RNA–Protein interactions for RNA: ENST00000370228.1

TWNK-202, Transcript of twinkle mtDNA helicase, humanhuman

TSL 1 (best) BASIC

Gene TWNK, Length 3,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-202ENST00000370228 PTMSP20962 102 aa13.51□□□□□ -0.25
TWNK-202ENST00000370228 HSPA1LP34931 641 aa13.51□□□□□ -0.25
TWNK-202ENST00000370228 FAM43BQ6ZT52 329 aaPredicted RBP13.51□□□□□ -0.25
TWNK-202ENST00000370228 GZF1Q9H116 711 aaPredicted RBP13.51□□□□□ -0.25
TWNK-202ENST00000370228 NLRP13Q86W25 1043 aa13.51□□□□□ -0.25
TWNK-202ENST00000370228 LTV1Q96GA3 475 aaPredicted RBP13.51□□□□□ -0.25
TWNK-202ENST00000370228 ISY1Q9ULR0 285 aaKnown RBP13.51□□□□□ -0.25
TWNK-202ENST00000370228 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.51□□□□□ -0.25
TWNK-202ENST00000370228 PDE3BQ13370 1112 aa13.51□□□□□ -0.25
TWNK-202ENST00000370228 CHRNA2Q15822 529 aa13.51□□□□□ -0.25
TWNK-202ENST00000370228 XIRP1Q702N8 1843 aaKnown RBP13.5□□□□□ -0.25
TWNK-202ENST00000370228 MORC1Q86VD1 984 aa13.5□□□□□ -0.25
TWNK-202ENST00000370228 NWD1Q149M9 1564 aa13.49□□□□□ -0.25
TWNK-202ENST00000370228 TTC21BQ7Z4L5 1316 aa13.49□□□□□ -0.25
TWNK-202ENST00000370228 KCNJ4P48050 445 aa13.49□□□□□ -0.25
TWNK-202ENST00000370228 CCDC9Q9Y3X0 531 aaKnown RBP13.49□□□□□ -0.25
TWNK-202ENST00000370228 PLEKHG3A1L390 1219 aa13.48□□□□□ -0.25
TWNK-202ENST00000370228 PLIN1O60240 522 aa13.48□□□□□ -0.25
TWNK-202ENST00000370228 EMILIN1Q9Y6C2 1016 aa13.48□□□□□ -0.25
TWNK-202ENST00000370228 CD163L1Q9NR16 1453 aa13.48□□□□□ -0.25
TWNK-202ENST00000370228 GOLGB1Q14789 3259 aaKnown RBP13.47□□□□□ -0.25
TWNK-202ENST00000370228 ZBTB9Q96C00 473 aa13.47□□□□□ -0.25
TWNK-202ENST00000370228 CGNL1Q0VF96 1302 aa13.47□□□□□ -0.25
TWNK-202ENST00000370228 NPHP3Q7Z494 1330 aa13.47□□□□□ -0.25
TWNK-202ENST00000370228 USP32Q8NFA0 1604 aa13.47□□□□□ -0.25
TWNK-202ENST00000370228 ANKRD36BQ8N2N9 1353 aa13.47□□□□□ -0.25
TWNK-202ENST00000370228 KNDC1Q76NI1 1749 aa13.47□□□□□ -0.25
TWNK-202ENST00000370228 PRR29P0C7W0 189 aa13.46□□□□□ -0.25
TWNK-202ENST00000370228 MSNP26038 577 aaKnown RBP13.46□□□□□ -0.25
TWNK-202ENST00000370228 COG3Q96JB2 828 aa13.46□□□□□ -0.25
TWNK-202ENST00000370228 CARD10Q9BWT7 1032 aa13.46□□□□□ -0.25
TWNK-202ENST00000370228 CDCA7LQ96GN5 454 aa13.46□□□□□ -0.26
TWNK-202ENST00000370228 SKAP1Q86WV1 359 aa13.45□□□□□ -0.26
TWNK-202ENST00000370228 PHF14O94880 888 aa13.44□□□□□ -0.26
TWNK-202ENST00000370228 ZNF692Q9BU19 519 aaPredicted RBP13.44□□□□□ -0.26
TWNK-202ENST00000370228 ATP2B3Q16720 1220 aa13.44□□□□□ -0.26
TWNK-202ENST00000370228 ANTXR1Q9H6X2 564 aa13.44□□□□□ -0.26
TWNK-202ENST00000370228 USP6P35125 1406 aa13.44□□□□□ -0.26
TWNK-202ENST00000370228 MCCP23508 829 aa13.44□□□□□ -0.26
TWNK-202ENST00000370228 CRBNQ96SW2 442 aa13.44□□□□□ -0.26
TWNK-202ENST00000370228 C8orf34Q49A92 452 aa13.43□□□□□ -0.26
TWNK-202ENST00000370228 CDC42BPGQ6DT37 1551 aa13.43□□□□□ -0.26
TWNK-202ENST00000370228 MTHFSP49914 203 aa13.42□□□□□ -0.26
TWNK-202ENST00000370228 FAM161AQ3B820 660 aa13.42□□□□□ -0.26
TWNK-202ENST00000370228 SLKQ9H2G2 1235 aaPredicted RBP13.42□□□□□ -0.26
TWNK-202ENST00000370228 TRIM6-TRIM34B2RNG4 842 aa13.42□□□□□ -0.26
TWNK-202ENST00000370228 MCM4P33991 863 aa13.42□□□□□ -0.26
TWNK-202ENST00000370228 CCDC173Q0VFZ6 552 aa13.42□□□□□ -0.26
TWNK-202ENST00000370228 BECN1Q14457 450 aa13.42□□□□□ -0.26
TWNK-202ENST00000370228 SASS6Q6UVJ0 657 aa13.42□□□□□ -0.26
TWNK-202ENST00000370228 PPP1R9BQ96SB3 815 aa13.42□□□□□ -0.26
TWNK-202ENST00000370228 TRIM34Q9BYJ4 488 aa13.42□□□□□ -0.26
TWNK-202ENST00000370228 MYOM1P52179 1685 aa13.41□□□□□ -0.26
TWNK-202ENST00000370228 TRAK2O60296 914 aa13.41□□□□□ -0.26
TWNK-202ENST00000370228 STRN4Q9NRL3 753 aa13.41□□□□□ -0.26
TWNK-202ENST00000370228 CPSF1Q10570 1443 aaKnown RBP13.41□□□□□ -0.26
TWNK-202ENST00000370228 ZNF500O60304 480 aaPredicted RBP13.41□□□□□ -0.26
TWNK-202ENST00000370228 GCP02774 474 aa13.41□□□□□ -0.26
TWNK-202ENST00000370228 HSP90AB2PQ58FF8 381 aa13.41□□□□□ -0.26
TWNK-202ENST00000370228 FMN2Q9NZ56 1722 aa13.41□□□□□ -0.26
TWNK-202ENST00000370228 ZNF771Q7L3S4 317 aaPredicted RBP13.4□□□□□ -0.26
TWNK-202ENST00000370228 EGFL6Q8IUX8 553 aa13.4□□□□□ -0.26
TWNK-202ENST00000370228 ROBO1Q9Y6N7 1651 aa13.4□□□□□ -0.26
TWNK-202ENST00000370228 TULP2O00295 520 aa13.4□□□□□ -0.26
TWNK-202ENST00000370228 USHBP1Q8N6Y0 703 aa13.4□□□□□ -0.26
TWNK-202ENST00000370228 C8orf37Q96NL8 207 aa13.4□□□□□ -0.26
TWNK-202ENST00000370228 U2SURPO15042 1029 aaKnown RBP13.4□□□□□ -0.26
TWNK-202ENST00000370228 IGSF3O75054 1194 aa13.4□□□□□ -0.26
TWNK-202ENST00000370228 CAPN2P17655 700 aa13.4□□□□□ -0.26
TWNK-202ENST00000370228 AMPHP49418 695 aa13.4□□□□□ -0.26
TWNK-202ENST00000370228 PLCD4Q9BRC7 762 aa13.4□□□□□ -0.26
TWNK-202ENST00000370228 LRRC59Q96AG4 307 aaKnown RBP13.39□□□□□ -0.27
TWNK-202ENST00000370228 ANKARQ7Z5J8 1434 aa13.39□□□□□ -0.27
TWNK-202ENST00000370228 POLR3AO14802 1390 aaPredicted RBP13.39□□□□□ -0.27
TWNK-202ENST00000370228 SPATA31A3Q5VYP0 1347 aa13.39□□□□□ -0.27
TWNK-202ENST00000370228 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.39□□□□□ -0.27
TWNK-202ENST00000370228 LOC102724159A0A0B4J2E5 919 aa13.39□□□□□ -0.27
TWNK-202ENST00000370228 PWP2Q15269 919 aaKnown RBP13.39□□□□□ -0.27
TWNK-202ENST00000370228 PPP2R1AP30153 589 aa13.38□□□□□ -0.27
TWNK-202ENST00000370228 PRDM11Q9NQV5 511 aa13.38□□□□□ -0.27
TWNK-202ENST00000370228 ADGRB2O60241 1585 aa13.38□□□□□ -0.27
TWNK-202ENST00000370228 WDR43Q15061 677 aaKnown RBP eCLIP13.38□□□□□ -0.27
TWNK-202ENST00000370228 EP400NLQ6ZTU2 488 aa13.38□□□□□ -0.27
TWNK-202ENST00000370228 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.38□□□□□ -0.27
TWNK-202ENST00000370228 AXIN2Q9Y2T1 843 aa13.38□□□□□ -0.27
TWNK-202ENST00000370228 DCCP43146 1447 aa13.38□□□□□ -0.27
TWNK-202ENST00000370228 ZNF710Q8N1W2 664 aa13.38□□□□□ -0.27
TWNK-202ENST00000370228 SOS2Q07890 1332 aaPredicted RBP13.37□□□□□ -0.27
TWNK-202ENST00000370228 EDC4Q6P2E9 1401 aaKnown RBP13.37□□□□□ -0.27
TWNK-202ENST00000370228 HMOX1P09601 288 aa13.37□□□□□ -0.27
TWNK-202ENST00000370228 TIGD1Q96MW7 591 aa13.37□□□□□ -0.27
TWNK-202ENST00000370228 MAP3K19Q56UN5 1328 aa13.37□□□□□ -0.27
TWNK-202ENST00000370228 UTRNP46939 3433 aa13.37□□□□□ -0.27
TWNK-202ENST00000370228 CSPP1Q1MSJ5 1256 aa13.36□□□□□ -0.27
TWNK-202ENST00000370228 POLKQ9UBT6 870 aa13.36□□□□□ -0.27
TWNK-202ENST00000370228 CCDC146Q8IYE0 955 aa13.36□□□□□ -0.27
TWNK-202ENST00000370228 NCOA3Q9Y6Q9 1424 aa13.36□□□□□ -0.27
TWNK-202ENST00000370228 PUS7Q96PZ0 661 aaKnown RBP13.36□□□□□ -0.27
TWNK-202ENST00000370228 CSB-PGBD3P0DP91 1061 aa13.35□□□□□ -0.27
TWNK-202ENST00000370228 MEX3CQ5U5Q3 659 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 314.8 ms