RNA–Protein interactions for RNA: ENST00000367063.6

CD55-203, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 1,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-203ENST00000367063 CDCA7Q9BWT1 371 aaPredicted RBP26.88■■□□□ 1.89
CD55-203ENST00000367063 A0A0G2JS52 829 aa26.87■■□□□ 1.89
CD55-203ENST00000367063 NEFMP07197 916 aa26.87■■□□□ 1.89
CD55-203ENST00000367063 MYT1Q01538 1121 aa26.87■■□□□ 1.89
CD55-203ENST00000367063 RXRBP28702 533 aa26.86■■□□□ 1.89
CD55-203ENST00000367063 PLEKHF1Q96S99 279 aa26.86■■□□□ 1.89
CD55-203ENST00000367063 OVOS2A0A0G2JMS6 1433 aa26.85■■□□□ 1.89
CD55-203ENST00000367063 MAPK8IP3Q9UPT6 1336 aa26.85■■□□□ 1.89
CD55-203ENST00000367063 RUNDC1Q96C34 613 aa26.84■■□□□ 1.89
CD55-203ENST00000367063 PHACTR3Q96KR7 559 aa26.84■■□□□ 1.89
CD55-203ENST00000367063 ONECUT3O60422 494 aaPredicted RBP26.82■■□□□ 1.88
CD55-203ENST00000367063 PLEKHO1Q53GL0 409 aaPredicted RBP26.82■■□□□ 1.88
CD55-203ENST00000367063 AMOTQ4VCS5 1084 aa26.82■■□□□ 1.88
CD55-203ENST00000367063 THSD7AQ9UPZ6 1657 aa26.82■■□□□ 1.88
CD55-203ENST00000367063 EXOC5O00471 708 aa26.81■■□□□ 1.88
CD55-203ENST00000367063 ZCRB1Q8TBF4 217 aaKnown RBP26.81■■□□□ 1.88
CD55-203ENST00000367063 SPG7Q9UQ90 795 aa26.81■■□□□ 1.88
CD55-203ENST00000367063 PLEKHG2Q9H7P9 1386 aa26.81■■□□□ 1.88
CD55-203ENST00000367063 DDB1Q16531 1140 aa26.8■■□□□ 1.88
CD55-203ENST00000367063 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.8■■□□□ 1.881e-7■■■□□ 16.2
CD55-203ENST00000367063 LRRC37A3O60309 1634 aa26.8■■□□□ 1.88
CD55-203ENST00000367063 PKD1L3Q7Z443 1732 aa26.8■■□□□ 1.88
CD55-203ENST00000367063 SEPT12Q8IYM1 358 aa26.79■■□□□ 1.88
CD55-203ENST00000367063 MTHFSDQ2M296 383 aaKnown RBP26.79■■□□□ 1.88
CD55-203ENST00000367063 TNS2Q63HR2 1409 aa26.77■■□□□ 1.88
CD55-203ENST00000367063 ZNF530Q6P9A1 599 aaPredicted RBP26.76■■□□□ 1.87
CD55-203ENST00000367063 GAS2L2Q8NHY3 880 aa26.76■■□□□ 1.87
CD55-203ENST00000367063 PCDH11XQ9BZA7 1347 aa26.76■■□□□ 1.87
CD55-203ENST00000367063 PCDH11YQ9BZA8 1340 aa26.76■■□□□ 1.87
CD55-203ENST00000367063 DDX54Q8TDD1 881 aaKnown RBP26.76■■□□□ 1.87
CD55-203ENST00000367063 SHANK3Q9BYB0 1731 aa26.75■■□□□ 1.87
CD55-203ENST00000367063 APAF1O14727 1248 aa26.75■■□□□ 1.87
CD55-203ENST00000367063 SENP3-EIF4A1A0A087X0R7 540 aa26.74■■□□□ 1.87
CD55-203ENST00000367063 PDE3BQ13370 1112 aa26.73■■□□□ 1.87
CD55-203ENST00000367063 C1orf141Q5JVX7 400 aa26.73■■□□□ 1.87
CD55-203ENST00000367063 NFE2L2Q16236 605 aa26.73■■□□□ 1.87
CD55-203ENST00000367063 RRP7AQ9Y3A4 280 aaKnown RBP26.73■■□□□ 1.87
CD55-203ENST00000367063 RGS12O14924 1447 aa26.72■■□□□ 1.87
CD55-203ENST00000367063 CYP27B1O15528 508 aa26.72■■□□□ 1.87
CD55-203ENST00000367063 TMPOP42166 694 aaKnown RBP26.72■■□□□ 1.87
CD55-203ENST00000367063 NEUROD2Q15784 382 aa26.72■■□□□ 1.87
CD55-203ENST00000367063 IFNL2Q8IZJ0 200 aa26.72■■□□□ 1.87
CD55-203ENST00000367063 PHKG2P15735 406 aa26.7■■□□□ 1.87
CD55-203ENST00000367063 AKAP4Q5JQC9 854 aa26.7■■□□□ 1.87
CD55-203ENST00000367063 BRWD3Q6RI45 1802 aa26.7■■□□□ 1.86
CD55-203ENST00000367063 RIPK4P57078 832 aa26.7■■□□□ 1.86
CD55-203ENST00000367063 DLG5Q8TDM6 1919 aa26.69■■□□□ 1.86
CD55-203ENST00000367063 MAP3K5Q99683 1374 aa26.68■■□□□ 1.86
CD55-203ENST00000367063 MARCH10Q8NA82 808 aaPredicted RBP26.68■■□□□ 1.86
CD55-203ENST00000367063 GNAT3A8MTJ3 354 aa26.67■■□□□ 1.86
CD55-203ENST00000367063 KRT27Q7Z3Y8 459 aa26.66■■□□□ 1.86
CD55-203ENST00000367063 SALL2Q9Y467 1007 aaPredicted RBP26.66■■□□□ 1.86
CD55-203ENST00000367063 HSP90AB1P08238 724 aaKnown RBP26.65■■□□□ 1.86
CD55-203ENST00000367063 RTF1Q92541 710 aaKnown RBP26.65■■□□□ 1.86
CD55-203ENST00000367063 MPRIPQ6WCQ1 1025 aa26.64■■□□□ 1.86
CD55-203ENST00000367063 FAM182BQ5T319 152 aa26.63■■□□□ 1.85
CD55-203ENST00000367063 LMOD3Q0VAK6 560 aa26.63■■□□□ 1.85
CD55-203ENST00000367063 NKX1-1Q15270 411 aaPredicted RBP26.63■■□□□ 1.85
CD55-203ENST00000367063 HNRNPUQ00839 825 aaKnown RBP eCLIP26.62■■□□□ 1.85
CD55-203ENST00000367063 DCAF5Q96JK2 942 aa26.62■■□□□ 1.85
CD55-203ENST00000367063 HTATSF1O43719 755 aaKnown RBP26.61■■□□□ 1.85
CD55-203ENST00000367063 MCM10Q7L590 875 aa26.61■■□□□ 1.85
CD55-203ENST00000367063 DCTN1Q14203 1278 aa26.6■■□□□ 1.85
CD55-203ENST00000367063 LGR6Q9HBX8 967 aa26.6■■□□□ 1.85
CD55-203ENST00000367063 TRIM35Q9UPQ4 493 aa26.6■■□□□ 1.85
CD55-203ENST00000367063 KDM6AO15550 1401 aaPredicted RBP26.6■■□□□ 1.85
CD55-203ENST00000367063 VIRMAQ69YN4 1812 aaKnown RBP26.59■■□□□ 1.85
CD55-203ENST00000367063 RNMTO43148 476 aaKnown RBP26.59■■□□□ 1.85
CD55-203ENST00000367063 IL17REQ8NFR9 667 aa26.59■■□□□ 1.85
CD55-203ENST00000367063 NGEFQ8N5V2 710 aa26.58■■□□□ 1.85
CD55-203ENST00000367063 SCN11AQ9UI33 1791 aa26.58■■□□□ 1.85
CD55-203ENST00000367063 NCBP3Q53F19 620 aaKnown RBP26.57■■□□□ 1.84
CD55-203ENST00000367063 CCDC27Q2M243 656 aa26.57■■□□□ 1.84
CD55-203ENST00000367063 THUMPD2Q9BTF0 503 aaKnown RBP26.57■■□□□ 1.84
CD55-203ENST00000367063 KAT6BQ8WYB5 2073 aa26.56■■□□□ 1.84
CD55-203ENST00000367063 ADAMTS7Q9UKP4 1686 aa26.55■■□□□ 1.84
CD55-203ENST00000367063 WWC1Q8IX03 1113 aa26.55■■□□□ 1.84
CD55-203ENST00000367063 YTHDC1Q96MU7 727 aaKnown RBP26.55■■□□□ 1.84
CD55-203ENST00000367063 DOT1LQ8TEK3 1739 aa26.55■■□□□ 1.84
CD55-203ENST00000367063 TOGARAM1Q9Y4F4 1720 aa26.55■■□□□ 1.84
CD55-203ENST00000367063 FAM196AQ6ZSG2 479 aa26.54■■□□□ 1.84
CD55-203ENST00000367063 ACSBG1Q96GR2 724 aa26.54■■□□□ 1.84
CD55-203ENST00000367063 CEMIPQ8WUJ3 1361 aa26.54■■□□□ 1.84
CD55-203ENST00000367063 ERVV-2B6SEH9 535 aa26.53■■□□□ 1.84
CD55-203ENST00000367063 BCL9O00512 1426 aa26.53■■□□□ 1.84
CD55-203ENST00000367063 SYTL4Q96C24 671 aaPredicted RBP26.53■■□□□ 1.84
CD55-203ENST00000367063 TEFQ10587 303 aa26.52■■□□□ 1.84
CD55-203ENST00000367063 PRIM1P49642 420 aaKnown RBP26.51■■□□□ 1.83
CD55-203ENST00000367063 CABP4P57796 275 aa26.51■■□□□ 1.83
CD55-203ENST00000367063 EP400Q96L91 3159 aa26.51■■□□□ 1.83
CD55-203ENST00000367063 SLC52A2Q9HAB3 445 aa26.5■■□□□ 1.83
CD55-203ENST00000367063 NFATC2IPQ8NCF5 419 aa26.5■■□□□ 1.83
CD55-203ENST00000367063 ITGB4P16144 1822 aa26.49■■□□□ 1.83
CD55-203ENST00000367063 TMOD3Q9NYL9 352 aa26.49■■□□□ 1.83
CD55-203ENST00000367063 MRC1P22897 1456 aa26.48■■□□□ 1.83
CD55-203ENST00000367063 SBF2Q86WG5 1849 aa26.48■■□□□ 1.83
CD55-203ENST00000367063 KCNQ2O43526 872 aa26.48■■□□□ 1.83
CD55-203ENST00000367063 CALD1Q05682 793 aaKnown RBP26.48■■□□□ 1.83
CD55-203ENST00000367063 ZNF521Q96K83 1311 aa26.47■■□□□ 1.83
CD55-203ENST00000367063 WDR63Q8IWG1 891 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms