RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 ATP8B1O43520 1251 aa13.84□□□□□ -0.19
CNOT4-203ENST00000361528 BRD1O95696 1058 aa13.84□□□□□ -0.19
CNOT4-203ENST00000361528 H2AFXP16104 143 aaPredicted RBP13.84□□□□□ -0.19
CNOT4-203ENST00000361528 TRDNQ13061 729 aa13.84□□□□□ -0.19
CNOT4-203ENST00000361528 FBXO18Q8NFZ0 1043 aa13.84□□□□□ -0.19
CNOT4-203ENST00000361528 ST7Q9NRC1 585 aa13.84□□□□□ -0.19
CNOT4-203ENST00000361528 CCDC171Q6TFL3 1326 aa13.84□□□□□ -0.19
CNOT4-203ENST00000361528 WDR7Q9Y4E6 1490 aa13.84□□□□□ -0.19
CNOT4-203ENST00000361528 TRIM66O15016 1216 aa13.84□□□□□ -0.19
CNOT4-203ENST00000361528 CALRP27797 417 aaKnown RBP13.84□□□□□ -0.19
CNOT4-203ENST00000361528 GYS2P54840 703 aa13.84□□□□□ -0.19
CNOT4-203ENST00000361528 NAA30Q147X3 362 aaPredicted RBP13.84□□□□□ -0.19
CNOT4-203ENST00000361528 CEP135Q66GS9 1140 aa13.84□□□□□ -0.19
CNOT4-203ENST00000361528 EP400NLQ6ZTU2 488 aa13.84□□□□□ -0.19
CNOT4-203ENST00000361528 C16orf45Q96MC5 204 aaPredicted RBP13.84□□□□□ -0.19
CNOT4-203ENST00000361528 PSD3Q9NYI0 1048 aa13.84□□□□□ -0.19
CNOT4-203ENST00000361528 RRP15Q9Y3B9 282 aaKnown RBP13.84□□□□□ -0.19
CNOT4-203ENST00000361528 FHOD1Q9Y613 1164 aa13.84□□□□□ -0.19
CNOT4-203ENST00000361528 ATP10AO60312 1499 aa13.83□□□□□ -0.19
CNOT4-203ENST00000361528 ADGRL2O95490 1459 aa13.83□□□□□ -0.19
CNOT4-203ENST00000361528 CLTCL1P53675 1640 aa13.83□□□□□ -0.19
CNOT4-203ENST00000361528 MX1P20591 662 aa13.83□□□□□ -0.2
CNOT4-203ENST00000361528 TMEM87AQ8NBN3 555 aa13.83□□□□□ -0.2
CNOT4-203ENST00000361528 MAGI2Q86UL8 1455 aa13.83□□□□□ -0.2
CNOT4-203ENST00000361528 PTPRGP23470 1445 aa13.83□□□□□ -0.2
CNOT4-203ENST00000361528 TDO2P48775 406 aa13.83□□□□□ -0.2
CNOT4-203ENST00000361528 TNNQ9UQP3 1299 aa13.83□□□□□ -0.2
CNOT4-203ENST00000361528 HCLS1P14317 486 aaPredicted RBP13.82□□□□□ -0.2
CNOT4-203ENST00000361528 AK7Q96M32 723 aa13.82□□□□□ -0.2
CNOT4-203ENST00000361528 CEP89Q96ST8 783 aa13.82□□□□□ -0.2
CNOT4-203ENST00000361528 IFT57Q9NWB7 429 aa13.82□□□□□ -0.2
CNOT4-203ENST00000361528 URB2Q14146 1524 aaKnown RBP13.82□□□□□ -0.2
CNOT4-203ENST00000361528 EIF2AK4Q9P2K8 1649 aaKnown RBP13.82□□□□□ -0.2
CNOT4-203ENST00000361528 IVLP07476 585 aa13.82□□□□□ -0.2
CNOT4-203ENST00000361528 TICAM2Q86XR7 235 aa13.82□□□□□ -0.2
CNOT4-203ENST00000361528 NEK11Q8NG66 645 aa13.82□□□□□ -0.2
CNOT4-203ENST00000361528 DRC1Q96MC2 740 aa13.82□□□□□ -0.2
CNOT4-203ENST00000361528 ZNF215Q9UL58 517 aaPredicted RBP13.82□□□□□ -0.2
CNOT4-203ENST00000361528 SUFUQ9UMX1 484 aa13.82□□□□□ -0.2
CNOT4-203ENST00000361528 CCDC196A0A1B0GTZ2 297 aa13.81□□□□□ -0.2
CNOT4-203ENST00000361528 SLU7O95391 586 aaKnown RBP13.81□□□□□ -0.2
CNOT4-203ENST00000361528 ZNF853P0CG23 659 aa13.81□□□□□ -0.2
CNOT4-203ENST00000361528 MAP2K1Q02750 393 aaPredicted RBP13.81□□□□□ -0.2
CNOT4-203ENST00000361528 TSGA10IPQ3SY00 556 aa13.81□□□□□ -0.2
CNOT4-203ENST00000361528 ZGPATQ8N5A5 531 aaKnown RBP13.81□□□□□ -0.2
CNOT4-203ENST00000361528 PHF23Q9BUL5 403 aaPredicted RBP13.81□□□□□ -0.2
CNOT4-203ENST00000361528 ERCC6Q03468 1493 aa13.81□□□□□ -0.2
CNOT4-203ENST00000361528 KIF2AO00139 706 aaPredicted RBP13.8□□□□□ -0.2
CNOT4-203ENST00000361528 PNMA6AP0CW24 399 aaPredicted RBP13.8□□□□□ -0.2
CNOT4-203ENST00000361528 ATP6V1AP38606 617 aa13.8□□□□□ -0.2
CNOT4-203ENST00000361528 MCM2P49736 904 aa13.8□□□□□ -0.2
CNOT4-203ENST00000361528 MCTP2Q6DN12 878 aa13.8□□□□□ -0.2
CNOT4-203ENST00000361528 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.8□□□□□ -0.2
CNOT4-203ENST00000361528 PPM1EQ8WY54 764 aa13.8□□□□□ -0.2
CNOT4-203ENST00000361528 GCC1Q96CN9 775 aa13.8□□□□□ -0.2
CNOT4-203ENST00000361528 TOMM22Q9NS69 142 aa13.8□□□□□ -0.2
CNOT4-203ENST00000361528 KDM2AQ9Y2K7 1162 aa13.8□□□□□ -0.2
CNOT4-203ENST00000361528 TOPBP1Q92547 1522 aa13.8□□□□□ -0.2
CNOT4-203ENST00000361528 TULP1O00294 542 aaPredicted RBP13.8□□□□□ -0.2
CNOT4-203ENST00000361528 GOLIM4O00461 696 aa13.8□□□□□ -0.2
CNOT4-203ENST00000361528 PLA2G4AP47712 749 aa13.8□□□□□ -0.2
CNOT4-203ENST00000361528 ELF2Q15723 593 aa13.8□□□□□ -0.2
CNOT4-203ENST00000361528 TPD52L1Q16890 204 aaPredicted RBP13.8□□□□□ -0.2
CNOT4-203ENST00000361528 CCDC27Q2M243 656 aa13.8□□□□□ -0.2
CNOT4-203ENST00000361528 LCMT1Q9UIC8 334 aa13.8□□□□□ -0.2
CNOT4-203ENST00000361528 ELP1O95163 1332 aa13.8□□□□□ -0.2
CNOT4-203ENST00000361528 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.79□□□□□ -0.2
CNOT4-203ENST00000361528 FUCA2Q9BTY2 467 aa13.79□□□□□ -0.2
CNOT4-203ENST00000361528 UBXN6Q9BZV1 441 aa13.79□□□□□ -0.2
CNOT4-203ENST00000361528 LNPKQ9C0E8 428 aa13.79□□□□□ -0.2
CNOT4-203ENST00000361528 ARGLU1Q9NWB6 273 aaPredicted RBP13.79□□□□□ -0.2
CNOT4-203ENST00000361528 GTF3C6Q969F1 213 aa13.79□□□□□ -0.2
CNOT4-203ENST00000361528 NUP160Q12769 1436 aa13.78□□□□□ -0.2
CNOT4-203ENST00000361528 KIF3CO14782 793 aa13.78□□□□□ -0.2
CNOT4-203ENST00000361528 PPP1R12AO14974 1030 aaPredicted RBP13.78□□□□□ -0.2
CNOT4-203ENST00000361528 PTGS1P23219 599 aa13.78□□□□□ -0.2
CNOT4-203ENST00000361528 TMED8Q6PL24 325 aaPredicted RBP13.78□□□□□ -0.2
CNOT4-203ENST00000361528 RTF1Q92541 710 aaKnown RBP13.78□□□□□ -0.2
CNOT4-203ENST00000361528 EXOC4Q96A65 974 aa13.78□□□□□ -0.2
CNOT4-203ENST00000361528 TACO1Q9BSH4 297 aaKnown RBP13.78□□□□□ -0.2
CNOT4-203ENST00000361528 ZBTB40Q9NUA8 1239 aa13.78□□□□□ -0.2
CNOT4-203ENST00000361528 FBXO3Q9UK99 471 aa13.78□□□□□ -0.2
CNOT4-203ENST00000361528 NEMFO60524 1076 aa13.78□□□□□ -0.2
CNOT4-203ENST00000361528 CPP00450 1065 aa13.78□□□□□ -0.2
CNOT4-203ENST00000361528 PACS2Q86VP3 889 aa13.78□□□□□ -0.2
CNOT4-203ENST00000361528 INTS4Q96HW7 963 aaKnown RBP13.78□□□□□ -0.2
CNOT4-203ENST00000361528 USP26Q9BXU7 913 aa13.78□□□□□ -0.2
CNOT4-203ENST00000361528 IQSEC2Q5JU85 1478 aa13.77□□□□□ -0.21
CNOT4-203ENST00000361528 ZRANB2O95218 330 aaKnown RBP eCLIP13.77□□□□□ -0.217e-6■■■■■ 37.3
CNOT4-203ENST00000361528 C14orf37Q86TY3 774 aa13.77□□□□□ -0.21
CNOT4-203ENST00000361528 SPC24Q8NBT2 197 aa13.77□□□□□ -0.21
CNOT4-203ENST00000361528 CCDC189A1A4V9 331 aa13.76□□□□□ -0.21
CNOT4-203ENST00000361528 MAP2K2P36507 400 aa13.76□□□□□ -0.21
CNOT4-203ENST00000361528 SMARCE1Q969G3 411 aa13.76□□□□□ -0.21
CNOT4-203ENST00000361528 PLCD4Q9BRC7 762 aa13.76□□□□□ -0.21
CNOT4-203ENST00000361528 RAD54L2Q9Y4B4 1467 aa13.76□□□□□ -0.21
CNOT4-203ENST00000361528 DNMBPQ6XZF7 1577 aa13.76□□□□□ -0.21
CNOT4-203ENST00000361528 AP5Z1O43299 807 aa13.76□□□□□ -0.21
CNOT4-203ENST00000361528 ZSCAN25Q6NSZ9 544 aa13.76□□□□□ -0.21
CNOT4-203ENST00000361528 MMS22LQ6ZRQ5 1243 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms