RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 ANKRD62A6NC57 917 aa8.2□□□□□ -1.1
CSMD2-206ENST00000373388 FIBPO43427 364 aa8.2□□□□□ -1.1
CSMD2-206ENST00000373388 BCL2L13Q9BXK5 485 aa8.2□□□□□ -1.1
CSMD2-206ENST00000373388 RABGAP1Q9Y3P9 1069 aa8.2□□□□□ -1.1
CSMD2-206ENST00000373388 TACO1Q9BSH4 297 aaKnown RBP8.2□□□□□ -1.1
CSMD2-206ENST00000373388 OTUD6BQ8N6M0 293 aa8.2□□□□□ -1.1
CSMD2-206ENST00000373388 CCDC7Q96M83 1385 aa8.2□□□□□ -1.1
CSMD2-206ENST00000373388 EIF5P55010 431 aaKnown RBP8.2□□□□□ -1.1
CSMD2-206ENST00000373388 LACTBP83111 547 aaPredicted RBP8.2□□□□□ -1.1
CSMD2-206ENST00000373388 VCX3BQ9H321 246 aa8.19□□□□□ -1.1
CSMD2-206ENST00000373388 HYPKQ9NX55 129 aa8.19□□□□□ -1.1
CSMD2-206ENST00000373388 PPFIA3O75145 1194 aa8.19□□□□□ -1.1
CSMD2-206ENST00000373388 STMN1P16949 149 aa8.19□□□□□ -1.1
CSMD2-206ENST00000373388 CCDC174Q6PII3 467 aa8.19□□□□□ -1.1
CSMD2-206ENST00000373388 CACNA2D3Q8IZS8 1091 aa8.19□□□□□ -1.1
CSMD2-206ENST00000373388 MICALL1Q8N3F8 863 aa8.19□□□□□ -1.1
CSMD2-206ENST00000373388 WDR63Q8IWG1 891 aa8.19□□□□□ -1.1
CSMD2-206ENST00000373388 API5Q9BZZ5 524 aaKnown RBP8.19□□□□□ -1.1
CSMD2-206ENST00000373388 BRD4O60885 1362 aaPredicted RBP8.19□□□□□ -1.1
CSMD2-206ENST00000373388 RNF8O76064 485 aa8.19□□□□□ -1.1
CSMD2-206ENST00000373388 NUTM2DQ5VT03 806 aaPredicted RBP8.19□□□□□ -1.1
CSMD2-206ENST00000373388 VPS36Q86VN1 386 aa8.19□□□□□ -1.1
CSMD2-206ENST00000373388 UTP14CQ5TAP6 766 aaKnown RBP8.19□□□□□ -1.1
CSMD2-206ENST00000373388 CKAP4Q07065 602 aaKnown RBP8.19□□□□□ -1.1
CSMD2-206ENST00000373388 HDGFL2Q7Z4V5 671 aaPredicted RBP8.19□□□□□ -1.1
CSMD2-206ENST00000373388 SCAND2PQ9GZW5 306 aaPredicted RBP8.19□□□□□ -1.1
CSMD2-206ENST00000373388 ATAD2Q6PL18 1390 aa8.18□□□□□ -1.1
CSMD2-206ENST00000373388 SYCE3A1L190 88 aa8.18□□□□□ -1.1
CSMD2-206ENST00000373388 VPS53Q5VIR6 699 aa8.18□□□□□ -1.1
CSMD2-206ENST00000373388 CEP135Q66GS9 1140 aa8.18□□□□□ -1.1
CSMD2-206ENST00000373388 ZNF853P0CG23 659 aa8.18□□□□□ -1.1
CSMD2-206ENST00000373388 RPAINQ86UA6 219 aa8.18□□□□□ -1.1
CSMD2-206ENST00000373388 SPA17Q15506 151 aa8.18□□□□□ -1.1
CSMD2-206ENST00000373388 SPATS2Q86XZ4 545 aaKnown RBP8.18□□□□□ -1.1
CSMD2-206ENST00000373388 CCDC110Q8TBZ0 833 aa8.18□□□□□ -1.1
CSMD2-206ENST00000373388 CEP104O60308 925 aa8.18□□□□□ -1.1
CSMD2-206ENST00000373388 NBPF11Q86T75 865 aa8.18□□□□□ -1.1
CSMD2-206ENST00000373388 CLIP2Q9UDT6 1046 aa8.18□□□□□ -1.1
CSMD2-206ENST00000373388 ATP11AP98196 1134 aa8.18□□□□□ -1.1
CSMD2-206ENST00000373388 SCLT1Q96NL6 688 aa8.18□□□□□ -1.1
CSMD2-206ENST00000373388 DHX29Q7Z478 1369 aaKnown RBP8.18□□□□□ -1.1
CSMD2-206ENST00000373388 HSF2BPO75031 334 aa8.18□□□□□ -1.1
CSMD2-206ENST00000373388 CCDC160A6NGH7 325 aa8.18□□□□□ -1.1
CSMD2-206ENST00000373388 CETN2P41208 172 aa8.17□□□□□ -1.1
CSMD2-206ENST00000373388 C10orf67Q8IYJ2 551 aa8.17□□□□□ -1.1
CSMD2-206ENST00000373388 AMOTL1Q8IY63 956 aa8.17□□□□□ -1.1
CSMD2-206ENST00000373388 SMG6Q86US8 1419 aaKnown RBP8.17□□□□□ -1.1
CSMD2-206ENST00000373388 CCDC114Q96M63 670 aa8.17□□□□□ -1.1
CSMD2-206ENST00000373388 GBP1P32455 592 aa8.17□□□□□ -1.1
CSMD2-206ENST00000373388 ARFGAP2Q8N6H7 521 aa8.17□□□□□ -1.1
CSMD2-206ENST00000373388 BUB1BO60566 1050 aaPredicted RBP8.17□□□□□ -1.1
CSMD2-206ENST00000373388 RLBP1P12271 317 aa8.17□□□□□ -1.1
CSMD2-206ENST00000373388 DESP17661 470 aa8.17□□□□□ -1.1
CSMD2-206ENST00000373388 CCDC40Q4G0X9 1142 aa8.17□□□□□ -1.1
CSMD2-206ENST00000373388 ERICH2A1L162 156 aa8.17□□□□□ -1.1
CSMD2-206ENST00000373388 SLC8A1P32418 973 aa8.17□□□□□ -1.1
CSMD2-206ENST00000373388 NLRP5P59047 1200 aa8.17□□□□□ -1.1
CSMD2-206ENST00000373388 STK38Q15208 465 aa8.17□□□□□ -1.1
CSMD2-206ENST00000373388 SPDYE4A6NLX3 237 aa8.17□□□□□ -1.1
CSMD2-206ENST00000373388 RALYLQ86SE5 291 aaKnown RBP8.17□□□□□ -1.1
CSMD2-206ENST00000373388 PAFAH1B1P43034 410 aa8.17□□□□□ -1.1
CSMD2-206ENST00000373388 CCDC30Q5VVM6 783 aa8.17□□□□□ -1.1
CSMD2-206ENST00000373388 FBXW7Q969H0 707 aa8.17□□□□□ -1.1
CSMD2-206ENST00000373388 NEBLO76041 1014 aa8.17□□□□□ -1.1
CSMD2-206ENST00000373388 GCKP35557 465 aa8.17□□□□□ -1.1
CSMD2-206ENST00000373388 GRIPAP1Q4V328 841 aa8.17□□□□□ -1.1
CSMD2-206ENST00000373388 CCDC65Q8IXS2 484 aa8.17□□□□□ -1.1
CSMD2-206ENST00000373388 SNW1Q13573 536 aaKnown RBP8.17□□□□□ -1.1
CSMD2-206ENST00000373388 ZFYVE27Q5T4F4 411 aa8.17□□□□□ -1.1
CSMD2-206ENST00000373388 PPP6R1Q9UPN7 881 aa8.17□□□□□ -1.1
CSMD2-206ENST00000373388 SMC6Q96SB8 1091 aa8.16□□□□□ -1.1
CSMD2-206ENST00000373388 DDX23Q9BUQ8 820 aaKnown RBP8.16□□□□□ -1.1
CSMD2-206ENST00000373388 EFCC1Q9HA90 598 aa8.16□□□□□ -1.1
CSMD2-206ENST00000373388 PDE3AQ14432 1141 aa8.16□□□□□ -1.1
CSMD2-206ENST00000373388 MAP3K9P80192 1104 aa8.16□□□□□ -1.1
CSMD2-206ENST00000373388 SREK1Q8WXA9 508 aaKnown RBP8.16□□□□□ -1.1
CSMD2-206ENST00000373388 MPHOSPH9Q99550 1183 aa8.16□□□□□ -1.1
CSMD2-206ENST00000373388 NBPF8Q3BBV2 869 aa8.16□□□□□ -1.1
CSMD2-206ENST00000373388 ERCC3P19447 782 aa8.16□□□□□ -1.1
CSMD2-206ENST00000373388 SART3Q15020 963 aaKnown RBP8.16□□□□□ -1.1
CSMD2-206ENST00000373388 CCDC43Q96MW1 224 aaKnown RBP8.16□□□□□ -1.1
CSMD2-206ENST00000373388 ZKSCAN5Q9Y2L8 839 aa8.16□□□□□ -1.1
CSMD2-206ENST00000373388 CCDC172P0C7W6 258 aa8.16□□□□□ -1.1
CSMD2-206ENST00000373388 USO1O60763 962 aaKnown RBP8.16□□□□□ -1.1
CSMD2-206ENST00000373388 CEP120Q8N960 986 aa8.16□□□□□ -1.1
CSMD2-206ENST00000373388 TERF2IPQ9NYB0 399 aa8.16□□□□□ -1.1
CSMD2-206ENST00000373388 ME1P48163 572 aa8.16□□□□□ -1.1
CSMD2-206ENST00000373388 PDCD7Q8N8D1 485 aaKnown RBP8.16□□□□□ -1.1
CSMD2-206ENST00000373388 SATB2Q9UPW6 733 aa8.16□□□□□ -1.1
CSMD2-206ENST00000373388 PIP4K2BP78356 416 aa8.16□□□□□ -1.1
CSMD2-206ENST00000373388 SPATA32Q96LK8 384 aa8.15□□□□□ -1.1
CSMD2-206ENST00000373388 ANO10Q9NW15 660 aa8.15□□□□□ -1.1
CSMD2-206ENST00000373388 DNAJC8O75937 253 aaPredicted RBP8.15□□□□□ -1.1
CSMD2-206ENST00000373388 FAM76AQ8TAV0 307 aa8.15□□□□□ -1.1
CSMD2-206ENST00000373388 KIF4BQ2VIQ3 1234 aa8.15□□□□□ -1.1
CSMD2-206ENST00000373388 NUCKS1Q9H1E3 243 aaKnown RBP8.15□□□□□ -1.1
CSMD2-206ENST00000373388 SAMD15Q9P1V8 674 aa8.15□□□□□ -1.1
CSMD2-206ENST00000373388 CCDC196A0A1B0GTZ2 297 aa8.15□□□□□ -1.1
CSMD2-206ENST00000373388 KLHL40Q2TBA0 621 aa8.15□□□□□ -1.1
CSMD2-206ENST00000373388 RPUSD2Q8IZ73 545 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms