RNA–Protein interactions for RNA: ENST00000371750.9

TTC39A-204, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39A, Length 2,021 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-204ENST00000371750 SENP3-EIF4A1A0A087X0R7 540 aa17.35■□□□□ 0.37
TTC39A-204ENST00000371750 TATP17735 454 aaPredicted RBP17.35■□□□□ 0.37
TTC39A-204ENST00000371750 RUNDC1Q96C34 613 aa17.35■□□□□ 0.37
TTC39A-204ENST00000371750 THRAP3Q9Y2W1 955 aaKnown RBP17.35■□□□□ 0.37
TTC39A-204ENST00000371750 MAPK8IP3Q9UPT6 1336 aa17.35■□□□□ 0.37
TTC39A-204ENST00000371750 FAM98CQ17RN3 349 aaKnown RBP17.34■□□□□ 0.37
TTC39A-204ENST00000371750 DLG5Q8TDM6 1919 aa17.34■□□□□ 0.37
TTC39A-204ENST00000371750 TNS2Q63HR2 1409 aa17.33■□□□□ 0.37
TTC39A-204ENST00000371750 PLEKHG2Q9H7P9 1386 aa17.33■□□□□ 0.37
TTC39A-204ENST00000371750 BARGINQ6ZT62 677 aa17.33■□□□□ 0.37
TTC39A-204ENST00000371750 PNNQ9H307 717 aaKnown RBP17.33■□□□□ 0.36
TTC39A-204ENST00000371750 NEFMP07197 916 aa17.31■□□□□ 0.36
TTC39A-204ENST00000371750 MTHFSDQ2M296 383 aaKnown RBP17.31■□□□□ 0.36
TTC39A-204ENST00000371750 APAF1O14727 1248 aa17.3■□□□□ 0.36
TTC39A-204ENST00000371750 RRP7AQ9Y3A4 280 aaKnown RBP17.3■□□□□ 0.36
TTC39A-204ENST00000371750 POTEAQ6S8J7 498 aa17.3■□□□□ 0.36
TTC39A-204ENST00000371750 CDCA7Q9BWT1 371 aaPredicted RBP17.3■□□□□ 0.36
TTC39A-204ENST00000371750 A0A0G2JS52 829 aa17.29■□□□□ 0.36
TTC39A-204ENST00000371750 MYT1Q01538 1121 aa17.29■□□□□ 0.36
TTC39A-204ENST00000371750 PLEKHO1Q53GL0 409 aaPredicted RBP17.29■□□□□ 0.36
TTC39A-204ENST00000371750 VIRMAQ69YN4 1812 aaKnown RBP17.29■□□□□ 0.36
TTC39A-204ENST00000371750 RBM6P78332 1123 aaKnown RBP17.28■□□□□ 0.36
TTC39A-204ENST00000371750 ZNF530Q6P9A1 599 aaPredicted RBP17.28■□□□□ 0.36
TTC39A-204ENST00000371750 BRWD3Q6RI45 1802 aa17.28■□□□□ 0.36
TTC39A-204ENST00000371750 NFE2L2Q16236 605 aa17.28■□□□□ 0.36
TTC39A-204ENST00000371750 AMOTQ4VCS5 1084 aa17.28■□□□□ 0.36
TTC39A-204ENST00000371750 ZCRB1Q8TBF4 217 aaKnown RBP17.28■□□□□ 0.36
TTC39A-204ENST00000371750 SPG7Q9UQ90 795 aa17.28■□□□□ 0.36
TTC39A-204ENST00000371750 PCDH11XQ9BZA7 1347 aa17.27■□□□□ 0.36
TTC39A-204ENST00000371750 PCDH11YQ9BZA8 1340 aa17.27■□□□□ 0.36
TTC39A-204ENST00000371750 RGS12O14924 1447 aa17.27■□□□□ 0.36
TTC39A-204ENST00000371750 TMPOP42166 694 aaKnown RBP17.27■□□□□ 0.36
TTC39A-204ENST00000371750 GAS2L2Q8NHY3 880 aa17.27■□□□□ 0.36
TTC39A-204ENST00000371750 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.27■□□□□ 0.36
TTC39A-204ENST00000371750 NEUROD2Q15784 382 aa17.26■□□□□ 0.35
TTC39A-204ENST00000371750 DDB1Q16531 1140 aa17.26■□□□□ 0.35
TTC39A-204ENST00000371750 MAP3K5Q99683 1374 aa17.26■□□□□ 0.35
TTC39A-204ENST00000371750 TOGARAM1Q9Y4F4 1720 aa17.26■□□□□ 0.35
TTC39A-204ENST00000371750 ADAMTS7Q9UKP4 1686 aa17.26■□□□□ 0.35
TTC39A-204ENST00000371750 CYP27B1O15528 508 aa17.25■□□□□ 0.35
TTC39A-204ENST00000371750 HNRNPUQ00839 825 aaKnown RBP eCLIP17.25■□□□□ 0.35
TTC39A-204ENST00000371750 YTHDC1Q96MU7 727 aaKnown RBP17.25■□□□□ 0.35
TTC39A-204ENST00000371750 ONECUT3O60422 494 aaPredicted RBP17.25■□□□□ 0.35
TTC39A-204ENST00000371750 RXRBP28702 533 aa17.25■□□□□ 0.35
TTC39A-204ENST00000371750 SEPT12Q8IYM1 358 aa17.25■□□□□ 0.35
TTC39A-204ENST00000371750 SALL2Q9Y467 1007 aaPredicted RBP17.25■□□□□ 0.35
TTC39A-204ENST00000371750 SCN11AQ9UI33 1791 aa17.24■□□□□ 0.35
TTC39A-204ENST00000371750 EXOC5O00471 708 aa17.24■□□□□ 0.35
TTC39A-204ENST00000371750 PHKG2P15735 406 aa17.24■□□□□ 0.35
TTC39A-204ENST00000371750 KDM6AO15550 1401 aaPredicted RBP17.24■□□□□ 0.35
TTC39A-204ENST00000371750 DOT1LQ8TEK3 1739 aa17.24■□□□□ 0.35
TTC39A-204ENST00000371750 RIPK4P57078 832 aa17.23■□□□□ 0.35
TTC39A-204ENST00000371750 C1orf141Q5JVX7 400 aa17.23■□□□□ 0.35
TTC39A-204ENST00000371750 DDX54Q8TDD1 881 aaKnown RBP17.23■□□□□ 0.35
TTC39A-204ENST00000371750 AKAP4Q5JQC9 854 aa17.23■□□□□ 0.35
TTC39A-204ENST00000371750 IFNL2Q8IZJ0 200 aa17.22■□□□□ 0.35
TTC39A-204ENST00000371750 TRIM35Q9UPQ4 493 aa17.21■□□□□ 0.35
TTC39A-204ENST00000371750 GNAT3A8MTJ3 354 aa17.21■□□□□ 0.35
TTC39A-204ENST00000371750 MARCH10Q8NA82 808 aaPredicted RBP17.21■□□□□ 0.35
TTC39A-204ENST00000371750 DCTN1Q14203 1278 aa17.2■□□□□ 0.34
TTC39A-204ENST00000371750 SIPA1L3O60292 1781 aaPredicted RBP17.2■□□□□ 0.34
TTC39A-204ENST00000371750 MPRIPQ6WCQ1 1025 aa17.2■□□□□ 0.34
TTC39A-204ENST00000371750 MCM10Q7L590 875 aa17.2■□□□□ 0.34
TTC39A-204ENST00000371750 THUMPD2Q9BTF0 503 aaKnown RBP17.2■□□□□ 0.34
TTC39A-204ENST00000371750 MRC1P22897 1456 aa17.19■□□□□ 0.34
TTC39A-204ENST00000371750 LMOD3Q0VAK6 560 aa17.18■□□□□ 0.34
TTC39A-204ENST00000371750 PDE3BQ13370 1112 aa17.18■□□□□ 0.34
TTC39A-204ENST00000371750 CCDC27Q2M243 656 aa17.18■□□□□ 0.34
TTC39A-204ENST00000371750 RTF1Q92541 710 aaKnown RBP17.18■□□□□ 0.34
TTC39A-204ENST00000371750 CEMIPQ8WUJ3 1361 aa17.17■□□□□ 0.34
TTC39A-204ENST00000371750 NKX1-1Q15270 411 aaPredicted RBP17.17■□□□□ 0.34
TTC39A-204ENST00000371750 FAM182BQ5T319 152 aa17.17■□□□□ 0.34
TTC39A-204ENST00000371750 WWC1Q8IX03 1113 aa17.17■□□□□ 0.34
TTC39A-204ENST00000371750 LGR6Q9HBX8 967 aa17.17■□□□□ 0.34
TTC39A-204ENST00000371750 ITGB4P16144 1822 aa17.17■□□□□ 0.34
TTC39A-204ENST00000371750 ZNF521Q96K83 1311 aa17.16■□□□□ 0.34
TTC39A-204ENST00000371750 RNMTO43148 476 aaKnown RBP17.16■□□□□ 0.34
TTC39A-204ENST00000371750 HTATSF1O43719 755 aaKnown RBP17.16■□□□□ 0.34
TTC39A-204ENST00000371750 NCBP3Q53F19 620 aaKnown RBP17.16■□□□□ 0.34
TTC39A-204ENST00000371750 IL17REQ8NFR9 667 aa17.16■□□□□ 0.34
TTC39A-204ENST00000371750 DCAF5Q96JK2 942 aa17.16■□□□□ 0.34
TTC39A-204ENST00000371750 ZBED9Q6R2W3 1325 aa17.16■□□□□ 0.34
TTC39A-204ENST00000371750 NHSQ6T4R5 1651 aa17.16■□□□□ 0.34
TTC39A-204ENST00000371750 HSP90AB1P08238 724 aaKnown RBP17.16■□□□□ 0.34
TTC39A-204ENST00000371750 KRT27Q7Z3Y8 459 aa17.15■□□□□ 0.34
TTC39A-204ENST00000371750 NGEFQ8N5V2 710 aa17.15■□□□□ 0.34
TTC39A-204ENST00000371750 SBF2Q86WG5 1849 aa17.15■□□□□ 0.34
TTC39A-204ENST00000371750 PAPPAQ13219 1627 aa17.14■□□□□ 0.33
TTC39A-204ENST00000371750 KDM3BQ7LBC6 1761 aa17.13■□□□□ 0.33
TTC39A-204ENST00000371750 BCL9O00512 1426 aa17.13■□□□□ 0.33
TTC39A-204ENST00000371750 EP400Q96L91 3159 aa17.12■□□□□ 0.33
TTC39A-204ENST00000371750 ACSBG1Q96GR2 724 aa17.11■□□□□ 0.33
TTC39A-204ENST00000371750 SLC52A2Q9HAB3 445 aa17.11■□□□□ 0.33
TTC39A-204ENST00000371750 TEFQ10587 303 aa17.1■□□□□ 0.33
TTC39A-204ENST00000371750 WDR63Q8IWG1 891 aa17.09■□□□□ 0.33
TTC39A-204ENST00000371750 SPINK5Q9NQ38 1064 aaPredicted RBP17.09■□□□□ 0.33
TTC39A-204ENST00000371750 BTAF1O14981 1849 aa17.09■□□□□ 0.33
TTC39A-204ENST00000371750 ERVV-2B6SEH9 535 aa17.09■□□□□ 0.33
TTC39A-204ENST00000371750 CABP4P57796 275 aa17.09■□□□□ 0.33
TTC39A-204ENST00000371750 CALD1Q05682 793 aaKnown RBP17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms