENST00000373995 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.42■□□□□ 0.22
A1CF-203ENST00000373995 TRPC5Q9UL62 973 aaPredicted RBP16.42■□□□□ 0.22
A1CF-203ENST00000373995 NUDCQ9Y266 331 aa16.41■□□□□ 0.22
A1CF-203ENST00000373995 PNISRQ8TF01 805 aaKnown RBP16.4■□□□□ 0.22
A1CF-203ENST00000373995 GLI3P10071 1580 aa16.4■□□□□ 0.22
A1CF-203ENST00000373995 QTRT2Q9H974 415 aaKnown RBP16.39■□□□□ 0.22
A1CF-203ENST00000373995 U2SURPO15042 1029 aaKnown RBP16.39■□□□□ 0.21
A1CF-203ENST00000373995 USHBP1Q8N6Y0 703 aa16.39■□□□□ 0.21
A1CF-203ENST00000373995 GJD4Q96KN9 370 aaPredicted RBP16.39■□□□□ 0.21
A1CF-203ENST00000373995 THRAP3Q9Y2W1 955 aaKnown RBP16.39■□□□□ 0.21
A1CF-203ENST00000373995 AEBP1Q8IUX7 1158 aa16.38■□□□□ 0.21
A1CF-203ENST00000373995 TCP11L2Q8N4U5 519 aa16.38■□□□□ 0.21
A1CF-203ENST00000373995 USP35Q9P2H5 1018 aa16.38■□□□□ 0.21
A1CF-203ENST00000373995 DISP2A7MBM2 1401 aa16.38■□□□□ 0.21
A1CF-203ENST00000373995 U2AF1L5P0DN76 240 aaPredicted RBP16.37■□□□□ 0.21
A1CF-203ENST00000373995 U2AF1Q01081 240 aaKnown RBP eCLIP16.37■□□□□ 0.21
A1CF-203ENST00000373995 SULT6B1Q6IMI4 303 aa16.37■□□□□ 0.21
A1CF-203ENST00000373995 BARGINQ6ZT62 677 aa16.37■□□□□ 0.21
A1CF-203ENST00000373995 PHF23Q9BUL5 403 aaPredicted RBP16.37■□□□□ 0.21
A1CF-203ENST00000373995 PLEKHG2Q9H7P9 1386 aa16.36■□□□□ 0.21
A1CF-203ENST00000373995 CCDC9Q9Y3X0 531 aaKnown RBP16.36■□□□□ 0.21
A1CF-203ENST00000373995 MEGF6O75095 1541 aa16.36■□□□□ 0.21
A1CF-203ENST00000373995 ONECUT3O60422 494 aaPredicted RBP16.35■□□□□ 0.21
A1CF-203ENST00000373995 FCHSD2O94868 740 aa16.35■□□□□ 0.21
A1CF-203ENST00000373995 HMOX1P09601 288 aa16.35■□□□□ 0.21
A1CF-203ENST00000373995 ADAMTS8Q9UP79 889 aa16.35■□□□□ 0.21
A1CF-203ENST00000373995 WNK3Q9BYP7 1800 aa16.35■□□□□ 0.21
A1CF-203ENST00000373995 WDR43Q15061 677 aaKnown RBP eCLIP16.35■□□□□ 0.21
A1CF-203ENST00000373995 POTEAQ6S8J7 498 aa16.35■□□□□ 0.21
A1CF-203ENST00000373995 RBM6P78332 1123 aaKnown RBP16.34■□□□□ 0.21
A1CF-203ENST00000373995 THSD7AQ9UPZ6 1657 aa16.34■□□□□ 0.21
A1CF-203ENST00000373995 OVOS2A0A0G2JMS6 1433 aa16.34■□□□□ 0.21
A1CF-203ENST00000373995 IL2RBP14784 551 aa16.33■□□□□ 0.2
A1CF-203ENST00000373995 CDCA7Q9BWT1 371 aaPredicted RBP16.33■□□□□ 0.2
A1CF-203ENST00000373995 PLEKHF1Q96S99 279 aa16.33■□□□□ 0.2
A1CF-203ENST00000373995 FAM98CQ17RN3 349 aaKnown RBP16.32■□□□□ 0.2
A1CF-203ENST00000373995 RAPGEF4Q8WZA2 1011 aa16.32■□□□□ 0.2
A1CF-203ENST00000373995 PARP4Q9UKK3 1724 aaKnown RBP16.32■□□□□ 0.2
A1CF-203ENST00000373995 PRKAR2BP31323 418 aa16.31■□□□□ 0.2
A1CF-203ENST00000373995 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.3■□□□□ 0.22e-8■■■■□ 21.1
A1CF-203ENST00000373995 TATP17735 454 aaPredicted RBP16.3■□□□□ 0.2
A1CF-203ENST00000373995 RXRBP28702 533 aa16.3■□□□□ 0.2
A1CF-203ENST00000373995 LRRC37A3O60309 1634 aa16.29■□□□□ 0.2
A1CF-203ENST00000373995 PKD1L3Q7Z443 1732 aa16.29■□□□□ 0.2
A1CF-203ENST00000373995 PHACTR3Q96KR7 559 aa16.29■□□□□ 0.2
A1CF-203ENST00000373995 FAM9BQ8IZU0 186 aa16.29■□□□□ 0.2
A1CF-203ENST00000373995 TNS2Q63HR2 1409 aa16.28■□□□□ 0.2
A1CF-203ENST00000373995 PLCB2Q00722 1185 aa16.28■□□□□ 0.2
A1CF-203ENST00000373995 PNNQ9H307 717 aaKnown RBP16.28■□□□□ 0.2
A1CF-203ENST00000373995 AMOTQ4VCS5 1084 aa16.27■□□□□ 0.19
A1CF-203ENST00000373995 SHANK3Q9BYB0 1731 aa16.27■□□□□ 0.19
A1CF-203ENST00000373995 RGS12O14924 1447 aa16.26■□□□□ 0.19
A1CF-203ENST00000373995 SEPT12Q8IYM1 358 aa16.26■□□□□ 0.19
A1CF-203ENST00000373995 VSIG10Q8N0Z9 540 aa16.26■□□□□ 0.19
A1CF-203ENST00000373995 RUNDC1Q96C34 613 aa16.26■□□□□ 0.19
A1CF-203ENST00000373995 DDB1Q16531 1140 aa16.26■□□□□ 0.19
A1CF-203ENST00000373995 CCDC146Q8IYE0 955 aa16.26■□□□□ 0.19
A1CF-203ENST00000373995 ZCRB1Q8TBF4 217 aaKnown RBP16.26■□□□□ 0.19
A1CF-203ENST00000373995 EXOC5O00471 708 aa16.25■□□□□ 0.19
A1CF-203ENST00000373995 MTHFSDQ2M296 383 aaKnown RBP16.25■□□□□ 0.19
A1CF-203ENST00000373995 PLEKHO1Q53GL0 409 aaPredicted RBP16.25■□□□□ 0.19
A1CF-203ENST00000373995 SPG7Q9UQ90 795 aa16.25■□□□□ 0.19
A1CF-203ENST00000373995 EP400Q96L91 3159 aa16.24■□□□□ 0.19
A1CF-203ENST00000373995 PCDH11XQ9BZA7 1347 aa16.24■□□□□ 0.19
A1CF-203ENST00000373995 PCDH11YQ9BZA8 1340 aa16.24■□□□□ 0.19
A1CF-203ENST00000373995 CYP27B1O15528 508 aa16.23■□□□□ 0.19
A1CF-203ENST00000373995 MAPK8IP3Q9UPT6 1336 aa16.23■□□□□ 0.19
A1CF-203ENST00000373995 GAS2L2Q8NHY3 880 aa16.23■□□□□ 0.19
A1CF-203ENST00000373995 A0A0G2JS52 829 aa16.22■□□□□ 0.19
A1CF-203ENST00000373995 HMGB1P09429 215 aaKnown RBP16.22■□□□□ 0.19
A1CF-203ENST00000373995 NEFMP07197 916 aa16.22■□□□□ 0.19
A1CF-203ENST00000373995 PHKG2P15735 406 aa16.21■□□□□ 0.19
A1CF-203ENST00000373995 ZNF530Q6P9A1 599 aaPredicted RBP16.21■□□□□ 0.19
A1CF-203ENST00000373995 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.21■□□□□ 0.19
A1CF-203ENST00000373995 MARCH10Q8NA82 808 aaPredicted RBP16.21■□□□□ 0.19
A1CF-203ENST00000373995 BRWD3Q6RI45 1802 aa16.21■□□□□ 0.18
A1CF-203ENST00000373995 APAF1O14727 1248 aa16.21■□□□□ 0.18
A1CF-203ENST00000373995 NFE2L2Q16236 605 aa16.21■□□□□ 0.18
A1CF-203ENST00000373995 TMPOP42166 694 aaKnown RBP16.2■□□□□ 0.18
A1CF-203ENST00000373995 NKX1-1Q15270 411 aaPredicted RBP16.2■□□□□ 0.18
A1CF-203ENST00000373995 IFNL2Q8IZJ0 200 aa16.2■□□□□ 0.18
A1CF-203ENST00000373995 PDE3BQ13370 1112 aa16.19■□□□□ 0.18
A1CF-203ENST00000373995 AKAP4Q5JQC9 854 aa16.19■□□□□ 0.18
A1CF-203ENST00000373995 DDX54Q8TDD1 881 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms