RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 LTN1O94822 1766 aa10.29□□□□□ -0.76
CCL28-201ENST00000361115 ANP32AP39687 249 aaKnown RBP10.29□□□□□ -0.76
CCL28-201ENST00000361115 RGL3Q3MIN7 710 aa10.29□□□□□ -0.76
CCL28-201ENST00000361115 ZBTB47Q9UFB7 747 aaPredicted RBP10.29□□□□□ -0.76
CCL28-201ENST00000361115 POLD1P28340 1107 aa10.29□□□□□ -0.76
CCL28-201ENST00000361115 ABTB2Q8N961 1025 aa10.28□□□□□ -0.76
CCL28-201ENST00000361115 WASHC2AQ641Q2 1341 aa10.28□□□□□ -0.76
CCL28-201ENST00000361115 MINK1Q8N4C8 1332 aaPredicted RBP10.28□□□□□ -0.76
CCL28-201ENST00000361115 PDE4CQ08493 712 aa10.28□□□□□ -0.76
CCL28-201ENST00000361115 FAM9BQ8IZU0 186 aa10.28□□□□□ -0.76
CCL28-201ENST00000361115 ARHGEF25Q86VW2 580 aa10.27□□□□□ -0.76
CCL28-201ENST00000361115 ZNF784Q8NCA9 323 aaPredicted RBP10.27□□□□□ -0.77
CCL28-201ENST00000361115 TUBGCP6Q96RT7 1819 aa10.27□□□□□ -0.77
CCL28-201ENST00000361115 EDC4Q6P2E9 1401 aaKnown RBP10.27□□□□□ -0.77
CCL28-201ENST00000361115 LARP1Q6PKG0 1096 aaKnown RBP10.27□□□□□ -0.77
CCL28-201ENST00000361115 KIF13BQ9NQT8 1826 aa10.26□□□□□ -0.77
CCL28-201ENST00000361115 EXOC5O00471 708 aa10.26□□□□□ -0.77
CCL28-201ENST00000361115 TRAK1Q9UPV9 953 aa10.26□□□□□ -0.77
CCL28-201ENST00000361115 C5P01031 1676 aa10.26□□□□□ -0.77
CCL28-201ENST00000361115 TXNRD1Q16881 649 aa10.26□□□□□ -0.77
CCL28-201ENST00000361115 ADCY9O60503 1353 aa10.26□□□□□ -0.77
CCL28-201ENST00000361115 GIGYF1O75420 1035 aaPredicted RBP10.25□□□□□ -0.77
CCL28-201ENST00000361115 ZBED9Q6R2W3 1325 aa10.25□□□□□ -0.77
CCL28-201ENST00000361115 STRN4Q9NRL3 753 aa10.25□□□□□ -0.77
CCL28-201ENST00000361115 RGPD5Q99666 1765 aa10.25□□□□□ -0.77
CCL28-201ENST00000361115 CD2APQ9Y5K6 639 aa10.24□□□□□ -0.77
CCL28-201ENST00000361115 PKD1L3Q7Z443 1732 aa10.24□□□□□ -0.77
CCL28-201ENST00000361115 ANKRD36BQ8N2N9 1353 aa10.24□□□□□ -0.77
CCL28-201ENST00000361115 NUTM2FA1L443 756 aa10.24□□□□□ -0.77
CCL28-201ENST00000361115 HSPA5P11021 654 aaKnown RBP10.24□□□□□ -0.77
CCL28-201ENST00000361115 SYT17Q9BSW7 474 aa10.23□□□□□ -0.77
CCL28-201ENST00000361115 DOT1LQ8TEK3 1739 aa10.23□□□□□ -0.77
CCL28-201ENST00000361115 TOM1L2Q6ZVM7 507 aa10.23□□□□□ -0.77
CCL28-201ENST00000361115 AKT1S1Q96B36 256 aa10.22□□□□□ -0.77
CCL28-201ENST00000361115 LAS1LQ9Y4W2 734 aaKnown RBP10.22□□□□□ -0.77
CCL28-201ENST00000361115 MRS2Q9HD23 443 aa10.22□□□□□ -0.77
CCL28-201ENST00000361115 TTC21BQ7Z4L5 1316 aa10.22□□□□□ -0.77
CCL28-201ENST00000361115 ANKRD26Q9UPS8 1709 aa10.22□□□□□ -0.77
CCL28-201ENST00000361115 DCAF11Q8TEB1 546 aa10.22□□□□□ -0.77
CCL28-201ENST00000361115 TAF1LQ8IZX4 1826 aa10.21□□□□□ -0.77
CCL28-201ENST00000361115 PIAS4Q8N2W9 510 aaPredicted RBP10.21□□□□□ -0.77
CCL28-201ENST00000361115 PRKRIP1Q9H875 184 aaPredicted RBP10.21□□□□□ -0.77
CCL28-201ENST00000361115 IL2RBP14784 551 aa10.21□□□□□ -0.78
CCL28-201ENST00000361115 NEFMP07197 916 aa10.2□□□□□ -0.78
CCL28-201ENST00000361115 HOMEZQ8IX15 550 aa10.2□□□□□ -0.78
CCL28-201ENST00000361115 MARCH10Q8NA82 808 aaPredicted RBP10.2□□□□□ -0.78
CCL28-201ENST00000361115 TNRC6CQ9HCJ0 1690 aaKnown RBP10.2□□□□□ -0.78
CCL28-201ENST00000361115 ZC3H6P61129 1189 aaKnown RBP10.2□□□□□ -0.78
CCL28-201ENST00000361115 NPM2Q86SE8 214 aaKnown RBP10.2□□□□□ -0.78
CCL28-201ENST00000361115 NCAPD2Q15021 1401 aa10.2□□□□□ -0.78
CCL28-201ENST00000361115 SMG6Q86US8 1419 aaKnown RBP10.19□□□□□ -0.78
CCL28-201ENST00000361115 ERBB3P21860 1342 aa10.19□□□□□ -0.78
CCL28-201ENST00000361115 ZC3H4Q9UPT8 1303 aaKnown RBP10.19□□□□□ -0.78
CCL28-201ENST00000361115 SENP3-EIF4A1A0A087X0R7 540 aa10.19□□□□□ -0.78
CCL28-201ENST00000361115 NLRP6P59044 892 aa10.19□□□□□ -0.78
CCL28-201ENST00000361115 CHRNA2Q15822 529 aa10.19□□□□□ -0.78
CCL28-201ENST00000361115 BRPF3Q9ULD4 1205 aa10.19□□□□□ -0.78
CCL28-201ENST00000361115 FHDC1Q9C0D6 1143 aaPredicted RBP10.18□□□□□ -0.78
CCL28-201ENST00000361115 SRPK2P78362 688 aaKnown RBP10.18□□□□□ -0.78
CCL28-201ENST00000361115 KTN1Q86UP2 1357 aaKnown RBP10.17□□□□□ -0.78
CCL28-201ENST00000361115 MAP3K19Q56UN5 1328 aa10.17□□□□□ -0.78
CCL28-201ENST00000361115 SMARCC1Q92922 1105 aaPredicted RBP10.17□□□□□ -0.78
CCL28-201ENST00000361115 RNF123Q5XPI4 1314 aa10.17□□□□□ -0.78
CCL28-201ENST00000361115 ARFGEF1Q9Y6D6 1849 aa10.17□□□□□ -0.78
CCL28-201ENST00000361115 KIF20BQ96Q89 1820 aa10.16□□□□□ -0.78
CCL28-201ENST00000361115 PROM2Q8N271 834 aa10.16□□□□□ -0.78
CCL28-201ENST00000361115 APLP1P51693 650 aa10.16□□□□□ -0.78
CCL28-201ENST00000361115 HDGFL2Q7Z4V5 671 aaPredicted RBP10.16□□□□□ -0.78
CCL28-201ENST00000361115 CFAP44Q96MT7 982 aa10.16□□□□□ -0.78
CCL28-201ENST00000361115 C4BP0C0L5 1744 aa10.15□□□□□ -0.78
CCL28-201ENST00000361115 TERF2IPQ9NYB0 399 aa10.15□□□□□ -0.79
CCL28-201ENST00000361115 USP35Q9P2H5 1018 aa10.15□□□□□ -0.79
CCL28-201ENST00000361115 PXDNLA1KZ92 1463 aa10.15□□□□□ -0.79
CCL28-201ENST00000361115 WDR90Q96KV7 1748 aa10.14□□□□□ -0.79
CCL28-201ENST00000361115 HSPA6P17066 643 aa10.14□□□□□ -0.79
CCL28-201ENST00000361115 EIF4G2P78344 907 aaKnown RBP eCLIP10.14□□□□□ -0.79
CCL28-201ENST00000361115 SAFB2Q14151 953 aaKnown RBP eCLIP10.14□□□□□ -0.79
CCL28-201ENST00000361115 NUDCQ9Y266 331 aa10.14□□□□□ -0.79
CCL28-201ENST00000361115 UBR3Q6ZT12 1888 aa10.14□□□□□ -0.79
CCL28-201ENST00000361115 CD163L1Q9NR16 1453 aa10.14□□□□□ -0.79
CCL28-201ENST00000361115 IP6K1Q92551 441 aa10.14□□□□□ -0.79
CCL28-201ENST00000361115 KIAA1551Q9HCM1 1747 aa10.14□□□□□ -0.79
CCL28-201ENST00000361115 ATP10DQ9P241 1426 aa10.13□□□□□ -0.79
CCL28-201ENST00000361115 CSB-PGBD3P0DP91 1061 aa10.13□□□□□ -0.79
CCL28-201ENST00000361115 GPR162Q16538 588 aa10.13□□□□□ -0.79
CCL28-201ENST00000361115 PNPLA7Q6ZV29 1317 aa10.13□□□□□ -0.79
CCL28-201ENST00000361115 FSTL1Q12841 308 aa10.12□□□□□ -0.79
CCL28-201ENST00000361115 VSIG10Q8N0Z9 540 aa10.11□□□□□ -0.79
CCL28-201ENST00000361115 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.11□□□□□ -0.79
CCL28-201ENST00000361115 PDE4AP27815 886 aa10.11□□□□□ -0.79
CCL28-201ENST00000361115 CABP1Q9NZU7 370 aa10.11□□□□□ -0.79
CCL28-201ENST00000361115 SSFA2P28290 1259 aa10.1□□□□□ -0.79
CCL28-201ENST00000361115 PAXIP1Q6ZW49 1069 aaPredicted RBP10.1□□□□□ -0.79
CCL28-201ENST00000361115 PCDH11XQ9BZA7 1347 aa10.1□□□□□ -0.79
CCL28-201ENST00000361115 PCDH11YQ9BZA8 1340 aa10.1□□□□□ -0.79
CCL28-201ENST00000361115 USP47Q96K76 1375 aa10.1□□□□□ -0.79
CCL28-201ENST00000361115 MAP2P11137 1827 aaKnown RBP10.1□□□□□ -0.79
CCL28-201ENST00000361115 PPM1GO15355 546 aaPredicted RBP10.1□□□□□ -0.79
CCL28-201ENST00000361115 ZBTB7AO95365 584 aa10.1□□□□□ -0.79
CCL28-201ENST00000361115 RBM46Q8TBY0 533 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms