RNA–Protein interactions for RNA: ENST00000359726.7

APP-206, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 3,294 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-206ENST00000359726 RIOK3O14730 519 aaKnown RBP9.19□□□□□ -0.94
APP-206ENST00000359726 MTHFSP49914 203 aa9.19□□□□□ -0.94
APP-206ENST00000359726 GABPB1Q06547 395 aaPredicted RBP9.19□□□□□ -0.94
APP-206ENST00000359726 OGFRQ9NZT2 677 aa9.19□□□□□ -0.94
APP-206ENST00000359726 MORC2Q9Y6X9 1032 aaPredicted RBP9.19□□□□□ -0.94
APP-206ENST00000359726 PNPLA6Q8IY17 1366 aa9.19□□□□□ -0.94
APP-206ENST00000359726 CD163L1Q9NR16 1453 aa9.19□□□□□ -0.94
APP-206ENST00000359726 SPDYE4A6NLX3 237 aa9.18□□□□□ -0.94
APP-206ENST00000359726 TTC22Q5TAA0 569 aa9.18□□□□□ -0.94
APP-206ENST00000359726 KIF24Q5T7B8 1368 aa9.18□□□□□ -0.94
APP-206ENST00000359726 TMPOP42166 694 aaKnown RBP9.18□□□□□ -0.94
APP-206ENST00000359726 PDCL2Q8N4E4 241 aa9.18□□□□□ -0.94
APP-206ENST00000359726 CHMP4BQ9H444 224 aaKnown RBP9.18□□□□□ -0.94
APP-206ENST00000359726 DDX41Q9UJV9 622 aaKnown RBP9.18□□□□□ -0.94
APP-206ENST00000359726 PDIA4P13667 645 aaKnown RBP9.18□□□□□ -0.94
APP-206ENST00000359726 ARHGAP45Q92619 1136 aa9.18□□□□□ -0.94
APP-206ENST00000359726 TTC12Q9H892 705 aaPredicted RBP9.18□□□□□ -0.94
APP-206ENST00000359726 LMTK2Q8IWU2 1503 aa9.17□□□□□ -0.94
APP-206ENST00000359726 FAM135BQ49AJ0 1406 aa9.17□□□□□ -0.94
APP-206ENST00000359726 ADGRF5Q8IZF2 1346 aa9.17□□□□□ -0.94
APP-206ENST00000359726 PYCARDQ9ULZ3 195 aa9.17□□□□□ -0.94
APP-206ENST00000359726 CHD2O14647 1828 aaKnown RBP9.17□□□□□ -0.94
APP-206ENST00000359726 RNF214Q8ND24 703 aa9.16□□□□□ -0.94
APP-206ENST00000359726 ARAP3Q8WWN8 1544 aa9.16□□□□□ -0.94
APP-206ENST00000359726 GADD45BO75293 160 aaPredicted RBP9.16□□□□□ -0.94
APP-206ENST00000359726 ANKRD45Q5TZF3 282 aa9.16□□□□□ -0.94
APP-206ENST00000359726 MRPL50Q8N5N7 158 aaKnown RBP9.16□□□□□ -0.94
APP-206ENST00000359726 FAM184AQ8NB25 1140 aa9.16□□□□□ -0.94
APP-206ENST00000359726 ERBB3P21860 1342 aa9.16□□□□□ -0.94
APP-206ENST00000359726 ASXL2Q76L83 1435 aa9.16□□□□□ -0.94
APP-206ENST00000359726 CAPN2P17655 700 aa9.16□□□□□ -0.94
APP-206ENST00000359726 CFAP70Q5T0N1 1121 aa9.16□□□□□ -0.94
APP-206ENST00000359726 MORC1Q86VD1 984 aa9.16□□□□□ -0.94
APP-206ENST00000359726 CHD1O14646 1710 aa9.16□□□□□ -0.94
APP-206ENST00000359726 DCTPP1Q9H773 170 aa9.15□□□□□ -0.94
APP-206ENST00000359726 ADCY5O95622 1261 aa9.15□□□□□ -0.94
APP-206ENST00000359726 TNNT2P45379 298 aaPredicted RBP9.15□□□□□ -0.94
APP-206ENST00000359726 PUS7Q96PZ0 661 aaKnown RBP9.15□□□□□ -0.94
APP-206ENST00000359726 TERF2Q15554 542 aa9.14□□□□□ -0.95
APP-206ENST00000359726 IGSF3O75054 1194 aa9.14□□□□□ -0.95
APP-206ENST00000359726 KDM4AO75164 1064 aa9.14□□□□□ -0.95
APP-206ENST00000359726 ZNF428Q96B54 188 aa9.14□□□□□ -0.95
APP-206ENST00000359726 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.14□□□□□ -0.952e-7■■□□□ 12.4
APP-206ENST00000359726 AATKQ6ZMQ8 1374 aa9.14□□□□□ -0.95
APP-206ENST00000359726 CDK12Q9NYV4 1490 aaPredicted RBP9.14□□□□□ -0.95
APP-206ENST00000359726 HECW2Q9P2P5 1572 aa9.14□□□□□ -0.95
APP-206ENST00000359726 SMARCA5O60264 1052 aaPredicted RBP9.14□□□□□ -0.95
APP-206ENST00000359726 INTS4Q96HW7 963 aaKnown RBP9.14□□□□□ -0.95
APP-206ENST00000359726 SLC12A5Q9H2X9 1139 aa9.14□□□□□ -0.95
APP-206ENST00000359726 USP25Q9UHP3 1055 aa9.14□□□□□ -0.95
APP-206ENST00000359726 MAP2P11137 1827 aaKnown RBP9.14□□□□□ -0.95
APP-206ENST00000359726 MYH15Q9Y2K3 1946 aa9.14□□□□□ -0.95
APP-206ENST00000359726 KIF18AQ8NI77 898 aa9.13□□□□□ -0.95
APP-206ENST00000359726 JPH4Q96JJ6 628 aa9.13□□□□□ -0.95
APP-206ENST00000359726 SIGLEC1Q9BZZ2 1709 aa9.13□□□□□ -0.95
APP-206ENST00000359726 SALL3Q9BXA9 1300 aa9.13□□□□□ -0.95
APP-206ENST00000359726 TMX3Q96JJ7 454 aa9.13□□□□□ -0.95
APP-206ENST00000359726 C1orf115Q9H7X2 142 aa9.13□□□□□ -0.95
APP-206ENST00000359726 IPO8O15397 1037 aaKnown RBP9.13□□□□□ -0.95
APP-206ENST00000359726 VAMP4O75379 141 aa9.13□□□□□ -0.95
APP-206ENST00000359726 CGNQ9P2M7 1197 aaKnown RBP9.13□□□□□ -0.95
APP-206ENST00000359726 ITSN1Q15811 1721 aa9.12□□□□□ -0.95
APP-206ENST00000359726 VGLL3A8MV65 326 aa9.12□□□□□ -0.95
APP-206ENST00000359726 ZNF853P0CG23 659 aa9.12□□□□□ -0.95
APP-206ENST00000359726 SDSP20132 328 aa9.12□□□□□ -0.95
APP-206ENST00000359726 C16orf71Q8IYS4 520 aaPredicted RBP9.12□□□□□ -0.95
APP-206ENST00000359726 OTUD7AQ8TE49 926 aaPredicted RBP9.12□□□□□ -0.95
APP-206ENST00000359726 XRN1Q8IZH2 1706 aaKnown RBP9.12□□□□□ -0.95
APP-206ENST00000359726 KIAA0232Q92628 1395 aa9.12□□□□□ -0.95
APP-206ENST00000359726 USP48Q86UV5 1035 aa9.11□□□□□ -0.95
APP-206ENST00000359726 CFAP44Q96MT7 982 aa9.11□□□□□ -0.95
APP-206ENST00000359726 OSBPL3Q9H4L5 887 aa9.11□□□□□ -0.95
APP-206ENST00000359726 NEXMIFQ5QGS0 1516 aa9.11□□□□□ -0.95
APP-206ENST00000359726 ST18O60284 1047 aa9.11□□□□□ -0.95
APP-206ENST00000359726 FAM193AP78312 1265 aa9.11□□□□□ -0.95
APP-206ENST00000359726 INTS3Q68E01 1043 aaKnown RBP9.11□□□□□ -0.95
APP-206ENST00000359726 DIAPH3Q9NSV4 1193 aa9.11□□□□□ -0.95
APP-206ENST00000359726 ATP7AQ04656 1500 aa9.1□□□□□ -0.95
APP-206ENST00000359726 MX1P20591 662 aa9.1□□□□□ -0.95
APP-206ENST00000359726 CCDC183Q5T5S1 534 aa9.1□□□□□ -0.95
APP-206ENST00000359726 NFATC2IPQ8NCF5 419 aa9.1□□□□□ -0.95
APP-206ENST00000359726 ATAD2Q6PL18 1390 aa9.1□□□□□ -0.95
APP-206ENST00000359726 ABCC3O15438 1527 aa9.1□□□□□ -0.95
APP-206ENST00000359726 CHRM1P11229 460 aaPredicted RBP9.1□□□□□ -0.95
APP-206ENST00000359726 TAF7LQ5H9L4 462 aa9.1□□□□□ -0.95
APP-206ENST00000359726 MPNDQ8N594 471 aa9.1□□□□□ -0.95
APP-206ENST00000359726 SPAG9O60271 1321 aaKnown RBP9.1□□□□□ -0.95
APP-206ENST00000359726 KIF1BPQ96EK5 621 aa9.09□□□□□ -0.95
APP-206ENST00000359726 KIDINS220Q9ULH0 1771 aa9.09□□□□□ -0.95
APP-206ENST00000359726 SMTNL1A8MU46 457 aa9.09□□□□□ -0.95
APP-206ENST00000359726 U2AF1L5P0DN76 240 aaPredicted RBP9.09□□□□□ -0.95
APP-206ENST00000359726 HCLS1P14317 486 aaPredicted RBP9.09□□□□□ -0.95
APP-206ENST00000359726 RBM6P78332 1123 aaKnown RBP9.09□□□□□ -0.95
APP-206ENST00000359726 U2AF1Q01081 240 aaKnown RBP eCLIP9.09□□□□□ -0.95
APP-206ENST00000359726 NAA30Q147X3 362 aaPredicted RBP9.09□□□□□ -0.95
APP-206ENST00000359726 CFAP53Q96M91 514 aa9.09□□□□□ -0.95
APP-206ENST00000359726 NRKQ7Z2Y5 1582 aa9.09□□□□□ -0.95
APP-206ENST00000359726 PHF14O94880 888 aa9.09□□□□□ -0.95
APP-206ENST00000359726 A0A1W2PP64 1363 aa9.09□□□□□ -0.95
APP-206ENST00000359726 SSH2Q76I76 1423 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 313.1 ms