RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 CARD10Q9BWT7 1032 aa13.4□□□□□ -0.26
NUP43-202ENST00000367402 THRAP3Q9Y2W1 955 aaKnown RBP13.4□□□□□ -0.26
NUP43-202ENST00000367402 KIF24Q5T7B8 1368 aa13.4□□□□□ -0.26
NUP43-202ENST00000367402 NPC1L1Q9UHC9 1359 aa13.4□□□□□ -0.26
NUP43-202ENST00000367402 CDK12Q9NYV4 1490 aaPredicted RBP13.4□□□□□ -0.26
NUP43-202ENST00000367402 GLI3P10071 1580 aa13.4□□□□□ -0.26
NUP43-202ENST00000367402 COL18A1P39060 1754 aa13.4□□□□□ -0.26
NUP43-202ENST00000367402 RGS12O14924 1447 aa13.39□□□□□ -0.27
NUP43-202ENST00000367402 LTN1O94822 1766 aa13.38□□□□□ -0.27
NUP43-202ENST00000367402 INSRP06213 1382 aa13.38□□□□□ -0.27
NUP43-202ENST00000367402 SMG6Q86US8 1419 aaKnown RBP13.38□□□□□ -0.27
NUP43-202ENST00000367402 MTHFSP49914 203 aa13.36□□□□□ -0.27
NUP43-202ENST00000367402 NBPF6Q5VWK0 638 aa13.36□□□□□ -0.27
NUP43-202ENST00000367402 KRT27Q7Z3Y8 459 aa13.36□□□□□ -0.27
NUP43-202ENST00000367402 NBPF4Q96M43 638 aa13.36□□□□□ -0.27
NUP43-202ENST00000367402 PDE3BQ13370 1112 aa13.35□□□□□ -0.27
NUP43-202ENST00000367402 USHBP1Q8N6Y0 703 aa13.35□□□□□ -0.27
NUP43-202ENST00000367402 CDCA7Q9BWT1 371 aaPredicted RBP13.35□□□□□ -0.27
NUP43-202ENST00000367402 ANKRD26Q9UPS8 1709 aa13.35□□□□□ -0.27
NUP43-202ENST00000367402 IL2RBP14784 551 aa13.34□□□□□ -0.27
NUP43-202ENST00000367402 EIF4A2Q14240 407 aaKnown RBP13.34□□□□□ -0.27
NUP43-202ENST00000367402 PEAK1Q9H792 1746 aa13.33□□□□□ -0.27
NUP43-202ENST00000367402 RGPD5Q99666 1765 aa13.33□□□□□ -0.28
NUP43-202ENST00000367402 EXOC5O00471 708 aa13.33□□□□□ -0.28
NUP43-202ENST00000367402 DDB1Q16531 1140 aa13.33□□□□□ -0.28
NUP43-202ENST00000367402 SOCS7O14512 581 aa13.32□□□□□ -0.28
NUP43-202ENST00000367402 PPP2R1AP30153 589 aa13.32□□□□□ -0.28
NUP43-202ENST00000367402 FAM182BQ5T319 152 aa13.32□□□□□ -0.28
NUP43-202ENST00000367402 EYA1Q99502 592 aa13.32□□□□□ -0.28
NUP43-202ENST00000367402 DIAPH1O60610 1272 aaKnown RBP13.3□□□□□ -0.28
NUP43-202ENST00000367402 IL13P35225 146 aa13.3□□□□□ -0.28
NUP43-202ENST00000367402 RALBP1Q15311 655 aa13.3□□□□□ -0.28
NUP43-202ENST00000367402 RAPGEF4Q8WZA2 1011 aa13.3□□□□□ -0.28
NUP43-202ENST00000367402 CFAP53Q96M91 514 aa13.3□□□□□ -0.28
NUP43-202ENST00000367402 MAP2P11137 1827 aaKnown RBP13.29□□□□□ -0.28
NUP43-202ENST00000367402 PARD3Q8TEW0 1356 aa13.29□□□□□ -0.28
NUP43-202ENST00000367402 DISP2A7MBM2 1401 aa13.29□□□□□ -0.28
NUP43-202ENST00000367402 THSD7AQ9UPZ6 1657 aa13.28□□□□□ -0.28
NUP43-202ENST00000367402 TATP17735 454 aaPredicted RBP13.28□□□□□ -0.28
NUP43-202ENST00000367402 FAM196AQ6ZSG2 479 aa13.27□□□□□ -0.29
NUP43-202ENST00000367402 MARCH10Q8NA82 808 aaPredicted RBP13.27□□□□□ -0.29
NUP43-202ENST00000367402 ZCRB1Q8TBF4 217 aaKnown RBP13.27□□□□□ -0.29
NUP43-202ENST00000367402 DDX54Q8TDD1 881 aaKnown RBP13.27□□□□□ -0.29
NUP43-202ENST00000367402 UPF1Q92900 1129 aaKnown RBP eCLIP13.27□□□□□ -0.29
NUP43-202ENST00000367402 U2SURPO15042 1029 aaKnown RBP13.26□□□□□ -0.29
NUP43-202ENST00000367402 SULT6B1Q6IMI4 303 aa13.26□□□□□ -0.29
NUP43-202ENST00000367402 IGSF1Q8N6C5 1336 aa13.26□□□□□ -0.29
NUP43-202ENST00000367402 FAM208AQ9UK61 1670 aaKnown RBP13.25□□□□□ -0.29
NUP43-202ENST00000367402 DCBLD2Q96PD2 775 aa13.25□□□□□ -0.29
NUP43-202ENST00000367402 MEGF6O75095 1541 aa13.24□□□□□ -0.29
NUP43-202ENST00000367402 MYBBP1AQ9BQG0 1328 aaKnown RBP13.24□□□□□ -0.29
NUP43-202ENST00000367402 HMOX1P09601 288 aa13.24□□□□□ -0.29
NUP43-202ENST00000367402 AEBP1Q8IUX7 1158 aa13.24□□□□□ -0.29
NUP43-202ENST00000367402 PRKRIP1Q9H875 184 aaPredicted RBP13.24□□□□□ -0.29
NUP43-202ENST00000367402 NUDCQ9Y266 331 aa13.24□□□□□ -0.29
NUP43-202ENST00000367402 TNS2Q63HR2 1409 aa13.23□□□□□ -0.29
NUP43-202ENST00000367402 PARP4Q9UKK3 1724 aaKnown RBP13.23□□□□□ -0.29
NUP43-202ENST00000367402 TRIM37O94972 964 aa13.23□□□□□ -0.29
NUP43-202ENST00000367402 POTEIP0CG38 1075 aa13.23□□□□□ -0.29
NUP43-202ENST00000367402 SF3B2Q13435 895 aaKnown RBP13.23□□□□□ -0.29
NUP43-202ENST00000367402 CCDC125Q86Z20 511 aa13.23□□□□□ -0.29
NUP43-202ENST00000367402 ZNF579Q8NAF0 562 aaKnown RBP13.23□□□□□ -0.29
NUP43-202ENST00000367402 SPG7Q9UQ90 795 aa13.23□□□□□ -0.29
NUP43-202ENST00000367402 BRWD3Q6RI45 1802 aa13.23□□□□□ -0.29
NUP43-202ENST00000367402 OVOS2A0A0G2JMS6 1433 aa13.22□□□□□ -0.29
NUP43-202ENST00000367402 NCAPD2Q15021 1401 aa13.22□□□□□ -0.29
NUP43-202ENST00000367402 RGPD2P0DJD1 1756 aa13.22□□□□□ -0.29
NUP43-202ENST00000367402 LRRC37A3O60309 1634 aa13.22□□□□□ -0.29
NUP43-202ENST00000367402 ANP32CO43423 234 aa13.22□□□□□ -0.29
NUP43-202ENST00000367402 PCDH11XQ9BZA7 1347 aa13.21□□□□□ -0.29
NUP43-202ENST00000367402 PCDH11YQ9BZA8 1340 aa13.21□□□□□ -0.29
NUP43-202ENST00000367402 U2AF1L5P0DN76 240 aaPredicted RBP13.21□□□□□ -0.29
NUP43-202ENST00000367402 U2AF1Q01081 240 aaKnown RBP eCLIP13.21□□□□□ -0.29
NUP43-202ENST00000367402 PLEKHO1Q53GL0 409 aaPredicted RBP13.21□□□□□ -0.29
NUP43-202ENST00000367402 CREBZFQ9NS37 354 aa13.21□□□□□ -0.29
NUP43-202ENST00000367402 COL3A1P02461 1466 aaPredicted RBP13.21□□□□□ -0.3
NUP43-202ENST00000367402 AMOTQ4VCS5 1084 aa13.2□□□□□ -0.3
NUP43-202ENST00000367402 ACSBG1Q96GR2 724 aa13.2□□□□□ -0.3
NUP43-202ENST00000367402 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.2□□□□□ -0.32e-8■□□□□ 8.7
NUP43-202ENST00000367402 WNK3Q9BYP7 1800 aa13.19□□□□□ -0.3
NUP43-202ENST00000367402 SPDYE4A6NLX3 237 aa13.19□□□□□ -0.3
NUP43-202ENST00000367402 CYP27B1O15528 508 aa13.19□□□□□ -0.3
NUP43-202ENST00000367402 KDRP35968 1356 aa13.19□□□□□ -0.3
NUP43-202ENST00000367402 APBA3O96018 575 aa13.18□□□□□ -0.3
NUP43-202ENST00000367402 IFNL2Q8IZJ0 200 aa13.18□□□□□ -0.3
NUP43-202ENST00000367402 SYTL4Q96C24 671 aaPredicted RBP13.18□□□□□ -0.3
NUP43-202ENST00000367402 BCL11BQ9C0K0 894 aaPredicted RBP13.18□□□□□ -0.3
NUP43-202ENST00000367402 BCL9O00512 1426 aa13.17□□□□□ -0.3
NUP43-202ENST00000367402 KCNQ2O43526 872 aa13.17□□□□□ -0.3
NUP43-202ENST00000367402 ZNF530Q6P9A1 599 aaPredicted RBP13.17□□□□□ -0.3
NUP43-202ENST00000367402 EP400Q96L91 3159 aa13.16□□□□□ -0.3
NUP43-202ENST00000367402 FCHSD2O94868 740 aa13.16□□□□□ -0.3
NUP43-202ENST00000367402 PHKG2P15735 406 aa13.16□□□□□ -0.3
NUP43-202ENST00000367402 PRKAR2BP31323 418 aa13.16□□□□□ -0.3
NUP43-202ENST00000367402 BAG6P46379 1132 aa13.16□□□□□ -0.3
NUP43-202ENST00000367402 PRIM1P49642 420 aaKnown RBP13.16□□□□□ -0.3
NUP43-202ENST00000367402 C1orf141Q5JVX7 400 aa13.16□□□□□ -0.3
NUP43-202ENST00000367402 PTF1AQ7RTS3 328 aa13.16□□□□□ -0.3
NUP43-202ENST00000367402 DEFB132Q7Z7B7 95 aa13.16□□□□□ -0.3
NUP43-202ENST00000367402 EN1Q05925 392 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms