RNA–Protein interactions for RNA: ENST00000369729.7

SFR1-202, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFR1, Length 1,503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-202ENST00000369729 LMOD3Q0VAK6 560 aa11.62□□□□□ -0.55
SFR1-202ENST00000369729 MEX3CQ5U5Q3 659 aaKnown RBP11.62□□□□□ -0.55
SFR1-202ENST00000369729 CCDC146Q8IYE0 955 aa11.62□□□□□ -0.55
SFR1-202ENST00000369729 FBXO41Q8TF61 875 aa11.62□□□□□ -0.55
SFR1-202ENST00000369729 AXIN2Q9Y2T1 843 aa11.62□□□□□ -0.55
SFR1-202ENST00000369729 ZBED9Q6R2W3 1325 aa11.62□□□□□ -0.55
SFR1-202ENST00000369729 WDR17Q8IZU2 1322 aa11.62□□□□□ -0.55
SFR1-202ENST00000369729 APAF1O14727 1248 aa11.61□□□□□ -0.55
SFR1-202ENST00000369729 TOM1L2Q6ZVM7 507 aa11.61□□□□□ -0.55
SFR1-202ENST00000369729 BTG4Q9NY30 223 aa11.61□□□□□ -0.55
SFR1-202ENST00000369729 COL14A1Q05707 1796 aaKnown RBP11.61□□□□□ -0.55
SFR1-202ENST00000369729 KDRP35968 1356 aa11.61□□□□□ -0.55
SFR1-202ENST00000369729 PLEKHG2Q9H7P9 1386 aa11.61□□□□□ -0.55
SFR1-202ENST00000369729 TCP11L2Q8N4U5 519 aa11.6□□□□□ -0.55
SFR1-202ENST00000369729 RAPGEF4Q8WZA2 1011 aa11.6□□□□□ -0.55
SFR1-202ENST00000369729 FAM208AQ9UK61 1670 aaKnown RBP11.6□□□□□ -0.55
SFR1-202ENST00000369729 CALD1Q05682 793 aaKnown RBP11.6□□□□□ -0.55
SFR1-202ENST00000369729 PDE3BQ13370 1112 aa11.6□□□□□ -0.55
SFR1-202ENST00000369729 AMOTQ4VCS5 1084 aa11.6□□□□□ -0.55
SFR1-202ENST00000369729 NBPF6Q5VWK0 638 aa11.6□□□□□ -0.55
SFR1-202ENST00000369729 GAS2L2Q8NHY3 880 aa11.6□□□□□ -0.55
SFR1-202ENST00000369729 NGLY1Q96IV0 654 aa11.6□□□□□ -0.55
SFR1-202ENST00000369729 NBPF4Q96M43 638 aa11.6□□□□□ -0.55
SFR1-202ENST00000369729 PLEKHF1Q96S99 279 aa11.6□□□□□ -0.55
SFR1-202ENST00000369729 STRN4Q9NRL3 753 aa11.6□□□□□ -0.55
SFR1-202ENST00000369729 TATP17735 454 aaPredicted RBP11.59□□□□□ -0.55
SFR1-202ENST00000369729 PLEKHO1Q53GL0 409 aaPredicted RBP11.59□□□□□ -0.55
SFR1-202ENST00000369729 CARD10Q9BWT7 1032 aa11.59□□□□□ -0.55
SFR1-202ENST00000369729 COL5A2P05997 1499 aaPredicted RBP11.58□□□□□ -0.55
SFR1-202ENST00000369729 NFE2L2Q16236 605 aa11.58□□□□□ -0.56
SFR1-202ENST00000369729 CCDC27Q2M243 656 aa11.58□□□□□ -0.56
SFR1-202ENST00000369729 COL18A1P39060 1754 aa11.58□□□□□ -0.56
SFR1-202ENST00000369729 CRB1P82279 1406 aa11.57□□□□□ -0.56
SFR1-202ENST00000369729 TMPOP42166 694 aaKnown RBP11.57□□□□□ -0.56
SFR1-202ENST00000369729 RIPK4P57078 832 aa11.57□□□□□ -0.56
SFR1-202ENST00000369729 NEUROD2Q15784 382 aa11.57□□□□□ -0.56
SFR1-202ENST00000369729 AEBP1Q8IUX7 1158 aa11.57□□□□□ -0.56
SFR1-202ENST00000369729 RTF1Q92541 710 aaKnown RBP11.57□□□□□ -0.56
SFR1-202ENST00000369729 C8orf37Q96NL8 207 aa11.57□□□□□ -0.56
SFR1-202ENST00000369729 SALL2Q9Y467 1007 aaPredicted RBP11.57□□□□□ -0.56
SFR1-202ENST00000369729 LMO7Q8WWI1 1683 aa11.57□□□□□ -0.56
SFR1-202ENST00000369729 CAMTA1Q9Y6Y1 1673 aa11.57□□□□□ -0.56
SFR1-202ENST00000369729 RGPD1P0DJD0 1748 aa11.57□□□□□ -0.56
SFR1-202ENST00000369729 USHBP1Q8N6Y0 703 aa11.56□□□□□ -0.56
SFR1-202ENST00000369729 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.56□□□□□ -0.56
SFR1-202ENST00000369729 SPG7Q9UQ90 795 aa11.56□□□□□ -0.56
SFR1-202ENST00000369729 THRAP3Q9Y2W1 955 aaKnown RBP11.56□□□□□ -0.56
SFR1-202ENST00000369729 HTATSF1O43719 755 aaKnown RBP11.55□□□□□ -0.56
SFR1-202ENST00000369729 C1orf141Q5JVX7 400 aa11.55□□□□□ -0.56
SFR1-202ENST00000369729 LARP1Q6PKG0 1096 aaKnown RBP11.55□□□□□ -0.56
SFR1-202ENST00000369729 UNC5CLQ8IV45 518 aa11.55□□□□□ -0.56
SFR1-202ENST00000369729 CDCA7Q9BWT1 371 aaPredicted RBP11.55□□□□□ -0.56
SFR1-202ENST00000369729 CCDC9Q9Y3X0 531 aaKnown RBP11.55□□□□□ -0.56
SFR1-202ENST00000369729 NCAPD2Q15021 1401 aa11.55□□□□□ -0.56
SFR1-202ENST00000369729 IL2RBP14784 551 aa11.55□□□□□ -0.56
SFR1-202ENST00000369729 GOLGA2Q08379 1002 aa11.55□□□□□ -0.56
SFR1-202ENST00000369729 WDR63Q8IWG1 891 aa11.55□□□□□ -0.56
SFR1-202ENST00000369729 FNBP4Q8N3X1 1017 aaPredicted RBP11.55□□□□□ -0.56
SFR1-202ENST00000369729 PHACTR3Q96KR7 559 aa11.55□□□□□ -0.56
SFR1-202ENST00000369729 WWC1Q8IX03 1113 aa11.54□□□□□ -0.56
SFR1-202ENST00000369729 RRP7AQ9Y3A4 280 aaKnown RBP11.54□□□□□ -0.56
SFR1-202ENST00000369729 NWD2Q9ULI1 1742 aa11.54□□□□□ -0.56
SFR1-202ENST00000369729 RGPD5Q99666 1765 aa11.54□□□□□ -0.56
SFR1-202ENST00000369729 SLIT2O94813 1529 aa11.53□□□□□ -0.56
SFR1-202ENST00000369729 GNAT3A8MTJ3 354 aa11.53□□□□□ -0.56
SFR1-202ENST00000369729 E9PSI1 815 aa11.53□□□□□ -0.56
SFR1-202ENST00000369729 HSP90AB1P08238 724 aaKnown RBP11.53□□□□□ -0.56
SFR1-202ENST00000369729 USP21Q9UK80 565 aa11.53□□□□□ -0.56
SFR1-202ENST00000369729 VPS72Q15906 364 aa11.52□□□□□ -0.57
SFR1-202ENST00000369729 MTHFSDQ2M296 383 aaKnown RBP11.52□□□□□ -0.57
SFR1-202ENST00000369729 AKAP4Q5JQC9 854 aa11.52□□□□□ -0.57
SFR1-202ENST00000369729 ZNF530Q6P9A1 599 aaPredicted RBP11.52□□□□□ -0.57
SFR1-202ENST00000369729 MYH16Q9H6N6 1097 aa11.52□□□□□ -0.57
SFR1-202ENST00000369729 USP35Q9P2H5 1018 aa11.52□□□□□ -0.57
SFR1-202ENST00000369729 IL16Q14005 1332 aa11.52□□□□□ -0.57
SFR1-202ENST00000369729 PLCH1Q4KWH8 1693 aa11.51□□□□□ -0.57
SFR1-202ENST00000369729 ZCRB1Q8TBF4 217 aaKnown RBP11.51□□□□□ -0.57
SFR1-202ENST00000369729 MAP3K5Q99683 1374 aa11.5□□□□□ -0.57
SFR1-202ENST00000369729 IFNL2Q8IZJ0 200 aa11.5□□□□□ -0.57
SFR1-202ENST00000369729 LRP6O75581 1613 aa11.5□□□□□ -0.57
SFR1-202ENST00000369729 AFF2P51816 1311 aa11.5□□□□□ -0.57
SFR1-202ENST00000369729 SPATA31A1Q5TZJ5 1347 aa11.5□□□□□ -0.57
SFR1-202ENST00000369729 SPATA31A5Q5VU36 1347 aa11.5□□□□□ -0.57
SFR1-202ENST00000369729 SPATA31A7Q8IWB4 1347 aa11.5□□□□□ -0.57
SFR1-202ENST00000369729 ZNF521Q96K83 1311 aa11.5□□□□□ -0.57
SFR1-202ENST00000369729 PCDH11XQ9BZA7 1347 aa11.5□□□□□ -0.57
SFR1-202ENST00000369729 PCDH11YQ9BZA8 1340 aa11.5□□□□□ -0.57
SFR1-202ENST00000369729 ZNF772Q68DY9 489 aaPredicted RBP11.5□□□□□ -0.57
SFR1-202ENST00000369729 TRPC5Q9UL62 973 aaPredicted RBP11.5□□□□□ -0.57
SFR1-202ENST00000369729 TRIM35Q9UPQ4 493 aa11.5□□□□□ -0.57
SFR1-202ENST00000369729 OVOS2A0A0G2JMS6 1433 aa11.49□□□□□ -0.57
SFR1-202ENST00000369729 SENP3-EIF4A1A0A087X0R7 540 aa11.49□□□□□ -0.57
SFR1-202ENST00000369729 EXOC5O00471 708 aa11.49□□□□□ -0.57
SFR1-202ENST00000369729 GNAI1P63096 354 aa11.49□□□□□ -0.57
SFR1-202ENST00000369729 BARGINQ6ZT62 677 aa11.49□□□□□ -0.57
SFR1-202ENST00000369729 RGPD2P0DJD1 1756 aa11.48□□□□□ -0.57
SFR1-202ENST00000369729 PARP4Q9UKK3 1724 aaKnown RBP11.48□□□□□ -0.57
SFR1-202ENST00000369729 CREBZFQ9NS37 354 aa11.48□□□□□ -0.57
SFR1-202ENST00000369729 IFT57Q9NWB7 429 aa11.48□□□□□ -0.57
SFR1-202ENST00000369729 SLFN5Q08AF3 891 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms