RNA–Protein interactions for RNA: ENST00000370203.8

TMEM56-201, Transcript of transmembrane protein 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM56, Length 6,822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-201ENST00000370203 BOLA2Q9H3K6 86 aa14.83□□□□□ -0.04
TMEM56-201ENST00000370203 RRBP1Q9P2E9 1410 aaKnown RBP14.83□□□□□ -0.04
TMEM56-201ENST00000370203 CCDC144CPQ8IYA2 1237 aa14.83□□□□□ -0.04
TMEM56-201ENST00000370203 AIDAQ96BJ3 306 aa14.83□□□□□ -0.04
TMEM56-201ENST00000370203 HIP1O00291 1037 aa14.82□□□□□ -0.04
TMEM56-201ENST00000370203 CASTP20810 708 aaKnown RBP14.82□□□□□ -0.04
TMEM56-201ENST00000370203 CRACR2BQ8N4Y2 399 aaPredicted RBP14.82□□□□□ -0.04
TMEM56-201ENST00000370203 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.82□□□□□ -0.04
TMEM56-201ENST00000370203 FERMT3Q86UX7 667 aa14.82□□□□□ -0.04
TMEM56-201ENST00000370203 TTC16Q8NEE8 873 aa14.82□□□□□ -0.04
TMEM56-201ENST00000370203 CCDC97Q96F63 343 aaPredicted RBP14.82□□□□□ -0.04
TMEM56-201ENST00000370203 UBA5Q9GZZ9 404 aa14.82□□□□□ -0.04
TMEM56-201ENST00000370203 TMOD3Q9NYL9 352 aa14.82□□□□□ -0.04
TMEM56-201ENST00000370203 CCT4P50991 539 aaKnown RBP14.82□□□□□ -0.04
TMEM56-201ENST00000370203 CEP126Q9P2H0 1117 aa14.82□□□□□ -0.04
TMEM56-201ENST00000370203 DNA2P51530 1060 aa14.82□□□□□ -0.04
TMEM56-201ENST00000370203 CCDC8Q9H0W5 538 aaPredicted RBP14.81□□□□□ -0.04
TMEM56-201ENST00000370203 CDR1P51861 262 aa14.81□□□□□ -0.04
TMEM56-201ENST00000370203 NUDT16Q96DE0 195 aaKnown RBP14.81□□□□□ -0.04
TMEM56-201ENST00000370203 H0YHG0 523 aa14.8□□□□□ -0.04
TMEM56-201ENST00000370203 CHD1LQ86WJ1 897 aa14.8□□□□□ -0.04
TMEM56-201ENST00000370203 NESP48681 1621 aa14.8□□□□□ -0.04
TMEM56-201ENST00000370203 PPFIBP1Q86W92 1011 aa14.8□□□□□ -0.04
TMEM56-201ENST00000370203 FOXO3O43524 673 aa14.8□□□□□ -0.04
TMEM56-201ENST00000370203 CCDC181Q5TID7 509 aa14.8□□□□□ -0.04
TMEM56-201ENST00000370203 TAF3Q5VWG9 929 aa14.8□□□□□ -0.04
TMEM56-201ENST00000370203 GNAT3A8MTJ3 354 aa14.8□□□□□ -0.04
TMEM56-201ENST00000370203 NEBLO76041 1014 aa14.8□□□□□ -0.04
TMEM56-201ENST00000370203 TMEM57Q8N5G2 664 aa14.8□□□□□ -0.04
TMEM56-201ENST00000370203 LRRC9Q6ZRR7 1453 aa14.8□□□□□ -0.04
TMEM56-201ENST00000370203 NME9Q86XW9 330 aa14.79□□□□□ -0.04
TMEM56-201ENST00000370203 GCC1Q96CN9 775 aa14.79□□□□□ -0.04
TMEM56-201ENST00000370203 SPATA32Q96LK8 384 aa14.79□□□□□ -0.04
TMEM56-201ENST00000370203 FBLN1P23142 703 aa14.79□□□□□ -0.04
TMEM56-201ENST00000370203 BLOC1S2Q6QNY1 142 aa14.79□□□□□ -0.04
TMEM56-201ENST00000370203 ZNHIT6Q9NWK9 470 aaKnown RBP14.79□□□□□ -0.04
TMEM56-201ENST00000370203 TNNT1P13805 278 aa14.78□□□□□ -0.04
TMEM56-201ENST00000370203 CCDC83Q8IWF9 413 aa14.78□□□□□ -0.04
TMEM56-201ENST00000370203 CCDC96Q2M329 555 aa14.78□□□□□ -0.04
TMEM56-201ENST00000370203 NGLY1Q96IV0 654 aa14.78□□□□□ -0.04
TMEM56-201ENST00000370203 TSPYL1Q9H0U9 437 aa14.78□□□□□ -0.04
TMEM56-201ENST00000370203 ZBTB3Q9H5J0 574 aa14.78□□□□□ -0.04
TMEM56-201ENST00000370203 KLHL10Q6JEL2 608 aa14.78□□□□□ -0.04
TMEM56-201ENST00000370203 CUX1P39880 1505 aa14.78□□□□□ -0.04
TMEM56-201ENST00000370203 PRPF40BQ6NWY9 871 aaKnown RBP14.78□□□□□ -0.04
TMEM56-201ENST00000370203 ACBD3Q9H3P7 528 aa14.78□□□□□ -0.04
TMEM56-201ENST00000370203 MKNK2Q9HBH9 465 aa14.78□□□□□ -0.04
TMEM56-201ENST00000370203 RANBP6O60518 1105 aaKnown RBP14.78□□□□□ -0.04
TMEM56-201ENST00000370203 SEPT7Q16181 437 aaKnown RBP14.78□□□□□ -0.04
TMEM56-201ENST00000370203 DUSP27Q5VZP5 1158 aa14.78□□□□□ -0.04
TMEM56-201ENST00000370203 ATF7IPQ6VMQ6 1270 aa14.78□□□□□ -0.04
TMEM56-201ENST00000370203 VAT1LQ9HCJ6 419 aa14.78□□□□□ -0.04
TMEM56-201ENST00000370203 BRD4O60885 1362 aaPredicted RBP14.78□□□□□ -0.04
TMEM56-201ENST00000370203 STARD3NLO95772 234 aa14.77□□□□□ -0.04
TMEM56-201ENST00000370203 RABEP1Q15276 862 aa14.77□□□□□ -0.04
TMEM56-201ENST00000370203 SPDYE4A6NLX3 237 aa14.77□□□□□ -0.05
TMEM56-201ENST00000370203 TSHZ3Q63HK5 1081 aa14.77□□□□□ -0.05
TMEM56-201ENST00000370203 ACSBG1Q96GR2 724 aa14.77□□□□□ -0.05
TMEM56-201ENST00000370203 PSMD1Q99460 953 aa14.77□□□□□ -0.05
TMEM56-201ENST00000370203 MVPQ14764 893 aaKnown RBP14.76□□□□□ -0.05
TMEM56-201ENST00000370203 DZIP1Q86YF9 867 aaKnown RBP14.76□□□□□ -0.05
TMEM56-201ENST00000370203 KIF21BO75037 1637 aa14.76□□□□□ -0.05
TMEM56-201ENST00000370203 FILIP1Q7Z7B0 1213 aa14.76□□□□□ -0.05
TMEM56-201ENST00000370203 ZNF692Q9BU19 519 aaPredicted RBP14.76□□□□□ -0.05
TMEM56-201ENST00000370203 LRRFIP2Q9Y608 721 aaKnown RBP14.76□□□□□ -0.05
TMEM56-201ENST00000370203 CHRNA2Q15822 529 aa14.76□□□□□ -0.05
TMEM56-201ENST00000370203 NOL7Q9UMY1 257 aaKnown RBP14.76□□□□□ -0.05
TMEM56-201ENST00000370203 ATP5J2-PTCD1G3V325 749 aa14.76□□□□□ -0.05
TMEM56-201ENST00000370203 WDR70Q9NW82 654 aa14.76□□□□□ -0.05
TMEM56-201ENST00000370203 TRMT112Q9UI30 125 aaKnown RBP14.76□□□□□ -0.05
TMEM56-201ENST00000370203 FBXO31Q5XUX0 539 aaPredicted RBP14.76□□□□□ -0.05
TMEM56-201ENST00000370203 ZSCAN25Q6NSZ9 544 aa14.76□□□□□ -0.05
TMEM56-201ENST00000370203 K7ELQ4 463 aaPredicted RBP14.75□□□□□ -0.05
TMEM56-201ENST00000370203 PIP4K2AP48426 406 aaPredicted RBP14.75□□□□□ -0.05
TMEM56-201ENST00000370203 STIM1Q13586 685 aa14.75□□□□□ -0.05
TMEM56-201ENST00000370203 NSD3Q9BZ95 1437 aa14.75□□□□□ -0.05
TMEM56-201ENST00000370203 RDXP35241 583 aaKnown RBP14.75□□□□□ -0.05
TMEM56-201ENST00000370203 TMOD2Q9NZR1 351 aa14.75□□□□□ -0.05
TMEM56-201ENST00000370203 C9orf84Q5VXU9 1444 aa14.75□□□□□ -0.05
TMEM56-201ENST00000370203 PLCD3Q8N3E9 789 aa14.75□□□□□ -0.05
TMEM56-201ENST00000370203 ZNF622Q969S3 477 aaKnown RBP eCLIP14.75□□□□□ -0.05
TMEM56-201ENST00000370203 UPF3BQ9BZI7 483 aaKnown RBP14.75□□□□□ -0.05
TMEM56-201ENST00000370203 EMILIN1Q9Y6C2 1016 aa14.75□□□□□ -0.05
TMEM56-201ENST00000370203 CA8P35219 290 aa14.75□□□□□ -0.05
TMEM56-201ENST00000370203 CEP57L1Q8IYX8 460 aa14.75□□□□□ -0.05
TMEM56-201ENST00000370203 CT47B1P0C2W7 299 aaPredicted RBP14.75□□□□□ -0.05
TMEM56-201ENST00000370203 SNRKQ9NRH2 765 aa14.75□□□□□ -0.05
TMEM56-201ENST00000370203 CCT2P78371 535 aaKnown RBP14.74□□□□□ -0.05
TMEM56-201ENST00000370203 RPGRQ92834 1020 aaKnown RBP14.74□□□□□ -0.05
TMEM56-201ENST00000370203 C6orf229H3BNL8 230 aa14.74□□□□□ -0.05
TMEM56-201ENST00000370203 PDCP20941 246 aa14.74□□□□□ -0.05
TMEM56-201ENST00000370203 MRE11P49959 708 aa14.74□□□□□ -0.05
TMEM56-201ENST00000370203 IMMTQ16891 758 aaKnown RBP14.74□□□□□ -0.05
TMEM56-201ENST00000370203 PNISRQ8TF01 805 aaKnown RBP14.74□□□□□ -0.05
TMEM56-201ENST00000370203 FANCIQ9NVI1 1328 aa14.74□□□□□ -0.05
TMEM56-201ENST00000370203 SYNJ2O15056 1496 aa14.74□□□□□ -0.05
TMEM56-201ENST00000370203 F8W031 263 aaPredicted RBP14.74□□□□□ -0.05
TMEM56-201ENST00000370203 CAVIN4Q5BKX8 364 aa14.74□□□□□ -0.05
TMEM56-201ENST00000370203 TAF7Q15545 349 aaPredicted RBP14.73□□□□□ -0.05
TMEM56-201ENST00000370203 ISM2Q6H9L7 571 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms