RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 FERMT3Q86UX7 667 aa7.26□□□□□ -1.25
RFC1-201ENST00000349703 CABLES1Q8TDN4 633 aa7.26□□□□□ -1.25
RFC1-201ENST00000349703 ACSBG1Q96GR2 724 aa7.26□□□□□ -1.25
RFC1-201ENST00000349703 MAPKBP1O60336 1514 aa7.25□□□□□ -1.25
RFC1-201ENST00000349703 CCDC146Q8IYE0 955 aa7.25□□□□□ -1.25
RFC1-201ENST00000349703 VPS37AQ8NEZ2 397 aa7.25□□□□□ -1.25
RFC1-201ENST00000349703 CD44P16070 742 aaKnown RBP7.25□□□□□ -1.25
RFC1-201ENST00000349703 SERPINB4P48594 390 aa7.25□□□□□ -1.25
RFC1-201ENST00000349703 NASPP49321 788 aaPredicted RBP7.25□□□□□ -1.25
RFC1-201ENST00000349703 MSL3Q8N5Y2 521 aaKnown RBP7.25□□□□□ -1.25
RFC1-201ENST00000349703 MICAL1Q8TDZ2 1067 aa7.25□□□□□ -1.25
RFC1-201ENST00000349703 SYNJ1O43426 1573 aa7.25□□□□□ -1.25
RFC1-201ENST00000349703 LETM1O95202 739 aaPredicted RBP7.25□□□□□ -1.25
RFC1-201ENST00000349703 RRP1P56182 461 aaKnown RBP7.25□□□□□ -1.25
RFC1-201ENST00000349703 SUGT1Q9Y2Z0 365 aa7.25□□□□□ -1.25
RFC1-201ENST00000349703 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.25□□□□□ -1.25
RFC1-201ENST00000349703 SOX11P35716 441 aa7.24□□□□□ -1.25
RFC1-201ENST00000349703 NOL10Q9BSC4 688 aaKnown RBP7.24□□□□□ -1.25
RFC1-201ENST00000349703 METTL14Q9HCE5 456 aaKnown RBP7.24□□□□□ -1.25
RFC1-201ENST00000349703 LRRC9Q6ZRR7 1453 aa7.24□□□□□ -1.25
RFC1-201ENST00000349703 NFKBIBQ15653 356 aa7.24□□□□□ -1.25
RFC1-201ENST00000349703 ANO1Q5XXA6 986 aa7.24□□□□□ -1.25
RFC1-201ENST00000349703 DOLKQ9UPQ8 538 aa7.24□□□□□ -1.25
RFC1-201ENST00000349703 GOLGA6L22H0YM25 854 aa7.24□□□□□ -1.25
RFC1-201ENST00000349703 LDHBP07195 334 aaKnown RBP7.24□□□□□ -1.25
RFC1-201ENST00000349703 RALBP1Q15311 655 aa7.24□□□□□ -1.25
RFC1-201ENST00000349703 SPACA7Q96KW9 195 aa7.24□□□□□ -1.25
RFC1-201ENST00000349703 PPP1R12CQ9BZL4 782 aa7.24□□□□□ -1.25
RFC1-201ENST00000349703 PPP1R12BO60237 982 aaPredicted RBP7.24□□□□□ -1.25
RFC1-201ENST00000349703 EXOC8Q8IYI6 725 aa7.24□□□□□ -1.25
RFC1-201ENST00000349703 ZNF579Q8NAF0 562 aaKnown RBP7.24□□□□□ -1.25
RFC1-201ENST00000349703 USP25Q9UHP3 1055 aa7.24□□□□□ -1.25
RFC1-201ENST00000349703 MINDY4BA8MYZ0 360 aa7.23□□□□□ -1.25
RFC1-201ENST00000349703 CYLDQ9NQC7 956 aa7.23□□□□□ -1.25
RFC1-201ENST00000349703 DNAJC5BQ9UF47 199 aa7.23□□□□□ -1.25
RFC1-201ENST00000349703 TIAM1Q13009 1591 aa7.23□□□□□ -1.25
RFC1-201ENST00000349703 CCDC7Q96M83 1385 aa7.23□□□□□ -1.25
RFC1-201ENST00000349703 GOLGA6L3A6NEY3 463 aa7.23□□□□□ -1.25
RFC1-201ENST00000349703 TPD52L2O43399 206 aaKnown RBP7.23□□□□□ -1.25
RFC1-201ENST00000349703 NEFHP12036 1026 aa7.23□□□□□ -1.25
RFC1-201ENST00000349703 TNNI2P48788 182 aa7.23□□□□□ -1.25
RFC1-201ENST00000349703 AKT1S1Q96B36 256 aa7.23□□□□□ -1.25
RFC1-201ENST00000349703 NFE2L2Q16236 605 aa7.23□□□□□ -1.25
RFC1-201ENST00000349703 WASHC2CQ9Y4E1 1318 aa7.23□□□□□ -1.25
RFC1-201ENST00000349703 PRXQ9BXM0 1461 aa7.23□□□□□ -1.25
RFC1-201ENST00000349703 POM121CA8CG34 1229 aa7.23□□□□□ -1.25
RFC1-201ENST00000349703 TYW1BQ6NUM6 668 aa7.23□□□□□ -1.25
RFC1-201ENST00000349703 MAP3K13O43283 966 aa7.22□□□□□ -1.25
RFC1-201ENST00000349703 PNMA5Q96PV4 448 aa7.22□□□□□ -1.25
RFC1-201ENST00000349703 FRAT1Q92837 279 aaPredicted RBP7.22□□□□□ -1.25
RFC1-201ENST00000349703 PHLDB1Q86UU1 1377 aa7.22□□□□□ -1.25
RFC1-201ENST00000349703 NRDCO43847 1150 aa7.22□□□□□ -1.25
RFC1-201ENST00000349703 RRP9O43818 475 aaKnown RBP7.22□□□□□ -1.25
RFC1-201ENST00000349703 ALKBH2Q6NS38 261 aa7.22□□□□□ -1.25
RFC1-201ENST00000349703 BACH2Q9BYV9 841 aa7.22□□□□□ -1.25
RFC1-201ENST00000349703 AASDHPPTQ9NRN7 309 aa7.22□□□□□ -1.25
RFC1-201ENST00000349703 KTN1Q86UP2 1357 aaKnown RBP7.21□□□□□ -1.25
RFC1-201ENST00000349703 YY1P25490 414 aa7.21□□□□□ -1.25
RFC1-201ENST00000349703 CENPQQ7L2Z9 268 aaPredicted RBP7.21□□□□□ -1.25
RFC1-201ENST00000349703 TNIP3Q96KP6 325 aa7.21□□□□□ -1.25
RFC1-201ENST00000349703 FAM86C2PA6NEL3 165 aa7.21□□□□□ -1.26
RFC1-201ENST00000349703 DNAJC6O75061 913 aa7.21□□□□□ -1.26
RFC1-201ENST00000349703 SP100P23497 879 aaPredicted RBP7.21□□□□□ -1.26
RFC1-201ENST00000349703 SERTAD1Q9UHV2 236 aa7.21□□□□□ -1.26
RFC1-201ENST00000349703 SPG7Q9UQ90 795 aa7.21□□□□□ -1.26
RFC1-201ENST00000349703 MRVI1Q9Y6F6 885 aa7.21□□□□□ -1.26
RFC1-201ENST00000349703 SHQ1Q6PI26 577 aaKnown RBP7.21□□□□□ -1.26
RFC1-201ENST00000349703 PNMA8AQ86V59 439 aaPredicted RBP7.21□□□□□ -1.26
RFC1-201ENST00000349703 CERS3Q8IU89 383 aa7.21□□□□□ -1.26
RFC1-201ENST00000349703 SYTL4Q96C24 671 aaPredicted RBP7.21□□□□□ -1.26
RFC1-201ENST00000349703 DNAAF2Q9NVR5 837 aaKnown RBP7.21□□□□□ -1.26
RFC1-201ENST00000349703 ARHGAP27Q6ZUM4 889 aa7.21□□□□□ -1.26
RFC1-201ENST00000349703 JDP2Q8WYK2 163 aa7.21□□□□□ -1.26
RFC1-201ENST00000349703 CUX1P39880 1505 aa7.2□□□□□ -1.26
RFC1-201ENST00000349703 TOP2BQ02880 1626 aa7.2□□□□□ -1.26
RFC1-201ENST00000349703 SFI1A8K8P3 1242 aa7.2□□□□□ -1.26
RFC1-201ENST00000349703 SETQ01105 290 aaPredicted RBP7.2□□□□□ -1.26
RFC1-201ENST00000349703 RAD51AP2Q09MP3 1159 aa7.2□□□□□ -1.26
RFC1-201ENST00000349703 ARSJQ5FYB0 599 aaPredicted RBP7.2□□□□□ -1.26
RFC1-201ENST00000349703 TICAM2Q86XR7 235 aa7.2□□□□□ -1.26
RFC1-201ENST00000349703 CCDC34Q96HJ3 373 aa7.2□□□□□ -1.26
RFC1-201ENST00000349703 MFRPQ9BY79 579 aa7.2□□□□□ -1.26
RFC1-201ENST00000349703 C1orf115Q9H7X2 142 aa7.2□□□□□ -1.26
RFC1-201ENST00000349703 KIF15Q9NS87 1388 aa7.2□□□□□ -1.26
RFC1-201ENST00000349703 HAX1O00165 279 aa7.2□□□□□ -1.26
RFC1-201ENST00000349703 CNNM4Q6P4Q7 775 aa7.2□□□□□ -1.26
RFC1-201ENST00000349703 CARMIL1Q5VZK9 1371 aa7.2□□□□□ -1.26
RFC1-201ENST00000349703 ATP6V1E1P36543 226 aa7.2□□□□□ -1.26
RFC1-201ENST00000349703 MTMR2Q13614 643 aa7.2□□□□□ -1.26
RFC1-201ENST00000349703 ATP5J2-PTCD1G3V325 749 aa7.19□□□□□ -1.26
RFC1-201ENST00000349703 RRP7BPQ9NSQ0 103 aa7.19□□□□□ -1.26
RFC1-201ENST00000349703 FARP1Q9Y4F1 1045 aaPredicted RBP7.19□□□□□ -1.26
RFC1-201ENST00000349703 PCDHB11Q9Y5F2 797 aa7.19□□□□□ -1.26
RFC1-201ENST00000349703 ACAP2Q15057 778 aa7.19□□□□□ -1.26
RFC1-201ENST00000349703 SPOUT1Q5T280 376 aaKnown RBP7.19□□□□□ -1.26
RFC1-201ENST00000349703 CHAMP1Q96JM3 812 aa7.19□□□□□ -1.26
RFC1-201ENST00000349703 NLRP3Q96P20 1036 aa7.19□□□□□ -1.26
RFC1-201ENST00000349703 SPOCK3Q9BQ16 436 aa7.19□□□□□ -1.26
RFC1-201ENST00000349703 SSUH2Q9Y2M2 353 aa7.19□□□□□ -1.26
RFC1-201ENST00000349703 DYTNA2CJ06 578 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms