RNA–Protein interactions for RNA: ENST00000368881.8

PSMD4-201, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 5 BASIC

Gene PSMD4, Length 1,333 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-201ENST00000368881 CSB-PGBD3P0DP91 1061 aa22.9■■□□□ 1.26
PSMD4-201ENST00000368881 RARSP54136 660 aaKnown RBP22.9■■□□□ 1.26
PSMD4-201ENST00000368881 IRX6P78412 446 aaPredicted RBP22.9■■□□□ 1.26
PSMD4-201ENST00000368881 EXOSC9Q06265 439 aaKnown RBP22.9■■□□□ 1.26
PSMD4-201ENST00000368881 TSR2Q969E8 191 aaKnown RBP22.9■■□□□ 1.26
PSMD4-201ENST00000368881 USHBP1Q8N6Y0 703 aa22.89■■□□□ 1.26
PSMD4-201ENST00000368881 CRB1P82279 1406 aa22.88■■□□□ 1.25
PSMD4-201ENST00000368881 COL16A1Q07092 1604 aaPredicted RBP22.88■■□□□ 1.25
PSMD4-201ENST00000368881 ALDH1L2Q3SY69 923 aa22.88■■□□□ 1.25
PSMD4-201ENST00000368881 AKAP4Q5JQC9 854 aa22.88■■□□□ 1.25
PSMD4-201ENST00000368881 RAPGEF4Q8WZA2 1011 aa22.88■■□□□ 1.25
PSMD4-201ENST00000368881 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.88■■□□□ 1.25
PSMD4-201ENST00000368881 LAS1LQ9Y4W2 734 aaKnown RBP22.88■■□□□ 1.25
PSMD4-201ENST00000368881 MS4A1P11836 297 aa22.87■■□□□ 1.25
PSMD4-201ENST00000368881 NLRP2Q9NX02 1062 aa22.87■■□□□ 1.25
PSMD4-201ENST00000368881 COL14A1Q05707 1796 aaKnown RBP22.87■■□□□ 1.25
PSMD4-201ENST00000368881 WDR17Q8IZU2 1322 aa22.87■■□□□ 1.25
PSMD4-201ENST00000368881 FAM83GA6ND36 823 aa22.86■■□□□ 1.25
PSMD4-201ENST00000368881 CHL1O00533 1208 aa22.86■■□□□ 1.25
PSMD4-201ENST00000368881 THUMPD2Q9BTF0 503 aaKnown RBP22.86■■□□□ 1.25
PSMD4-201ENST00000368881 MBIPQ9NS73 344 aa22.86■■□□□ 1.25
PSMD4-201ENST00000368881 COL5A2P05997 1499 aaPredicted RBP22.86■■□□□ 1.25
PSMD4-201ENST00000368881 TATP17735 454 aaPredicted RBP22.85■■□□□ 1.25
PSMD4-201ENST00000368881 PDE3AQ14432 1141 aa22.85■■□□□ 1.25
PSMD4-201ENST00000368881 CHRNA2Q15822 529 aa22.85■■□□□ 1.25
PSMD4-201ENST00000368881 C1orf141Q5JVX7 400 aa22.85■■□□□ 1.25
PSMD4-201ENST00000368881 PARP4Q9UKK3 1724 aaKnown RBP22.85■■□□□ 1.25
PSMD4-201ENST00000368881 CANXP27824 592 aaKnown RBP22.84■■□□□ 1.25
PSMD4-201ENST00000368881 MCM10Q7L590 875 aa22.84■■□□□ 1.25
PSMD4-201ENST00000368881 SOS1Q07889 1333 aaPredicted RBP22.84■■□□□ 1.25
PSMD4-201ENST00000368881 BRPF1P55201 1214 aaPredicted RBP22.83■■□□□ 1.25
PSMD4-201ENST00000368881 DCTN1Q14203 1278 aa22.83■■□□□ 1.25
PSMD4-201ENST00000368881 SPG7Q9UQ90 795 aa22.83■■□□□ 1.25
PSMD4-201ENST00000368881 KIF16BQ96L93 1317 aa22.83■■□□□ 1.25
PSMD4-201ENST00000368881 ZNF530Q6P9A1 599 aaPredicted RBP22.82■■□□□ 1.24
PSMD4-201ENST00000368881 CEMIPQ8WUJ3 1361 aa22.82■■□□□ 1.24
PSMD4-201ENST00000368881 PKD1L3Q7Z443 1732 aa22.82■■□□□ 1.24
PSMD4-201ENST00000368881 BCAR3O75815 825 aa22.82■■□□□ 1.24
PSMD4-201ENST00000368881 SMC4Q9NTJ3 1288 aa22.81■■□□□ 1.24
PSMD4-201ENST00000368881 UBAP1LF5GYI3 381 aa22.8■■□□□ 1.24
PSMD4-201ENST00000368881 IPO8O15397 1037 aaKnown RBP22.8■■□□□ 1.24
PSMD4-201ENST00000368881 PLIN1O60240 522 aa22.8■■□□□ 1.24
PSMD4-201ENST00000368881 AAMPQ13685 434 aa22.8■■□□□ 1.24
PSMD4-201ENST00000368881 CARD10Q9BWT7 1032 aa22.8■■□□□ 1.24
PSMD4-201ENST00000368881 ADAMTS7Q9UKP4 1686 aa22.79■■□□□ 1.24
PSMD4-201ENST00000368881 TAF7Q15545 349 aaPredicted RBP22.79■■□□□ 1.24
PSMD4-201ENST00000368881 TWISTNBQ3B726 338 aaPredicted RBP22.79■■□□□ 1.24
PSMD4-201ENST00000368881 CHMP4AQ9BY43 222 aa22.79■■□□□ 1.24
PSMD4-201ENST00000368881 TSPYL4Q9UJ04 414 aa22.79■■□□□ 1.24
PSMD4-201ENST00000368881 VAMP4O75379 141 aa22.78■■□□□ 1.24
PSMD4-201ENST00000368881 EVA1CP58658 441 aa22.78■■□□□ 1.24
PSMD4-201ENST00000368881 TOM1L2Q6ZVM7 507 aa22.78■■□□□ 1.24
PSMD4-201ENST00000368881 VIRMAQ69YN4 1812 aaKnown RBP22.77■■□□□ 1.24
PSMD4-201ENST00000368881 HSP90AB1P08238 724 aaKnown RBP22.77■■□□□ 1.24
PSMD4-201ENST00000368881 ZKSCAN2Q63HK3 967 aa22.77■■□□□ 1.24
PSMD4-201ENST00000368881 IL17REQ8NFR9 667 aa22.77■■□□□ 1.24
PSMD4-201ENST00000368881 MEGF6O75095 1541 aa22.76■■□□□ 1.23
PSMD4-201ENST00000368881 TEFQ10587 303 aa22.75■■□□□ 1.23
PSMD4-201ENST00000368881 EXOC6Q8TAG9 804 aa22.75■■□□□ 1.23
PSMD4-201ENST00000368881 SSH1Q8WYL5 1049 aa22.75■■□□□ 1.23
PSMD4-201ENST00000368881 PIP4K2BP78356 416 aa22.74■■□□□ 1.23
PSMD4-201ENST00000368881 IFNL2Q8IZJ0 200 aa22.74■■□□□ 1.23
PSMD4-201ENST00000368881 FRAT1Q92837 279 aaPredicted RBP22.74■■□□□ 1.23
PSMD4-201ENST00000368881 CCDC136Q96JN2 1154 aa22.74■■□□□ 1.23
PSMD4-201ENST00000368881 CRBNQ96SW2 442 aa22.74■■□□□ 1.23
PSMD4-201ENST00000368881 RNMTO43148 476 aaKnown RBP22.73■■□□□ 1.23
PSMD4-201ENST00000368881 CERKQ8TCT0 537 aa22.73■■□□□ 1.23
PSMD4-201ENST00000368881 ARHGAP45Q92619 1136 aa22.73■■□□□ 1.23
PSMD4-201ENST00000368881 KDM3BQ7LBC6 1761 aa22.73■■□□□ 1.23
PSMD4-201ENST00000368881 SCN11AQ9UI33 1791 aa22.72■■□□□ 1.23
PSMD4-201ENST00000368881 C8orf58Q8NAV2 365 aa22.71■■□□□ 1.23
PSMD4-201ENST00000368881 PLCH1Q4KWH8 1693 aa22.71■■□□□ 1.23
PSMD4-201ENST00000368881 PCDH11XQ9BZA7 1347 aa22.7■■□□□ 1.23
PSMD4-201ENST00000368881 PCDH11YQ9BZA8 1340 aa22.7■■□□□ 1.23
PSMD4-201ENST00000368881 NWD2Q9ULI1 1742 aa22.7■■□□□ 1.22
PSMD4-201ENST00000368881 HOXB7P09629 217 aa22.7■■□□□ 1.22
PSMD4-201ENST00000368881 IL2RBP14784 551 aa22.7■■□□□ 1.22
PSMD4-201ENST00000368881 ATF7IPQ6VMQ6 1270 aa22.7■■□□□ 1.22
PSMD4-201ENST00000368881 FTSJ3Q8IY81 847 aaKnown RBP22.7■■□□□ 1.22
PSMD4-201ENST00000368881 BCL2L13Q9BXK5 485 aa22.7■■□□□ 1.22
PSMD4-201ENST00000368881 JCADQ9P266 1359 aa22.7■■□□□ 1.22
PSMD4-201ENST00000368881 SIPA1L3O60292 1781 aaPredicted RBP22.7■■□□□ 1.22
PSMD4-201ENST00000368881 PHKG2P15735 406 aa22.69■■□□□ 1.22
PSMD4-201ENST00000368881 TSPYL6Q8N831 410 aa22.69■■□□□ 1.22
PSMD4-201ENST00000368881 BTG4Q9NY30 223 aa22.69■■□□□ 1.22
PSMD4-201ENST00000368881 C20orf194Q5TEA3 1177 aa22.68■■□□□ 1.22
PSMD4-201ENST00000368881 DZIP1LQ8IYY4 767 aaKnown RBP22.68■■□□□ 1.22
PSMD4-201ENST00000368881 MRPL50Q8N5N7 158 aaKnown RBP22.68■■□□□ 1.22
PSMD4-201ENST00000368881 CHMP4BQ9H444 224 aaKnown RBP22.68■■□□□ 1.22
PSMD4-201ENST00000368881 STRN4Q9NRL3 753 aa22.68■■□□□ 1.22
PSMD4-201ENST00000368881 CACNA1FO60840 1977 aa22.68■■□□□ 1.22
PSMD4-201ENST00000368881 MRC1P22897 1456 aa22.67■■□□□ 1.22
PSMD4-201ENST00000368881 DCAF5Q96JK2 942 aa22.67■■□□□ 1.22
PSMD4-201ENST00000368881 LARP1Q6PKG0 1096 aaKnown RBP22.66■■□□□ 1.22
PSMD4-201ENST00000368881 MPRIPQ6WCQ1 1025 aa22.66■■□□□ 1.22
PSMD4-201ENST00000368881 ZCRB1Q8TBF4 217 aaKnown RBP22.66■■□□□ 1.22
PSMD4-201ENST00000368881 NRAPQ86VF7 1730 aa22.65■■□□□ 1.22
PSMD4-201ENST00000368881 B4GALNT3Q6L9W6 998 aa22.65■■□□□ 1.22
PSMD4-201ENST00000368881 API5Q9BZZ5 524 aaKnown RBP22.65■■□□□ 1.22
PSMD4-201ENST00000368881 LGR6Q9HBX8 967 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms