RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 TNS2Q63HR2 1409 aa20.74■□□□□ 0.91
PRPF38B-202ENST00000370022 PDE3BQ13370 1112 aa20.73■□□□□ 0.91
PRPF38B-202ENST00000370022 AEBP1Q8IUX7 1158 aa20.73■□□□□ 0.91
PRPF38B-202ENST00000370022 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.73■□□□□ 0.912e-6■■■□□ 15.4
PRPF38B-202ENST00000370022 HMOX1P09601 288 aa20.72■□□□□ 0.91
PRPF38B-202ENST00000370022 FCHSD2O94868 740 aa20.72■□□□□ 0.91
PRPF38B-202ENST00000370022 WDR43Q15061 677 aaKnown RBP eCLIP20.72■□□□□ 0.91
PRPF38B-202ENST00000370022 KRT27Q7Z3Y8 459 aa20.72■□□□□ 0.91
PRPF38B-202ENST00000370022 ZCRB1Q8TBF4 217 aaKnown RBP20.72■□□□□ 0.91
PRPF38B-202ENST00000370022 AMOTQ4VCS5 1084 aa20.71■□□□□ 0.91
PRPF38B-202ENST00000370022 PNNQ9H307 717 aaKnown RBP20.71■□□□□ 0.91
PRPF38B-202ENST00000370022 MRS2Q9HD23 443 aa20.71■□□□□ 0.91
PRPF38B-202ENST00000370022 SPG7Q9UQ90 795 aa20.71■□□□□ 0.91
PRPF38B-202ENST00000370022 PLEKHO1Q53GL0 409 aaPredicted RBP20.69■□□□□ 0.9
PRPF38B-202ENST00000370022 RSPH6AQ9H0K4 717 aa20.69■□□□□ 0.9
PRPF38B-202ENST00000370022 CCER2I3L3R5 266 aa20.68■□□□□ 0.9
PRPF38B-202ENST00000370022 PCDH11XQ9BZA7 1347 aa20.68■□□□□ 0.9
PRPF38B-202ENST00000370022 PCDH11YQ9BZA8 1340 aa20.68■□□□□ 0.9
PRPF38B-202ENST00000370022 PKD1L3Q7Z443 1732 aa20.68■□□□□ 0.9
PRPF38B-202ENST00000370022 CCDC184Q52MB2 194 aa20.68■□□□□ 0.9
PRPF38B-202ENST00000370022 BRWD3Q6RI45 1802 aa20.67■□□□□ 0.9
PRPF38B-202ENST00000370022 PRKAR2BP31323 418 aa20.67■□□□□ 0.9
PRPF38B-202ENST00000370022 NEFMP07197 916 aa20.66■□□□□ 0.9
PRPF38B-202ENST00000370022 MARCH10Q8NA82 808 aaPredicted RBP20.65■□□□□ 0.9
PRPF38B-202ENST00000370022 BCL9O00512 1426 aa20.64■□□□□ 0.9
PRPF38B-202ENST00000370022 DDX54Q8TDD1 881 aaKnown RBP20.64■□□□□ 0.9
PRPF38B-202ENST00000370022 PNISRQ8TF01 805 aaKnown RBP20.64■□□□□ 0.9
PRPF38B-202ENST00000370022 FAM196AQ6ZSG2 479 aa20.63■□□□□ 0.89
PRPF38B-202ENST00000370022 SHANK3Q9BYB0 1731 aa20.63■□□□□ 0.89
PRPF38B-202ENST00000370022 IFNL2Q8IZJ0 200 aa20.63■□□□□ 0.89
PRPF38B-202ENST00000370022 MIER1Q8N108 512 aa20.63■□□□□ 0.89
PRPF38B-202ENST00000370022 ADAMTS8Q9UP79 889 aa20.63■□□□□ 0.89
PRPF38B-202ENST00000370022 GAS2L2Q8NHY3 880 aa20.62■□□□□ 0.89
PRPF38B-202ENST00000370022 PLEKHF1Q96S99 279 aa20.62■□□□□ 0.89
PRPF38B-202ENST00000370022 CYP27B1O15528 508 aa20.61■□□□□ 0.89
PRPF38B-202ENST00000370022 MAPK8IP3Q9UPT6 1336 aa20.6■□□□□ 0.89
PRPF38B-202ENST00000370022 HSP90AB1P08238 724 aaKnown RBP20.6■□□□□ 0.89
PRPF38B-202ENST00000370022 PHKG2P15735 406 aa20.6■□□□□ 0.89
PRPF38B-202ENST00000370022 MTHFSDQ2M296 383 aaKnown RBP20.6■□□□□ 0.89
PRPF38B-202ENST00000370022 C1orf141Q5JVX7 400 aa20.6■□□□□ 0.89
PRPF38B-202ENST00000370022 ZNF530Q6P9A1 599 aaPredicted RBP20.6■□□□□ 0.89
PRPF38B-202ENST00000370022 NKX1-1Q15270 411 aaPredicted RBP20.59■□□□□ 0.89
PRPF38B-202ENST00000370022 PHACTR3Q96KR7 559 aa20.59■□□□□ 0.89
PRPF38B-202ENST00000370022 AKAP4Q5JQC9 854 aa20.59■□□□□ 0.89
PRPF38B-202ENST00000370022 FAM182BQ5T319 152 aa20.58■□□□□ 0.88
PRPF38B-202ENST00000370022 RUNDC1Q96C34 613 aa20.58■□□□□ 0.88
PRPF38B-202ENST00000370022 DCAF5Q96JK2 942 aa20.55■□□□□ 0.88
PRPF38B-202ENST00000370022 MAP3K5Q99683 1374 aa20.54■□□□□ 0.88
PRPF38B-202ENST00000370022 GNAT3A8MTJ3 354 aa20.54■□□□□ 0.88
PRPF38B-202ENST00000370022 NFE2L2Q16236 605 aa20.53■□□□□ 0.88
PRPF38B-202ENST00000370022 CCDC146Q8IYE0 955 aa20.53■□□□□ 0.88
PRPF38B-202ENST00000370022 FAM9BQ8IZU0 186 aa20.53■□□□□ 0.88
PRPF38B-202ENST00000370022 HTATSF1O43719 755 aaKnown RBP20.52■□□□□ 0.88
PRPF38B-202ENST00000370022 CCDC125Q86Z20 511 aa20.52■□□□□ 0.88
PRPF38B-202ENST00000370022 ERVV-2B6SEH9 535 aa20.51■□□□□ 0.87
PRPF38B-202ENST00000370022 BCL11BQ9C0K0 894 aaPredicted RBP20.51■□□□□ 0.87
PRPF38B-202ENST00000370022 KDM6AO15550 1401 aaPredicted RBP20.5■□□□□ 0.87
PRPF38B-202ENST00000370022 MPRIPQ6WCQ1 1025 aa20.5■□□□□ 0.87
PRPF38B-202ENST00000370022 RTF1Q92541 710 aaKnown RBP20.5■□□□□ 0.87
PRPF38B-202ENST00000370022 NHSQ6T4R5 1651 aa20.5■□□□□ 0.87
PRPF38B-202ENST00000370022 TMPOP42166 694 aaKnown RBP20.49■□□□□ 0.87
PRPF38B-202ENST00000370022 UPF1Q92900 1129 aaKnown RBP eCLIP20.49■□□□□ 0.87
PRPF38B-202ENST00000370022 ACSBG1Q96GR2 724 aa20.49■□□□□ 0.87
PRPF38B-202ENST00000370022 DOT1LQ8TEK3 1739 aa20.49■□□□□ 0.87
PRPF38B-202ENST00000370022 SBF2Q86WG5 1849 aa20.48■□□□□ 0.87
PRPF38B-202ENST00000370022 ADAMTS7Q9UKP4 1686 aa20.48■□□□□ 0.87
PRPF38B-202ENST00000370022 TRIM37O94972 964 aa20.48■□□□□ 0.87
PRPF38B-202ENST00000370022 PRIM1P49642 420 aaKnown RBP20.48■□□□□ 0.87
PRPF38B-202ENST00000370022 LMOD3Q0VAK6 560 aa20.48■□□□□ 0.87
PRPF38B-202ENST00000370022 RNMTO43148 476 aaKnown RBP20.47■□□□□ 0.87
PRPF38B-202ENST00000370022 RIPK4P57078 832 aa20.47■□□□□ 0.87
PRPF38B-202ENST00000370022 SF3B2Q13435 895 aaKnown RBP20.47■□□□□ 0.87
PRPF38B-202ENST00000370022 SYTL4Q96C24 671 aaPredicted RBP20.46■□□□□ 0.87
PRPF38B-202ENST00000370022 TOGARAM1Q9Y4F4 1720 aa20.46■□□□□ 0.87
PRPF38B-202ENST00000370022 APAF1O14727 1248 aa20.46■□□□□ 0.87
PRPF38B-202ENST00000370022 KCNQ2O43526 872 aa20.46■□□□□ 0.87
PRPF38B-202ENST00000370022 TMOD3Q9NYL9 352 aa20.46■□□□□ 0.87
PRPF38B-202ENST00000370022 CEMIPQ8WUJ3 1361 aa20.46■□□□□ 0.87
PRPF38B-202ENST00000370022 SCN11AQ9UI33 1791 aa20.45■□□□□ 0.86
PRPF38B-202ENST00000370022 CABP4P57796 275 aa20.45■□□□□ 0.86
PRPF38B-202ENST00000370022 NCBP3Q53F19 620 aaKnown RBP20.45■□□□□ 0.86
PRPF38B-202ENST00000370022 IL17REQ8NFR9 667 aa20.45■□□□□ 0.86
PRPF38B-202ENST00000370022 LGR6Q9HBX8 967 aa20.45■□□□□ 0.86
PRPF38B-202ENST00000370022 MRC1P22897 1456 aa20.45■□□□□ 0.86
PRPF38B-202ENST00000370022 SLC52A2Q9HAB3 445 aa20.44■□□□□ 0.86
PRPF38B-202ENST00000370022 EP400Q96L91 3159 aa20.44■□□□□ 0.86
PRPF38B-202ENST00000370022 TEFQ10587 303 aa20.42■□□□□ 0.86
PRPF38B-202ENST00000370022 NEUROD2Q15784 382 aa20.42■□□□□ 0.86
PRPF38B-202ENST00000370022 NGEFQ8N5V2 710 aa20.42■□□□□ 0.86
PRPF38B-202ENST00000370022 RRP7AQ9Y3A4 280 aaKnown RBP20.42■□□□□ 0.86
PRPF38B-202ENST00000370022 TNS1Q9HBL0 1735 aaKnown RBP20.42■□□□□ 0.86
PRPF38B-202ENST00000370022 DLG5Q8TDM6 1919 aa20.42■□□□□ 0.86
PRPF38B-202ENST00000370022 MCM10Q7L590 875 aa20.42■□□□□ 0.86
PRPF38B-202ENST00000370022 NFATC2IPQ8NCF5 419 aa20.42■□□□□ 0.86
PRPF38B-202ENST00000370022 PIGBQ92521 554 aa20.42■□□□□ 0.86
PRPF38B-202ENST00000370022 APBA3O96018 575 aa20.41■□□□□ 0.86
PRPF38B-202ENST00000370022 PTF1AQ7RTS3 328 aa20.41■□□□□ 0.86
PRPF38B-202ENST00000370022 ITGB4P16144 1822 aa20.41■□□□□ 0.86
PRPF38B-202ENST00000370022 PLSCR1O15162 318 aa20.4■□□□□ 0.86
PRPF38B-202ENST00000370022 BAG6P46379 1132 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms