RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 KDRP35968 1356 aa24.88■■□□□ 1.57
CDX4-201ENST00000373514 U2SURPO15042 1029 aaKnown RBP24.87■■□□□ 1.57
CDX4-201ENST00000373514 HMOX1P09601 288 aa24.87■■□□□ 1.57
CDX4-201ENST00000373514 SULT6B1Q6IMI4 303 aa24.87■■□□□ 1.57
CDX4-201ENST00000373514 RAPGEF4Q8WZA2 1011 aa24.87■■□□□ 1.57
CDX4-201ENST00000373514 EP400Q96L91 3159 aa24.87■■□□□ 1.57
CDX4-201ENST00000373514 TATP17735 454 aaPredicted RBP24.86■■□□□ 1.57
CDX4-201ENST00000373514 TNS1Q9HBL0 1735 aaKnown RBP24.85■■□□□ 1.57
CDX4-201ENST00000373514 TOGARAM1Q9Y4F4 1720 aa24.85■■□□□ 1.57
CDX4-201ENST00000373514 PDE3BQ13370 1112 aa24.84■■□□□ 1.57
CDX4-201ENST00000373514 EXOC5O00471 708 aa24.83■■□□□ 1.57
CDX4-201ENST00000373514 MARCH10Q8NA82 808 aaPredicted RBP24.83■■□□□ 1.57
CDX4-201ENST00000373514 CCDC184Q52MB2 194 aa24.82■■□□□ 1.56
CDX4-201ENST00000373514 NHSQ6T4R5 1651 aa24.81■■□□□ 1.56
CDX4-201ENST00000373514 ZCRB1Q8TBF4 217 aaKnown RBP24.8■■□□□ 1.56
CDX4-201ENST00000373514 U2AF1L5P0DN76 240 aaPredicted RBP24.79■■□□□ 1.56
CDX4-201ENST00000373514 U2AF1Q01081 240 aaKnown RBP eCLIP24.79■■□□□ 1.56
CDX4-201ENST00000373514 NUDCQ9Y266 331 aa24.79■■□□□ 1.56
CDX4-201ENST00000373514 KAT6BQ8WYB5 2073 aa24.79■■□□□ 1.56
CDX4-201ENST00000373514 ITGB4P16144 1822 aa24.78■■□□□ 1.56
CDX4-201ENST00000373514 DDX54Q8TDD1 881 aaKnown RBP24.78■■□□□ 1.56
CDX4-201ENST00000373514 DLG5Q8TDM6 1919 aa24.78■■□□□ 1.56
CDX4-201ENST00000373514 PCDH11XQ9BZA7 1347 aa24.77■■□□□ 1.56
CDX4-201ENST00000373514 PCDH11YQ9BZA8 1340 aa24.77■■□□□ 1.56
CDX4-201ENST00000373514 RSPH6AQ9H0K4 717 aa24.76■■□□□ 1.55
CDX4-201ENST00000373514 PLEKHG2Q9H7P9 1386 aa24.75■■□□□ 1.55
CDX4-201ENST00000373514 SCN11AQ9UI33 1791 aa24.75■■□□□ 1.55
CDX4-201ENST00000373514 CYP27B1O15528 508 aa24.75■■□□□ 1.55
CDX4-201ENST00000373514 BTAF1O14981 1849 aa24.74■■□□□ 1.55
CDX4-201ENST00000373514 PRKAR2BP31323 418 aa24.74■■□□□ 1.55
CDX4-201ENST00000373514 SPG7Q9UQ90 795 aa24.73■■□□□ 1.55
CDX4-201ENST00000373514 BCL9O00512 1426 aa24.72■■□□□ 1.55
CDX4-201ENST00000373514 FAM196AQ6ZSG2 479 aa24.71■■□□□ 1.55
CDX4-201ENST00000373514 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.71■■□□□ 1.55
CDX4-201ENST00000373514 PLEKHO1Q53GL0 409 aaPredicted RBP24.7■■□□□ 1.54
CDX4-201ENST00000373514 ZNF530Q6P9A1 599 aaPredicted RBP24.7■■□□□ 1.54
CDX4-201ENST00000373514 ACSBG1Q96GR2 724 aa24.7■■□□□ 1.54
CDX4-201ENST00000373514 MRS2Q9HD23 443 aa24.7■■□□□ 1.54
CDX4-201ENST00000373514 ADAMTS7Q9UKP4 1686 aa24.69■■□□□ 1.54
CDX4-201ENST00000373514 UPF1Q92900 1129 aaKnown RBP eCLIP24.69■■□□□ 1.54
CDX4-201ENST00000373514 PHACTR3Q96KR7 559 aa24.69■■□□□ 1.54
CDX4-201ENST00000373514 TRIM37O94972 964 aa24.68■■□□□ 1.54
CDX4-201ENST00000373514 PHKG2P15735 406 aa24.68■■□□□ 1.54
CDX4-201ENST00000373514 MTHFSDQ2M296 383 aaKnown RBP24.68■■□□□ 1.54
CDX4-201ENST00000373514 PTF1AQ7RTS3 328 aa24.68■■□□□ 1.54
CDX4-201ENST00000373514 KDM6AO15550 1401 aaPredicted RBP24.68■■□□□ 1.54
CDX4-201ENST00000373514 FCHSD2O94868 740 aa24.67■■□□□ 1.54
CDX4-201ENST00000373514 WDR43Q15061 677 aaKnown RBP eCLIP24.67■■□□□ 1.54
CDX4-201ENST00000373514 AMOTQ4VCS5 1084 aa24.67■■□□□ 1.54
CDX4-201ENST00000373514 IFNL2Q8IZJ0 200 aa24.66■■□□□ 1.54
CDX4-201ENST00000373514 KCNQ2O43526 872 aa24.65■■□□□ 1.54
CDX4-201ENST00000373514 ADAMTS8Q9UP79 889 aa24.65■■□□□ 1.54
CDX4-201ENST00000373514 SOCS7O14512 581 aa24.64■■□□□ 1.53
CDX4-201ENST00000373514 CCDC146Q8IYE0 955 aa24.64■■□□□ 1.53
CDX4-201ENST00000373514 PLEKHF1Q96S99 279 aa24.64■■□□□ 1.53
CDX4-201ENST00000373514 RGPD3A6NKT7 1758 aaPredicted RBP24.63■■□□□ 1.53
CDX4-201ENST00000373514 SIPA1L3O60292 1781 aaPredicted RBP24.63■■□□□ 1.53
CDX4-201ENST00000373514 RGPD4Q7Z3J3 1758 aa24.63■■□□□ 1.53
CDX4-201ENST00000373514 C1orf141Q5JVX7 400 aa24.62■■□□□ 1.53
CDX4-201ENST00000373514 RREB1Q92766 1687 aa24.62■■□□□ 1.53
CDX4-201ENST00000373514 NKX1-1Q15270 411 aaPredicted RBP24.61■■□□□ 1.53
CDX4-201ENST00000373514 CCER2I3L3R5 266 aa24.61■■□□□ 1.53
CDX4-201ENST00000373514 MAP3K5Q99683 1374 aa24.6■■□□□ 1.53
CDX4-201ENST00000373514 AKAP4Q5JQC9 854 aa24.6■■□□□ 1.53
CDX4-201ENST00000373514 MPRIPQ6WCQ1 1025 aa24.6■■□□□ 1.53
CDX4-201ENST00000373514 SYTL4Q96C24 671 aaPredicted RBP24.6■■□□□ 1.53
CDX4-201ENST00000373514 LY75O60449 1722 aa24.59■■□□□ 1.53
CDX4-201ENST00000373514 PRIM1P49642 420 aaKnown RBP24.59■■□□□ 1.53
CDX4-201ENST00000373514 GAS2L2Q8NHY3 880 aa24.59■■□□□ 1.53
CDX4-201ENST00000373514 MRC1P22897 1456 aa24.59■■□□□ 1.53
CDX4-201ENST00000373514 PNISRQ8TF01 805 aaKnown RBP24.58■■□□□ 1.53
CDX4-201ENST00000373514 PAPPAQ13219 1627 aa24.58■■□□□ 1.53
CDX4-201ENST00000373514 MAPK8IP3Q9UPT6 1336 aa24.58■■□□□ 1.53
CDX4-201ENST00000373514 NUP188Q5SRE5 1749 aa24.58■■□□□ 1.52
CDX4-201ENST00000373514 BCL11BQ9C0K0 894 aaPredicted RBP24.57■■□□□ 1.52
CDX4-201ENST00000373514 DEFB132Q7Z7B7 95 aa24.56■■□□□ 1.52
CDX4-201ENST00000373514 DCAF5Q96JK2 942 aa24.56■■□□□ 1.52
CDX4-201ENST00000373514 SF3B2Q13435 895 aaKnown RBP24.55■■□□□ 1.52
CDX4-201ENST00000373514 LGR6Q9HBX8 967 aa24.55■■□□□ 1.52
CDX4-201ENST00000373514 APBA3O96018 575 aa24.54■■□□□ 1.52
CDX4-201ENST00000373514 HSP90AB1P08238 724 aaKnown RBP24.54■■□□□ 1.52
CDX4-201ENST00000373514 NEFMP07197 916 aa24.53■■□□□ 1.52
CDX4-201ENST00000373514 PNNQ9H307 717 aaKnown RBP24.53■■□□□ 1.52
CDX4-201ENST00000373514 GNAT3A8MTJ3 354 aa24.52■■□□□ 1.52
CDX4-201ENST00000373514 RNMTO43148 476 aaKnown RBP24.52■■□□□ 1.52
CDX4-201ENST00000373514 CCDC125Q86Z20 511 aa24.52■■□□□ 1.52
CDX4-201ENST00000373514 RUNDC1Q96C34 613 aa24.52■■□□□ 1.52
CDX4-201ENST00000373514 SENP3-EIF4A1A0A087X0R7 540 aa24.51■■□□□ 1.51
CDX4-201ENST00000373514 NFE2L2Q16236 605 aa24.51■■□□□ 1.51
CDX4-201ENST00000373514 FAM9BQ8IZU0 186 aa24.51■■□□□ 1.51
CDX4-201ENST00000373514 RRP7AQ9Y3A4 280 aaKnown RBP24.51■■□□□ 1.51
CDX4-201ENST00000373514 EN1Q05925 392 aaPredicted RBP24.51■■□□□ 1.51
CDX4-201ENST00000373514 UBR2Q8IWV8 1755 aa24.5■■□□□ 1.51
CDX4-201ENST00000373514 BAG6P46379 1132 aa24.5■■□□□ 1.51
CDX4-201ENST00000373514 PIGBQ92521 554 aa24.5■■□□□ 1.51
CDX4-201ENST00000373514 TMOD3Q9NYL9 352 aa24.5■■□□□ 1.51
CDX4-201ENST00000373514 TAF1LQ8IZX4 1826 aa24.49■■□□□ 1.51
CDX4-201ENST00000373514 DCTN1Q14203 1278 aa24.49■■□□□ 1.51
CDX4-201ENST00000373514 MCM10Q7L590 875 aa24.49■■□□□ 1.51
CDX4-201ENST00000373514 IL17REQ8NFR9 667 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms