RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 NUCB2P80303 420 aa5.62□□□□□ -1.51
PTPN22-201ENST00000359785 PDCL2Q8N4E4 241 aa5.62□□□□□ -1.51
PTPN22-201ENST00000359785 MYH16Q9H6N6 1097 aa5.62□□□□□ -1.51
PTPN22-201ENST00000359785 PANK3Q9H999 370 aa5.62□□□□□ -1.51
PTPN22-201ENST00000359785 NPM1P06748 294 aaKnown RBP eCLIP5.62□□□□□ -1.51
PTPN22-201ENST00000359785 FUCA2Q9BTY2 467 aa5.62□□□□□ -1.51
PTPN22-201ENST00000359785 CCDC39Q9UFE4 941 aa5.62□□□□□ -1.51
PTPN22-201ENST00000359785 DDX19BQ9UMR2 479 aa5.62□□□□□ -1.51
PTPN22-201ENST00000359785 LRP5O75197 1615 aa5.62□□□□□ -1.51
PTPN22-201ENST00000359785 SEC24BO95487 1268 aa5.62□□□□□ -1.51
PTPN22-201ENST00000359785 CDC25BP30305 580 aa5.62□□□□□ -1.51
PTPN22-201ENST00000359785 MCM2P49736 904 aa5.62□□□□□ -1.51
PTPN22-201ENST00000359785 PIBF1Q8WXW3 757 aa5.62□□□□□ -1.51
PTPN22-201ENST00000359785 ALDH8A1Q9H2A2 487 aaPredicted RBP5.62□□□□□ -1.51
PTPN22-201ENST00000359785 LMBRD1Q9NUN5 540 aa5.62□□□□□ -1.51
PTPN22-201ENST00000359785 LAS1LQ9Y4W2 734 aaKnown RBP5.62□□□□□ -1.51
PTPN22-201ENST00000359785 USP42Q9H9J4 1324 aaKnown RBP5.62□□□□□ -1.51
PTPN22-201ENST00000359785 FER1L4A9Z1Z3 1794 aa5.61□□□□□ -1.51
PTPN22-201ENST00000359785 CEMIPQ8WUJ3 1361 aa5.61□□□□□ -1.51
PTPN22-201ENST00000359785 TUBB4AP04350 444 aa5.61□□□□□ -1.51
PTPN22-201ENST00000359785 LRSAM1Q6UWE0 723 aa5.61□□□□□ -1.51
PTPN22-201ENST00000359785 C22orf23Q9BZE7 217 aa5.61□□□□□ -1.51
PTPN22-201ENST00000359785 UBXN6Q9BZV1 441 aa5.61□□□□□ -1.51
PTPN22-201ENST00000359785 ATAD5Q96QE3 1844 aa5.61□□□□□ -1.51
PTPN22-201ENST00000359785 MBD3O95983 291 aa5.61□□□□□ -1.51
PTPN22-201ENST00000359785 TSPY4P0CV99 314 aa5.61□□□□□ -1.51
PTPN22-201ENST00000359785 TSPY10P0CW01 314 aa5.61□□□□□ -1.51
PTPN22-201ENST00000359785 FGD1P98174 961 aa5.61□□□□□ -1.51
PTPN22-201ENST00000359785 RABEP1Q15276 862 aa5.61□□□□□ -1.51
PTPN22-201ENST00000359785 TNPO1Q92973 898 aaKnown RBP5.61□□□□□ -1.51
PTPN22-201ENST00000359785 SIRT1Q96EB6 747 aa5.61□□□□□ -1.51
PTPN22-201ENST00000359785 UPF2Q9HAU5 1272 aaKnown RBP5.61□□□□□ -1.51
PTPN22-201ENST00000359785 PKD1L3Q7Z443 1732 aa5.61□□□□□ -1.51
PTPN22-201ENST00000359785 RFX7Q2KHR2 1363 aa5.61□□□□□ -1.51
PTPN22-201ENST00000359785 K7ELQ4 463 aaPredicted RBP5.61□□□□□ -1.51
PTPN22-201ENST00000359785 GAS2L3Q86XJ1 694 aa5.61□□□□□ -1.51
PTPN22-201ENST00000359785 KIF13BQ9NQT8 1826 aa5.61□□□□□ -1.51
PTPN22-201ENST00000359785 PTPRUQ92729 1446 aa5.61□□□□□ -1.51
PTPN22-201ENST00000359785 TCHHQ07283 1943 aa5.6□□□□□ -1.51
PTPN22-201ENST00000359785 NFAT5O94916 1531 aa5.6□□□□□ -1.51
PTPN22-201ENST00000359785 TSPYL1Q9H0U9 437 aa5.6□□□□□ -1.51
PTPN22-201ENST00000359785 PCDHB15Q9Y5E8 787 aa5.6□□□□□ -1.51
PTPN22-201ENST00000359785 P3H3Q8IVL6 736 aa5.6□□□□□ -1.51
PTPN22-201ENST00000359785 SPINK5Q9NQ38 1064 aaPredicted RBP5.6□□□□□ -1.51
PTPN22-201ENST00000359785 PDZRN3Q9UPQ7 1066 aa5.6□□□□□ -1.51
PTPN22-201ENST00000359785 FBLN2P98095 1184 aa5.6□□□□□ -1.51
PTPN22-201ENST00000359785 C14orf93Q9H972 538 aaKnown RBP5.6□□□□□ -1.51
PTPN22-201ENST00000359785 MYH7P12883 1935 aa5.6□□□□□ -1.51
PTPN22-201ENST00000359785 DOCK2Q92608 1830 aa5.59□□□□□ -1.51
PTPN22-201ENST00000359785 EDC4Q6P2E9 1401 aaKnown RBP5.59□□□□□ -1.51
PTPN22-201ENST00000359785 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.59□□□□□ -1.51
PTPN22-201ENST00000359785 IQUBQ8NA54 791 aa5.59□□□□□ -1.51
PTPN22-201ENST00000359785 MORC2Q9Y6X9 1032 aaPredicted RBP5.59□□□□□ -1.51
PTPN22-201ENST00000359785 COL15A1P39059 1388 aa5.59□□□□□ -1.51
PTPN22-201ENST00000359785 KIF3AQ9Y496 699 aa5.59□□□□□ -1.52
PTPN22-201ENST00000359785 OVOS2A0A0J9YW53 1432 aa5.58□□□□□ -1.52
PTPN22-201ENST00000359785 OVOS2Q6IE36 1432 aa5.58□□□□□ -1.52
PTPN22-201ENST00000359785 LAMB2P55268 1798 aa5.58□□□□□ -1.52
PTPN22-201ENST00000359785 SCN11AQ9UI33 1791 aa5.58□□□□□ -1.52
PTPN22-201ENST00000359785 MMP14P50281 582 aa5.58□□□□□ -1.52
PTPN22-201ENST00000359785 DHX8Q14562 1220 aaKnown RBP5.58□□□□□ -1.52
PTPN22-201ENST00000359785 KIAA1211Q6ZU35 1233 aa5.58□□□□□ -1.52
PTPN22-201ENST00000359785 ZNF710Q8N1W2 664 aa5.58□□□□□ -1.52
PTPN22-201ENST00000359785 CARD14Q9BXL6 1004 aa5.58□□□□□ -1.52
PTPN22-201ENST00000359785 SPAG9O60271 1321 aaKnown RBP5.58□□□□□ -1.52
PTPN22-201ENST00000359785 TTC21BQ7Z4L5 1316 aa5.58□□□□□ -1.52
PTPN22-201ENST00000359785 ATP8B1O43520 1251 aa5.58□□□□□ -1.52
PTPN22-201ENST00000359785 BAG4O95429 457 aaKnown RBP5.58□□□□□ -1.52
PTPN22-201ENST00000359785 MUM1L1Q5H9M0 696 aa5.58□□□□□ -1.52
PTPN22-201ENST00000359785 LTN1O94822 1766 aa5.58□□□□□ -1.52
PTPN22-201ENST00000359785 BRD1O95696 1058 aa5.58□□□□□ -1.52
PTPN22-201ENST00000359785 ELP1O95163 1332 aa5.58□□□□□ -1.52
PTPN22-201ENST00000359785 USP31Q70CQ4 1352 aa5.58□□□□□ -1.52
PTPN22-201ENST00000359785 TRPM3Q9HCF6 1732 aaPredicted RBP5.57□□□□□ -1.52
PTPN22-201ENST00000359785 MYO5AQ9Y4I1 1855 aaKnown RBP5.57□□□□□ -1.52
PTPN22-201ENST00000359785 ARID3AQ99856 593 aa5.57□□□□□ -1.52
PTPN22-201ENST00000359785 UTP14AQ9BVJ6 771 aaKnown RBP5.57□□□□□ -1.52
PTPN22-201ENST00000359785 PANK2Q9BZ23 570 aa5.57□□□□□ -1.52
PTPN22-201ENST00000359785 BCL9LQ86UU0 1499 aa5.57□□□□□ -1.52
PTPN22-201ENST00000359785 MSH6P52701 1360 aa5.57□□□□□ -1.52
PTPN22-201ENST00000359785 GIGYF1O75420 1035 aaPredicted RBP5.57□□□□□ -1.52
PTPN22-201ENST00000359785 RPS6KA5O75582 802 aa5.57□□□□□ -1.52
PTPN22-201ENST00000359785 CAVIN2O95810 425 aa5.57□□□□□ -1.52
PTPN22-201ENST00000359785 SF3B2Q13435 895 aaKnown RBP5.57□□□□□ -1.52
PTPN22-201ENST00000359785 ZKSCAN2Q63HK3 967 aa5.57□□□□□ -1.52
PTPN22-201ENST00000359785 HSCBQ8IWL3 235 aa5.57□□□□□ -1.52
PTPN22-201ENST00000359785 NHSL1Q5SYE7 1610 aa5.57□□□□□ -1.52
PTPN22-201ENST00000359785 ARHGAP23Q9P227 1491 aa5.57□□□□□ -1.52
PTPN22-201ENST00000359785 NASPP49321 788 aaPredicted RBP5.56□□□□□ -1.52
PTPN22-201ENST00000359785 CAVIN1Q6NZI2 390 aaKnown RBP5.56□□□□□ -1.52
PTPN22-201ENST00000359785 A0A1B0GUL6 1792 aa5.56□□□□□ -1.52
PTPN22-201ENST00000359785 TNRC6CQ9HCJ0 1690 aaKnown RBP5.56□□□□□ -1.52
PTPN22-201ENST00000359785 NBPF1Q3BBV0 1214 aa5.56□□□□□ -1.52
PTPN22-201ENST00000359785 ZSCAN23Q3MJ62 389 aa5.56□□□□□ -1.52
PTPN22-201ENST00000359785 ZNF326Q5BKZ1 582 aaKnown RBP5.56□□□□□ -1.52
PTPN22-201ENST00000359785 INTS3Q68E01 1043 aaKnown RBP5.56□□□□□ -1.52
PTPN22-201ENST00000359785 IPO4Q8TEX9 1081 aaKnown RBP5.56□□□□□ -1.52
PTPN22-201ENST00000359785 SLX4Q8IY92 1834 aa5.56□□□□□ -1.52
PTPN22-201ENST00000359785 ANKARQ7Z5J8 1434 aa5.56□□□□□ -1.52
PTPN22-201ENST00000359785 TOGARAM1Q9Y4F4 1720 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms