RNA–Protein interactions for RNA: ENST00000371569.6

UBE2A-203, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 1 (best)

Gene UBE2A, Length 2,643 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-203ENST00000371569 MTMR7Q9Y216 660 aa2.96□□□□□ -1.94
UBE2A-203ENST00000371569 PTPRTO14522 1441 aa2.96□□□□□ -1.94
UBE2A-203ENST00000371569 PIK3R2O00459 728 aa2.96□□□□□ -1.94
UBE2A-203ENST00000371569 KRTAP5-9P26371 169 aa2.96□□□□□ -1.94
UBE2A-203ENST00000371569 PRELPP51888 382 aa2.96□□□□□ -1.94
UBE2A-203ENST00000371569 SVOPQ8N4V2 548 aa2.96□□□□□ -1.94
UBE2A-203ENST00000371569 PBXIP1Q96AQ6 731 aa2.96□□□□□ -1.94
UBE2A-203ENST00000371569 SPOCK3Q9BQ16 436 aa2.96□□□□□ -1.94
UBE2A-203ENST00000371569 PRDM9Q9NQV7 894 aa2.96□□□□□ -1.94
UBE2A-203ENST00000371569 SOS2Q07890 1332 aaPredicted RBP2.95□□□□□ -1.94
UBE2A-203ENST00000371569 BMP1P13497 986 aa2.95□□□□□ -1.94
UBE2A-203ENST00000371569 TIMP2P16035 220 aa2.95□□□□□ -1.94
UBE2A-203ENST00000371569 SRSF11Q05519 484 aaKnown RBP2.95□□□□□ -1.94
UBE2A-203ENST00000371569 NNTQ13423 1086 aa2.95□□□□□ -1.94
UBE2A-203ENST00000371569 WASHC4Q2M389 1173 aa2.95□□□□□ -1.94
UBE2A-203ENST00000371569 RIC3Q7Z5B4 369 aa2.95□□□□□ -1.94
UBE2A-203ENST00000371569 CCDC24Q8N4L8 307 aa2.95□□□□□ -1.94
UBE2A-203ENST00000371569 MTMR14Q8NCE2 650 aa2.95□□□□□ -1.94
UBE2A-203ENST00000371569 GALNT6Q8NCL4 622 aa2.95□□□□□ -1.94
UBE2A-203ENST00000371569 PURBQ96QR8 312 aaKnown RBP2.95□□□□□ -1.94
UBE2A-203ENST00000371569 E9PSI1 815 aa2.94□□□□□ -1.94
UBE2A-203ENST00000371569 PLA2G4EQ3MJ16 856 aa2.94□□□□□ -1.94
UBE2A-203ENST00000371569 RNF19BQ6ZMZ0 732 aa2.94□□□□□ -1.94
UBE2A-203ENST00000371569 DCAF5Q96JK2 942 aa2.94□□□□□ -1.94
UBE2A-203ENST00000371569 TSEN34Q9BSV6 310 aaKnown RBP2.94□□□□□ -1.94
UBE2A-203ENST00000371569 COL25A1Q9BXS0 654 aaPredicted RBP2.94□□□□□ -1.94
UBE2A-203ENST00000371569 SENP3-EIF4A1A0A087X0R7 540 aa2.94□□□□□ -1.94
UBE2A-203ENST00000371569 DDX11L8A8MPP1 907 aa2.94□□□□□ -1.94
UBE2A-203ENST00000371569 CSB-PGBD3P0DP91 1061 aa2.94□□□□□ -1.94
UBE2A-203ENST00000371569 WDR4P57081 412 aaKnown RBP2.94□□□□□ -1.94
UBE2A-203ENST00000371569 GLMNQ92990 594 aa2.94□□□□□ -1.94
UBE2A-203ENST00000371569 GDPD2Q9HCC8 539 aa2.94□□□□□ -1.94
UBE2A-203ENST00000371569 KRT76Q01546 638 aa2.93□□□□□ -1.94
UBE2A-203ENST00000371569 PTPRNQ16849 979 aa2.93□□□□□ -1.94
UBE2A-203ENST00000371569 PRPF38BQ5VTL8 546 aaKnown RBP2.93□□□□□ -1.94
UBE2A-203ENST00000371569 RETREG3Q86VR2 466 aa2.93□□□□□ -1.94
UBE2A-203ENST00000371569 KLF16Q9BXK1 252 aaPredicted RBP2.93□□□□□ -1.94
UBE2A-203ENST00000371569 LILRB3O75022 631 aa2.93□□□□□ -1.94
UBE2A-203ENST00000371569 SRPK2P78362 688 aaKnown RBP2.93□□□□□ -1.94
UBE2A-203ENST00000371569 RSBN1LQ6PCB5 846 aaPredicted RBP2.93□□□□□ -1.94
UBE2A-203ENST00000371569 SPIRE2Q8WWL2 714 aa2.93□□□□□ -1.94
UBE2A-203ENST00000371569 NUDT12Q9BQG2 462 aa2.93□□□□□ -1.94
UBE2A-203ENST00000371569 LIMD1Q9UGP4 676 aa2.93□□□□□ -1.94
UBE2A-203ENST00000371569 PROCP04070 461 aa2.92□□□□□ -1.94
UBE2A-203ENST00000371569 CCNYL3P0C7X3 344 aa2.92□□□□□ -1.94
UBE2A-203ENST00000371569 CD46P15529 392 aa2.92□□□□□ -1.94
UBE2A-203ENST00000371569 BAG6P46379 1132 aa2.92□□□□□ -1.94
UBE2A-203ENST00000371569 SH3BP2P78314 561 aa2.92□□□□□ -1.94
UBE2A-203ENST00000371569 NDUFB9Q9Y6M9 179 aa2.92□□□□□ -1.94
UBE2A-203ENST00000371569 MYO15BQ96JP2 1530 aa2.92□□□□□ -1.94
UBE2A-203ENST00000371569 SMARCA4P51532 1647 aa2.92□□□□□ -1.94
UBE2A-203ENST00000371569 YBX3P16989 372 aaKnown RBP eCLIP2.92□□□□□ -1.943e-7■■□□□ 11.5
UBE2A-203ENST00000371569 SOX11P35716 441 aa2.92□□□□□ -1.94
UBE2A-203ENST00000371569 ABL2P42684 1182 aa2.92□□□□□ -1.94
UBE2A-203ENST00000371569 DESI1Q6ICB0 168 aa2.92□□□□□ -1.94
UBE2A-203ENST00000371569 B4GALNT3Q6L9W6 998 aa2.92□□□□□ -1.94
UBE2A-203ENST00000371569 MEIOBQ8N635 442 aa2.92□□□□□ -1.94
UBE2A-203ENST00000371569 CLASP1Q7Z460 1538 aa2.92□□□□□ -1.94
UBE2A-203ENST00000371569 SLC35F4A4IF30 521 aa2.91□□□□□ -1.94
UBE2A-203ENST00000371569 KDM4AO75164 1064 aa2.91□□□□□ -1.94
UBE2A-203ENST00000371569 RBM25P49756 843 aaKnown RBP2.91□□□□□ -1.94
UBE2A-203ENST00000371569 KCNH2Q12809 1159 aa2.91□□□□□ -1.94
UBE2A-203ENST00000371569 NUTM1Q86Y26 1132 aa2.91□□□□□ -1.94
UBE2A-203ENST00000371569 GPR161Q8N6U8 529 aaKnown RBP2.91□□□□□ -1.94
UBE2A-203ENST00000371569 NESP48681 1621 aa2.91□□□□□ -1.94
UBE2A-203ENST00000371569 CELA2BP08218 269 aaPredicted RBP2.91□□□□□ -1.94
UBE2A-203ENST00000371569 CCDC27Q2M243 656 aa2.91□□□□□ -1.94
UBE2A-203ENST00000371569 CFAP70Q5T0N1 1121 aa2.91□□□□□ -1.94
UBE2A-203ENST00000371569 HDGFL1Q5TGJ6 251 aa2.91□□□□□ -1.94
UBE2A-203ENST00000371569 SND1Q7KZF4 910 aaKnown RBP eCLIP2.91□□□□□ -1.949e-6■■■■□ 21.9
UBE2A-203ENST00000371569 EVA1BQ9NVM1 165 aa2.91□□□□□ -1.94
UBE2A-203ENST00000371569 NSFL1CQ9UNZ2 370 aaKnown RBP2.91□□□□□ -1.94
UBE2A-203ENST00000371569 GNEQ9Y223 722 aaKnown RBP2.91□□□□□ -1.94
UBE2A-203ENST00000371569 MAP4K5Q9Y4K4 846 aa2.91□□□□□ -1.94
UBE2A-203ENST00000371569 PDS5BQ9NTI5 1447 aa2.91□□□□□ -1.94
UBE2A-203ENST00000371569 ABCC10Q5T3U5 1492 aa2.91□□□□□ -1.94
UBE2A-203ENST00000371569 POM121CA8CG34 1229 aa2.9□□□□□ -1.94
UBE2A-203ENST00000371569 ATG7O95352 703 aa2.9□□□□□ -1.94
UBE2A-203ENST00000371569 BCRP11274 1271 aa2.9□□□□□ -1.94
UBE2A-203ENST00000371569 BMP2P12643 396 aa2.9□□□□□ -1.94
UBE2A-203ENST00000371569 FOXD4L5Q5VV16 416 aaPredicted RBP2.9□□□□□ -1.94
UBE2A-203ENST00000371569 FBXO31Q5XUX0 539 aaPredicted RBP2.9□□□□□ -1.94
UBE2A-203ENST00000371569 FOXR1Q6PIV2 292 aa2.9□□□□□ -1.94
UBE2A-203ENST00000371569 FOXD4L4Q8WXT5 416 aaPredicted RBP2.9□□□□□ -1.94
UBE2A-203ENST00000371569 PPP1R12CQ9BZL4 782 aa2.9□□□□□ -1.94
UBE2A-203ENST00000371569 TBC1D2BQ9UPU7 963 aa2.9□□□□□ -1.94
UBE2A-203ENST00000371569 AP1G2O75843 785 aa2.9□□□□□ -1.95
UBE2A-203ENST00000371569 ZIC2O95409 532 aaPredicted RBP2.9□□□□□ -1.95
UBE2A-203ENST00000371569 USP17L8P0C7I0 530 aa2.9□□□□□ -1.95
UBE2A-203ENST00000371569 ERCC3P19447 782 aa2.9□□□□□ -1.95
UBE2A-203ENST00000371569 LINC00528Q8N1L1 170 aa2.9□□□□□ -1.95
UBE2A-203ENST00000371569 CCDC155Q8N6L0 562 aa2.9□□□□□ -1.95
UBE2A-203ENST00000371569 ARMC2Q8NEN0 867 aa2.9□□□□□ -1.95
UBE2A-203ENST00000371569 VRTNQ9H8Y1 702 aa2.9□□□□□ -1.95
UBE2A-203ENST00000371569 EMILIN1Q9Y6C2 1016 aa2.9□□□□□ -1.95
UBE2A-203ENST00000371569 CHD1O14646 1710 aa2.9□□□□□ -1.95
UBE2A-203ENST00000371569 ADAMTS2O95450 1211 aa2.89□□□□□ -1.95
UBE2A-203ENST00000371569 ZNF511Q8NB15 262 aa2.89□□□□□ -1.95
UBE2A-203ENST00000371569 GJD4Q96KN9 370 aaPredicted RBP2.89□□□□□ -1.95
UBE2A-203ENST00000371569 ALG2Q9H553 416 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms