RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 CASC1Q6TDU7 716 aa11.77□□□□□ -0.52
LRRC40-201ENST00000370952 ZNF428Q96B54 188 aa11.77□□□□□ -0.52
LRRC40-201ENST00000370952 ARHGEF28Q8N1W1 1705 aaKnown RBP11.77□□□□□ -0.53
LRRC40-201ENST00000370952 NOLC1Q14978 699 aaKnown RBP eCLIP11.77□□□□□ -0.53
LRRC40-201ENST00000370952 FCHSD2O94868 740 aa11.77□□□□□ -0.53
LRRC40-201ENST00000370952 ATP2B3Q16720 1220 aa11.77□□□□□ -0.53
LRRC40-201ENST00000370952 MINK1Q8N4C8 1332 aaPredicted RBP11.77□□□□□ -0.53
LRRC40-201ENST00000370952 BRD1O95696 1058 aa11.76□□□□□ -0.53
LRRC40-201ENST00000370952 PPP4R3BQ5MIZ7 849 aa11.76□□□□□ -0.53
LRRC40-201ENST00000370952 API5Q9BZZ5 524 aaKnown RBP11.76□□□□□ -0.53
LRRC40-201ENST00000370952 REC8O95072 547 aa11.76□□□□□ -0.53
LRRC40-201ENST00000370952 NFE2L2Q16236 605 aa11.76□□□□□ -0.53
LRRC40-201ENST00000370952 PIBF1Q8WXW3 757 aa11.76□□□□□ -0.53
LRRC40-201ENST00000370952 CFAP44Q96MT7 982 aa11.76□□□□□ -0.53
LRRC40-201ENST00000370952 FAM83GA6ND36 823 aa11.75□□□□□ -0.53
LRRC40-201ENST00000370952 SPDYE4A6NLX3 237 aa11.75□□□□□ -0.53
LRRC40-201ENST00000370952 ERC2O15083 957 aa11.75□□□□□ -0.53
LRRC40-201ENST00000370952 GNAI1P63096 354 aa11.75□□□□□ -0.53
LRRC40-201ENST00000370952 KRT24Q2M2I5 525 aa11.75□□□□□ -0.53
LRRC40-201ENST00000370952 TSHZ3Q63HK5 1081 aa11.75□□□□□ -0.53
LRRC40-201ENST00000370952 PLCB2Q00722 1185 aa11.75□□□□□ -0.53
LRRC40-201ENST00000370952 DCTN1Q14203 1278 aa11.75□□□□□ -0.53
LRRC40-201ENST00000370952 CAMSAP1Q5T5Y3 1602 aa11.75□□□□□ -0.53
LRRC40-201ENST00000370952 FAM135BQ49AJ0 1406 aa11.75□□□□□ -0.53
LRRC40-201ENST00000370952 CHD1O14646 1710 aa11.74□□□□□ -0.53
LRRC40-201ENST00000370952 UTP14CQ5TAP6 766 aaKnown RBP11.74□□□□□ -0.53
LRRC40-201ENST00000370952 GGT6Q6P531 493 aa11.74□□□□□ -0.53
LRRC40-201ENST00000370952 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.74□□□□□ -0.532e-6■□□□□ 9.3
LRRC40-201ENST00000370952 ANKRD44Q8N8A2 993 aa11.74□□□□□ -0.53
LRRC40-201ENST00000370952 PALD1Q9ULE6 856 aa11.74□□□□□ -0.53
LRRC40-201ENST00000370952 ADCY5O95622 1261 aa11.74□□□□□ -0.53
LRRC40-201ENST00000370952 PRIMPOLQ96LW4 560 aa11.74□□□□□ -0.53
LRRC40-201ENST00000370952 IGSF3O75054 1194 aa11.73□□□□□ -0.53
LRRC40-201ENST00000370952 CEP85Q6P2H3 762 aa11.73□□□□□ -0.53
LRRC40-201ENST00000370952 USP48Q86UV5 1035 aa11.73□□□□□ -0.53
LRRC40-201ENST00000370952 SYAP1Q96A49 352 aaPredicted RBP11.73□□□□□ -0.53
LRRC40-201ENST00000370952 PUS7Q96PZ0 661 aaKnown RBP11.73□□□□□ -0.53
LRRC40-201ENST00000370952 IFT57Q9NWB7 429 aa11.73□□□□□ -0.53
LRRC40-201ENST00000370952 TERF2IPQ9NYB0 399 aa11.73□□□□□ -0.53
LRRC40-201ENST00000370952 ATP10DQ9P241 1426 aa11.73□□□□□ -0.53
LRRC40-201ENST00000370952 FANCAO15360 1455 aa11.73□□□□□ -0.53
LRRC40-201ENST00000370952 HCLS1P14317 486 aaPredicted RBP11.73□□□□□ -0.53
LRRC40-201ENST00000370952 BCL2L12Q9HB09 334 aa11.73□□□□□ -0.53
LRRC40-201ENST00000370952 KIF3AQ9Y496 699 aa11.73□□□□□ -0.53
LRRC40-201ENST00000370952 HMGN5P82970 282 aaKnown RBP11.73□□□□□ -0.53
LRRC40-201ENST00000370952 UPF3BQ9BZI7 483 aaKnown RBP11.73□□□□□ -0.53
LRRC40-201ENST00000370952 PNPLA6Q8IY17 1366 aa11.72□□□□□ -0.53
LRRC40-201ENST00000370952 ANKRD26Q9UPS8 1709 aa11.72□□□□□ -0.53
LRRC40-201ENST00000370952 MEIS3Q99687 375 aa11.72□□□□□ -0.53
LRRC40-201ENST00000370952 NPATQ14207 1427 aa11.72□□□□□ -0.53
LRRC40-201ENST00000370952 ZNF853P0CG23 659 aa11.72□□□□□ -0.53
LRRC40-201ENST00000370952 POLKQ9UBT6 870 aa11.72□□□□□ -0.53
LRRC40-201ENST00000370952 MSH6P52701 1360 aa11.71□□□□□ -0.54
LRRC40-201ENST00000370952 ARHGEF40Q8TER5 1519 aa11.71□□□□□ -0.54
LRRC40-201ENST00000370952 DLG5Q8TDM6 1919 aa11.71□□□□□ -0.54
LRRC40-201ENST00000370952 CD163L1Q9NR16 1453 aa11.7□□□□□ -0.54
LRRC40-201ENST00000370952 GTF2F1P35269 517 aaKnown RBP eCLIP11.7□□□□□ -0.54
LRRC40-201ENST00000370952 FKBP5Q13451 457 aaPredicted RBP11.7□□□□□ -0.54
LRRC40-201ENST00000370952 CUL4AQ13619 759 aa11.7□□□□□ -0.54
LRRC40-201ENST00000370952 CABP1Q9NZU7 370 aa11.7□□□□□ -0.54
LRRC40-201ENST00000370952 EMILIN1Q9Y6C2 1016 aa11.7□□□□□ -0.54
LRRC40-201ENST00000370952 MAP2P11137 1827 aaKnown RBP11.7□□□□□ -0.54
LRRC40-201ENST00000370952 PHF14O94880 888 aa11.7□□□□□ -0.54
LRRC40-201ENST00000370952 U2AF2P26368 475 aaKnown RBP eCLIP11.7□□□□□ -0.54
LRRC40-201ENST00000370952 RPAP2Q8IXW5 612 aaPredicted RBP11.7□□□□□ -0.54
LRRC40-201ENST00000370952 ANO2Q9NQ90 1003 aa11.7□□□□□ -0.54
LRRC40-201ENST00000370952 DTNBO60941 627 aa11.69□□□□□ -0.54
LRRC40-201ENST00000370952 PDE1AP54750 535 aa11.69□□□□□ -0.54
LRRC40-201ENST00000370952 HDGFL2Q7Z4V5 671 aaPredicted RBP11.69□□□□□ -0.54
LRRC40-201ENST00000370952 PDCL2Q8N4E4 241 aa11.69□□□□□ -0.54
LRRC40-201ENST00000370952 PRAM1Q96QH2 718 aa11.69□□□□□ -0.54
LRRC40-201ENST00000370952 RTL1A6NKG5 1358 aa11.69□□□□□ -0.54
LRRC40-201ENST00000370952 PYCARDQ9ULZ3 195 aa11.69□□□□□ -0.54
LRRC40-201ENST00000370952 CNPY2Q9Y2B0 182 aa11.69□□□□□ -0.54
LRRC40-201ENST00000370952 RIOK3O14730 519 aaKnown RBP11.69□□□□□ -0.54
LRRC40-201ENST00000370952 SPC24Q8NBT2 197 aa11.69□□□□□ -0.54
LRRC40-201ENST00000370952 VGFO15240 615 aaPredicted RBP11.68□□□□□ -0.54
LRRC40-201ENST00000370952 UVSSAQ2YD98 709 aa11.68□□□□□ -0.54
LRRC40-201ENST00000370952 FAM184AQ8NB25 1140 aa11.68□□□□□ -0.54
LRRC40-201ENST00000370952 ESYT1Q9BSJ8 1104 aa11.68□□□□□ -0.54
LRRC40-201ENST00000370952 EXOC6BQ9Y2D4 811 aa11.68□□□□□ -0.54
LRRC40-201ENST00000370952 RPGRIP1LQ68CZ1 1315 aa11.68□□□□□ -0.54
LRRC40-201ENST00000370952 RILPL2Q969X0 211 aa11.68□□□□□ -0.54
LRRC40-201ENST00000370952 LARP6Q9BRS8 491 aaKnown RBP11.68□□□□□ -0.54
LRRC40-201ENST00000370952 GTPBP4Q9BZE4 634 aaKnown RBP11.68□□□□□ -0.54
LRRC40-201ENST00000370952 SRCIN1Q9C0H9 1055 aa11.68□□□□□ -0.54
LRRC40-201ENST00000370952 SPTLC3Q9NUV7 552 aa11.68□□□□□ -0.54
LRRC40-201ENST00000370952 YEATS2Q9ULM3 1422 aa11.67□□□□□ -0.54
LRRC40-201ENST00000370952 AP5Z1O43299 807 aa11.67□□□□□ -0.54
LRRC40-201ENST00000370952 MCM2P49736 904 aa11.67□□□□□ -0.54
LRRC40-201ENST00000370952 CCDC183Q5T5S1 534 aa11.67□□□□□ -0.54
LRRC40-201ENST00000370952 ABCC3O15438 1527 aa11.67□□□□□ -0.54
LRRC40-201ENST00000370952 KIF20BQ96Q89 1820 aa11.67□□□□□ -0.54
LRRC40-201ENST00000370952 GIMAP6Q6P9H5 292 aa11.67□□□□□ -0.54
LRRC40-201ENST00000370952 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.67□□□□□ -0.54
LRRC40-201ENST00000370952 KCNF1Q9H3M0 494 aa11.67□□□□□ -0.54
LRRC40-201ENST00000370952 RGS12O14924 1447 aa11.67□□□□□ -0.54
LRRC40-201ENST00000370952 ZFYVE9O95405 1425 aa11.67□□□□□ -0.54
LRRC40-201ENST00000370952 RIMS2Q9UQ26 1411 aa11.67□□□□□ -0.54
LRRC40-201ENST00000370952 KIDINS220Q9ULH0 1771 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms