RNA–Protein interactions for RNA: ENST00000354955.4

FMOD-201, Transcript of fibromodulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FMOD, Length 3,310 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMOD-201ENST00000354955 LMOD2Q6P5Q4 547 aa10.46□□□□□ -0.73
FMOD-201ENST00000354955 COG3Q96JB2 828 aa10.46□□□□□ -0.73
FMOD-201ENST00000354955 C16orf45Q96MC5 204 aaPredicted RBP10.46□□□□□ -0.73
FMOD-201ENST00000354955 CCDC39Q9UFE4 941 aa10.46□□□□□ -0.73
FMOD-201ENST00000354955 NOL7Q9UMY1 257 aaKnown RBP10.46□□□□□ -0.73
FMOD-201ENST00000354955 FCHSD2O94868 740 aa10.46□□□□□ -0.74
FMOD-201ENST00000354955 DDIT3P35638 169 aa10.46□□□□□ -0.74
FMOD-201ENST00000354955 USHBP1Q8N6Y0 703 aa10.46□□□□□ -0.74
FMOD-201ENST00000354955 PHF23Q9BUL5 403 aaPredicted RBP10.46□□□□□ -0.74
FMOD-201ENST00000354955 E9PCH4 1651 aa10.46□□□□□ -0.74
FMOD-201ENST00000354955 PNMA6EA0A0J9YXQ4 647 aa10.45□□□□□ -0.74
FMOD-201ENST00000354955 GOLGA6L4A6NEF3 574 aa10.45□□□□□ -0.74
FMOD-201ENST00000354955 CEP85Q6P2H3 762 aa10.45□□□□□ -0.74
FMOD-201ENST00000354955 IFT57Q9NWB7 429 aa10.45□□□□□ -0.74
FMOD-201ENST00000354955 MCCP23508 829 aa10.45□□□□□ -0.74
FMOD-201ENST00000354955 U2AF2P26368 475 aaKnown RBP eCLIP10.45□□□□□ -0.74
FMOD-201ENST00000354955 PPP1R9BQ96SB3 815 aa10.45□□□□□ -0.74
FMOD-201ENST00000354955 IL25Q9H293 177 aa10.45□□□□□ -0.74
FMOD-201ENST00000354955 ATP10AO60312 1499 aa10.45□□□□□ -0.74
FMOD-201ENST00000354955 ERCC4Q92889 916 aaPredicted RBP10.45□□□□□ -0.74
FMOD-201ENST00000354955 PDE1AP54750 535 aa10.44□□□□□ -0.74
FMOD-201ENST00000354955 STK11IPQ8N1F8 1099 aa10.44□□□□□ -0.74
FMOD-201ENST00000354955 DCTPP1Q9H773 170 aa10.44□□□□□ -0.74
FMOD-201ENST00000354955 LRRFIP2Q9Y608 721 aaKnown RBP10.44□□□□□ -0.74
FMOD-201ENST00000354955 DNM1Q05193 864 aaKnown RBP10.43□□□□□ -0.74
FMOD-201ENST00000354955 NOLC1Q14978 699 aaKnown RBP eCLIP10.43□□□□□ -0.74
FMOD-201ENST00000354955 ZNF771Q7L3S4 317 aaPredicted RBP10.43□□□□□ -0.74
FMOD-201ENST00000354955 STK31Q9BXU1 1019 aa10.43□□□□□ -0.74
FMOD-201ENST00000354955 ERICH4A6NGS2 130 aa10.43□□□□□ -0.74
FMOD-201ENST00000354955 ZBTB22O15209 634 aa10.43□□□□□ -0.74
FMOD-201ENST00000354955 SIL1Q9H173 461 aa10.43□□□□□ -0.74
FMOD-201ENST00000354955 PDIA4P13667 645 aaKnown RBP10.43□□□□□ -0.74
FMOD-201ENST00000354955 ALDH1L2Q3SY69 923 aa10.43□□□□□ -0.74
FMOD-201ENST00000354955 DDX11Q96FC9 970 aa10.43□□□□□ -0.74
FMOD-201ENST00000354955 SMC3Q9UQE7 1217 aa10.43□□□□□ -0.74
FMOD-201ENST00000354955 MSH6P52701 1360 aa10.43□□□□□ -0.74
FMOD-201ENST00000354955 CASTP20810 708 aaKnown RBP10.42□□□□□ -0.74
FMOD-201ENST00000354955 FMNL2Q96PY5 1086 aa10.42□□□□□ -0.74
FMOD-201ENST00000354955 SHANK2Q9UPX8 1470 aa10.42□□□□□ -0.74
FMOD-201ENST00000354955 HMMRO75330 724 aa10.42□□□□□ -0.74
FMOD-201ENST00000354955 PTMSP20962 102 aa10.42□□□□□ -0.74
FMOD-201ENST00000354955 LRMPQ12912 555 aa10.42□□□□□ -0.74
FMOD-201ENST00000354955 SASS6Q6UVJ0 657 aa10.42□□□□□ -0.74
FMOD-201ENST00000354955 TRMT1Q9NXH9 659 aaKnown RBP10.42□□□□□ -0.74
FMOD-201ENST00000354955 NDUFB9Q9Y6M9 179 aa10.42□□□□□ -0.74
FMOD-201ENST00000354955 VGLL3A8MV65 326 aa10.41□□□□□ -0.74
FMOD-201ENST00000354955 MX1P20591 662 aa10.41□□□□□ -0.74
FMOD-201ENST00000354955 AIMP1Q12904 312 aaKnown RBP10.41□□□□□ -0.74
FMOD-201ENST00000354955 CHAF1AQ13111 956 aaPredicted RBP10.41□□□□□ -0.74
FMOD-201ENST00000354955 SYAP1Q96A49 352 aaPredicted RBP10.41□□□□□ -0.74
FMOD-201ENST00000354955 CFAP44Q96MT7 982 aa10.41□□□□□ -0.74
FMOD-201ENST00000354955 SRCIN1Q9C0H9 1055 aa10.41□□□□□ -0.74
FMOD-201ENST00000354955 CHMP4BQ9H444 224 aaKnown RBP10.41□□□□□ -0.74
FMOD-201ENST00000354955 TTC37Q6PGP7 1564 aa10.41□□□□□ -0.74
FMOD-201ENST00000354955 ZNF445P59923 1031 aa10.41□□□□□ -0.74
FMOD-201ENST00000354955 LUZP1Q86V48 1076 aa10.41□□□□□ -0.74
FMOD-201ENST00000354955 LRRCC1Q9C099 1032 aa10.41□□□□□ -0.74
FMOD-201ENST00000354955 ISY1Q9ULR0 285 aaKnown RBP10.41□□□□□ -0.74
FMOD-201ENST00000354955 ABCC2Q92887 1545 aa10.41□□□□□ -0.74
FMOD-201ENST00000354955 NUP160Q12769 1436 aa10.41□□□□□ -0.74
FMOD-201ENST00000354955 ZNF518AQ6AHZ1 1483 aa10.4□□□□□ -0.74
FMOD-201ENST00000354955 ATP2B3Q16720 1220 aa10.4□□□□□ -0.74
FMOD-201ENST00000354955 PRPF40BQ6NWY9 871 aaKnown RBP10.4□□□□□ -0.74
FMOD-201ENST00000354955 ZFP91Q96JP5 570 aaPredicted RBP10.4□□□□□ -0.74
FMOD-201ENST00000354955 PYCARDQ9ULZ3 195 aa10.4□□□□□ -0.74
FMOD-201ENST00000354955 CT47B1P0C2W7 299 aaPredicted RBP10.4□□□□□ -0.74
FMOD-201ENST00000354955 PTGS1P23219 599 aa10.4□□□□□ -0.74
FMOD-201ENST00000354955 AMPHP49418 695 aa10.4□□□□□ -0.74
FMOD-201ENST00000354955 CSPP1Q1MSJ5 1256 aa10.4□□□□□ -0.74
FMOD-201ENST00000354955 FILIP1Q7Z7B0 1213 aa10.4□□□□□ -0.74
FMOD-201ENST00000354955 ANKRD44Q8N8A2 993 aa10.4□□□□□ -0.74
FMOD-201ENST00000354955 LRRC2Q9BYS8 371 aa10.4□□□□□ -0.74
FMOD-201ENST00000354955 TRIM5Q9C035 493 aa10.4□□□□□ -0.74
FMOD-201ENST00000354955 CGNQ9P2M7 1197 aaKnown RBP10.4□□□□□ -0.74
FMOD-201ENST00000354955 NRBP1Q9UHY1 535 aa10.4□□□□□ -0.74
FMOD-201ENST00000354955 KIF3AQ9Y496 699 aa10.4□□□□□ -0.74
FMOD-201ENST00000354955 ABCC11Q96J66 1382 aa10.4□□□□□ -0.75
FMOD-201ENST00000354955 SRGAP3O43295 1099 aa10.4□□□□□ -0.75
FMOD-201ENST00000354955 GORABQ5T7V8 394 aa10.4□□□□□ -0.75
FMOD-201ENST00000354955 CWC22Q9HCG8 908 aaKnown RBP10.4□□□□□ -0.75
FMOD-201ENST00000354955 ANKRD36BQ8N2N9 1353 aa10.39□□□□□ -0.75
FMOD-201ENST00000354955 JAKMIP1Q96N16 626 aaKnown RBP10.39□□□□□ -0.75
FMOD-201ENST00000354955 PHAXQ9H814 394 aaKnown RBP10.39□□□□□ -0.75
FMOD-201ENST00000354955 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.39□□□□□ -0.75
FMOD-201ENST00000354955 NPC1L1Q9UHC9 1359 aa10.39□□□□□ -0.75
FMOD-201ENST00000354955 GNAI2P04899 355 aa10.39□□□□□ -0.75
FMOD-201ENST00000354955 PDCL2Q8N4E4 241 aa10.39□□□□□ -0.75
FMOD-201ENST00000354955 ESYT1Q9BSJ8 1104 aa10.39□□□□□ -0.75
FMOD-201ENST00000354955 TMX1Q9H3N1 280 aa10.39□□□□□ -0.75
FMOD-201ENST00000354955 ERCC6L2Q5T890 1561 aa10.39□□□□□ -0.75
FMOD-201ENST00000354955 MBD3O95983 291 aa10.38□□□□□ -0.75
FMOD-201ENST00000354955 RASEFQ8IZ41 740 aa10.38□□□□□ -0.75
FMOD-201ENST00000354955 RIOK3O14730 519 aaKnown RBP10.38□□□□□ -0.75
FMOD-201ENST00000354955 LARGE1O95461 756 aa10.38□□□□□ -0.75
FMOD-201ENST00000354955 GUCY1B3Q02153 619 aa10.38□□□□□ -0.75
FMOD-201ENST00000354955 PTPN21Q16825 1174 aa10.38□□□□□ -0.75
FMOD-201ENST00000354955 ISM2Q6H9L7 571 aa10.38□□□□□ -0.75
FMOD-201ENST00000354955 BICD2Q8TD16 824 aa10.38□□□□□ -0.75
FMOD-201ENST00000354955 PA2G4Q9UQ80 394 aaKnown RBP10.38□□□□□ -0.75
FMOD-201ENST00000354955 HSP90B1P14625 803 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms