RNA–Protein interactions for RNA: ENST00000366860.9

CNIH4-204, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 3

Gene CNIH4, Length 912 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-204ENST00000366860 DISP2A7MBM2 1401 aa20.68■□□□□ 0.9
CNIH4-204ENST00000366860 LRRC37A3O60309 1634 aa20.67■□□□□ 0.9
CNIH4-204ENST00000366860 TATP17735 454 aaPredicted RBP20.67■□□□□ 0.9
CNIH4-204ENST00000366860 CCDC146Q8IYE0 955 aa20.67■□□□□ 0.9
CNIH4-204ENST00000366860 TCP11L2Q8N4U5 519 aa20.67■□□□□ 0.9
CNIH4-204ENST00000366860 PLEKHF1Q96S99 279 aa20.67■□□□□ 0.9
CNIH4-204ENST00000366860 TRPC5Q9UL62 973 aaPredicted RBP20.67■□□□□ 0.9
CNIH4-204ENST00000366860 GLI3P10071 1580 aa20.67■□□□□ 0.9
CNIH4-204ENST00000366860 SHANK3Q9BYB0 1731 aa20.67■□□□□ 0.9
CNIH4-204ENST00000366860 ZNF772Q68DY9 489 aaPredicted RBP20.66■□□□□ 0.9
CNIH4-204ENST00000366860 NGEFQ8N5V2 710 aa20.66■□□□□ 0.9
CNIH4-204ENST00000366860 CDCA7Q9BWT1 371 aaPredicted RBP20.66■□□□□ 0.9
CNIH4-204ENST00000366860 CCDC9Q9Y3X0 531 aaKnown RBP20.66■□□□□ 0.9
CNIH4-204ENST00000366860 THSD7AQ9UPZ6 1657 aa20.66■□□□□ 0.9
CNIH4-204ENST00000366860 IL2RBP14784 551 aa20.65■□□□□ 0.9
CNIH4-204ENST00000366860 GAS2L2Q8NHY3 880 aa20.65■□□□□ 0.9
CNIH4-204ENST00000366860 TNS2Q63HR2 1409 aa20.64■□□□□ 0.89
CNIH4-204ENST00000366860 AMOTQ4VCS5 1084 aa20.64■□□□□ 0.89
CNIH4-204ENST00000366860 USP35Q9P2H5 1018 aa20.64■□□□□ 0.89
CNIH4-204ENST00000366860 VIRMAQ69YN4 1812 aaKnown RBP20.64■□□□□ 0.89
CNIH4-204ENST00000366860 BARGINQ6ZT62 677 aa20.63■□□□□ 0.89
CNIH4-204ENST00000366860 ILDR1Q86SU0 546 aaPredicted RBP20.63■□□□□ 0.89
CNIH4-204ENST00000366860 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.63■□□□□ 0.89
CNIH4-204ENST00000366860 PLEKHO1Q53GL0 409 aaPredicted RBP20.62■□□□□ 0.89
CNIH4-204ENST00000366860 HNRNPUQ00839 825 aaKnown RBP eCLIP20.61■□□□□ 0.89
CNIH4-204ENST00000366860 APAF1O14727 1248 aa20.6■□□□□ 0.89
CNIH4-204ENST00000366860 LMOD3Q0VAK6 560 aa20.6■□□□□ 0.89
CNIH4-204ENST00000366860 NFE2L2Q16236 605 aa20.6■□□□□ 0.89
CNIH4-204ENST00000366860 SPG7Q9UQ90 795 aa20.6■□□□□ 0.89
CNIH4-204ENST00000366860 PCDH11XQ9BZA7 1347 aa20.59■□□□□ 0.89
CNIH4-204ENST00000366860 PCDH11YQ9BZA8 1340 aa20.59■□□□□ 0.89
CNIH4-204ENST00000366860 GJD4Q96KN9 370 aaPredicted RBP20.59■□□□□ 0.89
CNIH4-204ENST00000366860 PHACTR3Q96KR7 559 aa20.59■□□□□ 0.89
CNIH4-204ENST00000366860 MAP3K5Q99683 1374 aa20.59■□□□□ 0.89
CNIH4-204ENST00000366860 ADAMTS7Q9UKP4 1686 aa20.58■□□□□ 0.89
CNIH4-204ENST00000366860 TMPOP42166 694 aaKnown RBP20.58■□□□□ 0.89
CNIH4-204ENST00000366860 ZBED9Q6R2W3 1325 aa20.57■□□□□ 0.88
CNIH4-204ENST00000366860 SCN11AQ9UI33 1791 aa20.57■□□□□ 0.88
CNIH4-204ENST00000366860 MTHFSDQ2M296 383 aaKnown RBP20.56■□□□□ 0.88
CNIH4-204ENST00000366860 C1orf141Q5JVX7 400 aa20.56■□□□□ 0.88
CNIH4-204ENST00000366860 ZNF530Q6P9A1 599 aaPredicted RBP20.56■□□□□ 0.88
CNIH4-204ENST00000366860 CCDC27Q2M243 656 aa20.55■□□□□ 0.88
CNIH4-204ENST00000366860 ZCRB1Q8TBF4 217 aaKnown RBP20.55■□□□□ 0.88
CNIH4-204ENST00000366860 QTRT2Q9H974 415 aaKnown RBP20.55■□□□□ 0.88
CNIH4-204ENST00000366860 RIPK4P57078 832 aa20.54■□□□□ 0.88
CNIH4-204ENST00000366860 FAM98CQ17RN3 349 aaKnown RBP20.54■□□□□ 0.88
CNIH4-204ENST00000366860 AKAP4Q5JQC9 854 aa20.54■□□□□ 0.88
CNIH4-204ENST00000366860 YTHDC1Q96MU7 727 aaKnown RBP20.54■□□□□ 0.88
CNIH4-204ENST00000366860 HTATSF1O43719 755 aaKnown RBP20.53■□□□□ 0.88
CNIH4-204ENST00000366860 HSP90AB1P08238 724 aaKnown RBP20.53■□□□□ 0.88
CNIH4-204ENST00000366860 DDB1Q16531 1140 aa20.53■□□□□ 0.88
CNIH4-204ENST00000366860 RRP7AQ9Y3A4 280 aaKnown RBP20.53■□□□□ 0.88
CNIH4-204ENST00000366860 GNAT3A8MTJ3 354 aa20.52■□□□□ 0.88
CNIH4-204ENST00000366860 RBM6P78332 1123 aaKnown RBP20.52■□□□□ 0.88
CNIH4-204ENST00000366860 IFNL2Q8IZJ0 200 aa20.52■□□□□ 0.88
CNIH4-204ENST00000366860 RTF1Q92541 710 aaKnown RBP20.52■□□□□ 0.88
CNIH4-204ENST00000366860 A0A0G2JS52 829 aa20.51■□□□□ 0.87
CNIH4-204ENST00000366860 EXOC5O00471 708 aa20.51■□□□□ 0.87
CNIH4-204ENST00000366860 MYT1Q01538 1121 aa20.51■□□□□ 0.87
CNIH4-204ENST00000366860 CALD1Q05682 793 aaKnown RBP20.51■□□□□ 0.87
CNIH4-204ENST00000366860 NEUROD2Q15784 382 aa20.51■□□□□ 0.87
CNIH4-204ENST00000366860 MRC1P22897 1456 aa20.5■□□□□ 0.87
CNIH4-204ENST00000366860 DOT1LQ8TEK3 1739 aa20.5■□□□□ 0.87
CNIH4-204ENST00000366860 SIPA1L3O60292 1781 aaPredicted RBP20.5■□□□□ 0.87
CNIH4-204ENST00000366860 PHKG2P15735 406 aa20.5■□□□□ 0.87
CNIH4-204ENST00000366860 TOGARAM1Q9Y4F4 1720 aa20.49■□□□□ 0.87
CNIH4-204ENST00000366860 BRWD3Q6RI45 1802 aa20.48■□□□□ 0.87
CNIH4-204ENST00000366860 ONECUT3O60422 494 aaPredicted RBP20.48■□□□□ 0.87
CNIH4-204ENST00000366860 ZNF521Q96K83 1311 aa20.48■□□□□ 0.87
CNIH4-204ENST00000366860 CEMIPQ8WUJ3 1361 aa20.47■□□□□ 0.87
CNIH4-204ENST00000366860 KDM6AO15550 1401 aaPredicted RBP20.47■□□□□ 0.87
CNIH4-204ENST00000366860 CYP27B1O15528 508 aa20.47■□□□□ 0.87
CNIH4-204ENST00000366860 WWC1Q8IX03 1113 aa20.47■□□□□ 0.87
CNIH4-204ENST00000366860 TRIM35Q9UPQ4 493 aa20.47■□□□□ 0.87
CNIH4-204ENST00000366860 DCAF5Q96JK2 942 aa20.46■□□□□ 0.87
CNIH4-204ENST00000366860 SALL2Q9Y467 1007 aaPredicted RBP20.46■□□□□ 0.87
CNIH4-204ENST00000366860 RXRBP28702 533 aa20.45■□□□□ 0.86
CNIH4-204ENST00000366860 WDR63Q8IWG1 891 aa20.45■□□□□ 0.86
CNIH4-204ENST00000366860 IL16Q14005 1332 aa20.45■□□□□ 0.86
CNIH4-204ENST00000366860 RGS12O14924 1447 aa20.44■□□□□ 0.86
CNIH4-204ENST00000366860 ITGB4P16144 1822 aa20.44■□□□□ 0.86
CNIH4-204ENST00000366860 PDE3BQ13370 1112 aa20.44■□□□□ 0.86
CNIH4-204ENST00000366860 NKX1-1Q15270 411 aaPredicted RBP20.44■□□□□ 0.86
CNIH4-204ENST00000366860 DDX54Q8TDD1 881 aaKnown RBP20.44■□□□□ 0.86
CNIH4-204ENST00000366860 RGS17Q9UGC6 210 aaPredicted RBP20.44■□□□□ 0.86
CNIH4-204ENST00000366860 KDM3BQ7LBC6 1761 aa20.44■□□□□ 0.86
CNIH4-204ENST00000366860 SENP3-EIF4A1A0A087X0R7 540 aa20.43■□□□□ 0.86
CNIH4-204ENST00000366860 SEPT12Q8IYM1 358 aa20.43■□□□□ 0.86
CNIH4-204ENST00000366860 BCL9O00512 1426 aa20.43■□□□□ 0.86
CNIH4-204ENST00000366860 NHSQ6T4R5 1651 aa20.42■□□□□ 0.86
CNIH4-204ENST00000366860 MCM10Q7L590 875 aa20.42■□□□□ 0.86
CNIH4-204ENST00000366860 PAPPAQ13219 1627 aa20.42■□□□□ 0.86
CNIH4-204ENST00000366860 RNMTO43148 476 aaKnown RBP20.41■□□□□ 0.86
CNIH4-204ENST00000366860 GOLGA2Q08379 1002 aa20.41■□□□□ 0.86
CNIH4-204ENST00000366860 TEFQ10587 303 aa20.41■□□□□ 0.86
CNIH4-204ENST00000366860 MPRIPQ6WCQ1 1025 aa20.41■□□□□ 0.86
CNIH4-204ENST00000366860 SBF2Q86WG5 1849 aa20.4■□□□□ 0.86
CNIH4-204ENST00000366860 KAT6BQ8WYB5 2073 aa20.4■□□□□ 0.86
CNIH4-204ENST00000366860 E9PSI1 815 aa20.39■□□□□ 0.85
CNIH4-204ENST00000366860 DCTN1Q14203 1278 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms