RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 PLCH2O75038 1416 aa14.01□□□□□ -0.17
CDC42BPA-202ENST00000366764 C14orf93Q9H972 538 aaKnown RBP14□□□□□ -0.17
CDC42BPA-202ENST00000366764 NOS1P29475 1434 aa14□□□□□ -0.17
CDC42BPA-202ENST00000366764 LARP1BQ659C4 914 aaKnown RBP14□□□□□ -0.17
CDC42BPA-202ENST00000366764 NECTIN2Q92692 538 aa14□□□□□ -0.17
CDC42BPA-202ENST00000366764 ZNF608Q9ULD9 1512 aaPredicted RBP14□□□□□ -0.17
CDC42BPA-202ENST00000366764 MAP3K11Q16584 847 aa14□□□□□ -0.17
CDC42BPA-202ENST00000366764 AK7Q96M32 723 aa14□□□□□ -0.17
CDC42BPA-202ENST00000366764 AMOTL1Q8IY63 956 aa14□□□□□ -0.17
CDC42BPA-202ENST00000366764 GLRX3O76003 335 aaKnown RBP14□□□□□ -0.17
CDC42BPA-202ENST00000366764 NUP62CLQ9H1M0 184 aa14□□□□□ -0.17
CDC42BPA-202ENST00000366764 BLOC1S2Q6QNY1 142 aa14□□□□□ -0.17
CDC42BPA-202ENST00000366764 KIF1BPQ96EK5 621 aa14□□□□□ -0.17
CDC42BPA-202ENST00000366764 APPP05067 770 aa13.99□□□□□ -0.17
CDC42BPA-202ENST00000366764 NFXL1Q6ZNB6 911 aa13.99□□□□□ -0.17
CDC42BPA-202ENST00000366764 EIF4G3O43432 1585 aaKnown RBP13.99□□□□□ -0.17
CDC42BPA-202ENST00000366764 SYCE3A1L190 88 aa13.99□□□□□ -0.17
CDC42BPA-202ENST00000366764 PES1O00541 588 aaKnown RBP13.99□□□□□ -0.17
CDC42BPA-202ENST00000366764 SYNMO15061 1565 aa13.99□□□□□ -0.17
CDC42BPA-202ENST00000366764 DYNC1I1O14576 645 aa13.99□□□□□ -0.17
CDC42BPA-202ENST00000366764 NEMFO60524 1076 aa13.99□□□□□ -0.17
CDC42BPA-202ENST00000366764 CBFA2T2O43439 604 aa13.98□□□□□ -0.17
CDC42BPA-202ENST00000366764 TBC1D9Q6ZT07 1266 aa13.98□□□□□ -0.17
CDC42BPA-202ENST00000366764 CDKL5O76039 1030 aa13.98□□□□□ -0.17
CDC42BPA-202ENST00000366764 PKNOX2Q96KN3 472 aa13.98□□□□□ -0.17
CDC42BPA-202ENST00000366764 ANAPC15P60006 121 aa13.98□□□□□ -0.17
CDC42BPA-202ENST00000366764 KDM5DQ9BY66 1539 aa13.98□□□□□ -0.17
CDC42BPA-202ENST00000366764 STK38Q15208 465 aa13.97□□□□□ -0.17
CDC42BPA-202ENST00000366764 UVSSAQ2YD98 709 aa13.97□□□□□ -0.17
CDC42BPA-202ENST00000366764 ABCC2Q92887 1545 aa13.97□□□□□ -0.17
CDC42BPA-202ENST00000366764 SPATA32Q96LK8 384 aa13.97□□□□□ -0.17
CDC42BPA-202ENST00000366764 DACH1Q9UI36 760 aa13.97□□□□□ -0.17
CDC42BPA-202ENST00000366764 PDRG1Q9NUG6 133 aa13.97□□□□□ -0.17
CDC42BPA-202ENST00000366764 CTAGE5O15320 804 aa13.96□□□□□ -0.17
CDC42BPA-202ENST00000366764 SRGAP3O43295 1099 aa13.96□□□□□ -0.17
CDC42BPA-202ENST00000366764 CREBRFQ8IUR6 639 aa13.96□□□□□ -0.17
CDC42BPA-202ENST00000366764 SMARCE1Q969G3 411 aa13.96□□□□□ -0.17
CDC42BPA-202ENST00000366764 TMX4Q9H1E5 349 aaPredicted RBP13.96□□□□□ -0.17
CDC42BPA-202ENST00000366764 CDR1P51861 262 aa13.96□□□□□ -0.17
CDC42BPA-202ENST00000366764 PRIMPOLQ96LW4 560 aa13.96□□□□□ -0.17
CDC42BPA-202ENST00000366764 CTNNA3Q9UI47 895 aa13.96□□□□□ -0.17
CDC42BPA-202ENST00000366764 BAG4O95429 457 aaKnown RBP13.96□□□□□ -0.17
CDC42BPA-202ENST00000366764 ABTB2Q8N961 1025 aa13.96□□□□□ -0.18
CDC42BPA-202ENST00000366764 ZNF518AQ6AHZ1 1483 aa13.96□□□□□ -0.18
CDC42BPA-202ENST00000366764 TBC1D2BQ9UPU7 963 aa13.95□□□□□ -0.18
CDC42BPA-202ENST00000366764 SMC2O95347 1197 aa13.95□□□□□ -0.18
CDC42BPA-202ENST00000366764 SMC5Q8IY18 1101 aa13.95□□□□□ -0.18
CDC42BPA-202ENST00000366764 PER1O15534 1290 aaPredicted RBP13.95□□□□□ -0.18
CDC42BPA-202ENST00000366764 CD109Q6YHK3 1445 aa13.95□□□□□ -0.18
CDC42BPA-202ENST00000366764 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.95□□□□□ -0.181e-6■■■□□ 17.5
CDC42BPA-202ENST00000366764 IGHDP01880 384 aa13.95□□□□□ -0.18
CDC42BPA-202ENST00000366764 TTC22Q5TAA0 569 aa13.95□□□□□ -0.18
CDC42BPA-202ENST00000366764 ADGRF5Q8IZF2 1346 aa13.95□□□□□ -0.18
CDC42BPA-202ENST00000366764 LIMCH1Q9UPQ0 1083 aa13.95□□□□□ -0.18
CDC42BPA-202ENST00000366764 RUFY1Q96T51 708 aa13.94□□□□□ -0.18
CDC42BPA-202ENST00000366764 FILIP1LQ4L180 1135 aa13.94□□□□□ -0.18
CDC42BPA-202ENST00000366764 TXLNBQ8N3L3 684 aa13.94□□□□□ -0.18
CDC42BPA-202ENST00000366764 NOL10Q9BSC4 688 aaKnown RBP13.94□□□□□ -0.18
CDC42BPA-202ENST00000366764 A2MP01023 1474 aa13.94□□□□□ -0.18
CDC42BPA-202ENST00000366764 CEP89Q96ST8 783 aa13.94□□□□□ -0.18
CDC42BPA-202ENST00000366764 KDM2BQ8NHM5 1336 aa13.94□□□□□ -0.18
CDC42BPA-202ENST00000366764 SHROOM2Q13796 1616 aa13.94□□□□□ -0.18
CDC42BPA-202ENST00000366764 FAM69CQ0P6D2 419 aa13.94□□□□□ -0.18
CDC42BPA-202ENST00000366764 ME1P48163 572 aa13.94□□□□□ -0.18
CDC42BPA-202ENST00000366764 GNAT3A8MTJ3 354 aa13.94□□□□□ -0.18
CDC42BPA-202ENST00000366764 CASTP20810 708 aaKnown RBP13.93□□□□□ -0.18
CDC42BPA-202ENST00000366764 GTF2E1P29083 439 aaPredicted RBP13.93□□□□□ -0.18
CDC42BPA-202ENST00000366764 DISP1Q96F81 1524 aa13.93□□□□□ -0.18
CDC42BPA-202ENST00000366764 NEUROD6Q96NK8 337 aa13.93□□□□□ -0.18
CDC42BPA-202ENST00000366764 POGZQ7Z3K3 1410 aa13.93□□□□□ -0.18
CDC42BPA-202ENST00000366764 SMTNL1A8MU46 457 aa13.93□□□□□ -0.18
CDC42BPA-202ENST00000366764 ERLIN1O75477 346 aa13.92□□□□□ -0.18
CDC42BPA-202ENST00000366764 HMGB1P09429 215 aaKnown RBP13.92□□□□□ -0.18
CDC42BPA-202ENST00000366764 JAKMIP1Q96N16 626 aaKnown RBP13.92□□□□□ -0.18
CDC42BPA-202ENST00000366764 MARCH6O60337 910 aa13.92□□□□□ -0.18
CDC42BPA-202ENST00000366764 TXLNAP40222 546 aa13.92□□□□□ -0.18
CDC42BPA-202ENST00000366764 UBE2HP62256 183 aa13.92□□□□□ -0.18
CDC42BPA-202ENST00000366764 ABCC10Q5T3U5 1492 aa13.92□□□□□ -0.18
CDC42BPA-202ENST00000366764 PCDHB15Q9Y5E8 787 aa13.92□□□□□ -0.18
CDC42BPA-202ENST00000366764 WASHC4Q2M389 1173 aa13.92□□□□□ -0.18
CDC42BPA-202ENST00000366764 DDX19AQ9NUU7 478 aaKnown RBP13.92□□□□□ -0.18
CDC42BPA-202ENST00000366764 SSFA2P28290 1259 aa13.92□□□□□ -0.18
CDC42BPA-202ENST00000366764 TRIM22Q8IYM9 498 aa13.92□□□□□ -0.18
CDC42BPA-202ENST00000366764 AACSQ86V21 672 aa13.91□□□□□ -0.18
CDC42BPA-202ENST00000366764 NUDT16Q96DE0 195 aaKnown RBP13.91□□□□□ -0.18
CDC42BPA-202ENST00000366764 XRCC6P12956 609 aaKnown RBP eCLIP13.91□□□□□ -0.18
CDC42BPA-202ENST00000366764 ZSCAN25Q6NSZ9 544 aa13.91□□□□□ -0.18
CDC42BPA-202ENST00000366764 SPC24Q8NBT2 197 aa13.91□□□□□ -0.18
CDC42BPA-202ENST00000366764 EIF3JO75822 258 aaKnown RBP13.91□□□□□ -0.18
CDC42BPA-202ENST00000366764 U3KPZ7 1027 aaPredicted RBP13.91□□□□□ -0.18
CDC42BPA-202ENST00000366764 THEMISQ8N1K5 641 aaPredicted RBP13.91□□□□□ -0.18
CDC42BPA-202ENST00000366764 RAB3GAP1Q15042 981 aa13.9□□□□□ -0.18
CDC42BPA-202ENST00000366764 ZNF530Q6P9A1 599 aaPredicted RBP13.9□□□□□ -0.18
CDC42BPA-202ENST00000366764 IQCEQ6IPM2 695 aa13.9□□□□□ -0.18
CDC42BPA-202ENST00000366764 CCDC9Q9Y3X0 531 aaKnown RBP13.9□□□□□ -0.18
CDC42BPA-202ENST00000366764 TARBP1Q13395 1621 aaKnown RBP13.9□□□□□ -0.18
CDC42BPA-202ENST00000366764 VPS37DQ86XT2 251 aa13.9□□□□□ -0.18
CDC42BPA-202ENST00000366764 KIF18AQ8NI77 898 aa13.9□□□□□ -0.18
CDC42BPA-202ENST00000366764 HMG20BQ9P0W2 317 aa13.89□□□□□ -0.19
CDC42BPA-202ENST00000366764 SOS1Q07889 1333 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms