RNA–Protein interactions for RNA: ENST00000344893.4

AC008543.1-201, humanhuman

TSL 2 BASIC

Gene AC008543.1, Length 3,383 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008543.1-201ENST00000344893 REREQ9P2R6 1566 aa11.09□□□□□ -0.63
AC008543.1-201ENST00000344893 PHF8Q9UPP1 1060 aa11.08□□□□□ -0.64
AC008543.1-201ENST00000344893 E9PSI1 815 aa11.08□□□□□ -0.64
AC008543.1-201ENST00000344893 USHBP1Q8N6Y0 703 aa11.08□□□□□ -0.64
AC008543.1-201ENST00000344893 RWDD1Q9H446 243 aaPredicted RBP11.08□□□□□ -0.64
AC008543.1-201ENST00000344893 NRXN1Q9ULB1 1477 aa11.08□□□□□ -0.64
AC008543.1-201ENST00000344893 BAG4O95429 457 aaKnown RBP11.08□□□□□ -0.64
AC008543.1-201ENST00000344893 ZNF771Q7L3S4 317 aaPredicted RBP11.08□□□□□ -0.64
AC008543.1-201ENST00000344893 FTSJ3Q8IY81 847 aaKnown RBP11.08□□□□□ -0.64
AC008543.1-201ENST00000344893 TULP4Q9NRJ4 1543 aa11.07□□□□□ -0.64
AC008543.1-201ENST00000344893 A0A0G2JS52 829 aa11.07□□□□□ -0.64
AC008543.1-201ENST00000344893 KIAA2012Q0VF49 1180 aa11.07□□□□□ -0.64
AC008543.1-201ENST00000344893 BCL2L13Q9BXK5 485 aa11.07□□□□□ -0.64
AC008543.1-201ENST00000344893 NINLQ9Y2I6 1382 aa11.07□□□□□ -0.64
AC008543.1-201ENST00000344893 THUMPD2Q9BTF0 503 aaKnown RBP11.07□□□□□ -0.64
AC008543.1-201ENST00000344893 ANKRD36BQ8N2N9 1353 aa11.07□□□□□ -0.64
AC008543.1-201ENST00000344893 ELL2O00472 640 aaPredicted RBP11.07□□□□□ -0.64
AC008543.1-201ENST00000344893 DMRT2Q9Y5R5 561 aa11.07□□□□□ -0.64
AC008543.1-201ENST00000344893 QRICH2Q9H0J4 1663 aa11.06□□□□□ -0.64
AC008543.1-201ENST00000344893 PTMAP06454 111 aaKnown RBP11.06□□□□□ -0.64
AC008543.1-201ENST00000344893 RBM25P49756 843 aaKnown RBP11.06□□□□□ -0.64
AC008543.1-201ENST00000344893 HSP90AB2PQ58FF8 381 aa11.06□□□□□ -0.64
AC008543.1-201ENST00000344893 PRIMPOLQ96LW4 560 aa11.06□□□□□ -0.64
AC008543.1-201ENST00000344893 NPHP4O75161 1426 aaPredicted RBP11.06□□□□□ -0.64
AC008543.1-201ENST00000344893 MCTP1Q6DN14 999 aa11.06□□□□□ -0.64
AC008543.1-201ENST00000344893 HMGN5P82970 282 aaKnown RBP11.05□□□□□ -0.64
AC008543.1-201ENST00000344893 TNNQ9UQP3 1299 aa11.05□□□□□ -0.64
AC008543.1-201ENST00000344893 KIF3AQ9Y496 699 aa11.05□□□□□ -0.64
AC008543.1-201ENST00000344893 DIAPH1O60610 1272 aaKnown RBP11.05□□□□□ -0.64
AC008543.1-201ENST00000344893 RLBP1P12271 317 aa11.05□□□□□ -0.64
AC008543.1-201ENST00000344893 PDCL2Q8N4E4 241 aa11.05□□□□□ -0.64
AC008543.1-201ENST00000344893 CEP170BQ9Y4F5 1589 aaPredicted RBP11.05□□□□□ -0.64
AC008543.1-201ENST00000344893 IQGAP1P46940 1657 aa11.05□□□□□ -0.64
AC008543.1-201ENST00000344893 CD2BP2O95400 341 aaKnown RBP11.05□□□□□ -0.64
AC008543.1-201ENST00000344893 GTF2F1P35269 517 aaKnown RBP eCLIP11.05□□□□□ -0.64
AC008543.1-201ENST00000344893 TTC21BQ7Z4L5 1316 aa11.04□□□□□ -0.64
AC008543.1-201ENST00000344893 IRX5P78411 483 aaPredicted RBP11.04□□□□□ -0.64
AC008543.1-201ENST00000344893 TCP11L2Q8N4U5 519 aa11.04□□□□□ -0.64
AC008543.1-201ENST00000344893 TMEM94Q12767 1356 aa11.04□□□□□ -0.64
AC008543.1-201ENST00000344893 U2AF2P26368 475 aaKnown RBP eCLIP11.04□□□□□ -0.64
AC008543.1-201ENST00000344893 CHRNA2Q15822 529 aa11.04□□□□□ -0.64
AC008543.1-201ENST00000344893 CLEC17AQ6ZS10 378 aa11.04□□□□□ -0.64
AC008543.1-201ENST00000344893 BCL2L12Q9HB09 334 aa11.04□□□□□ -0.64
AC008543.1-201ENST00000344893 KCNJ4P48050 445 aa11.03□□□□□ -0.64
AC008543.1-201ENST00000344893 DCTN1Q14203 1278 aa11.03□□□□□ -0.64
AC008543.1-201ENST00000344893 AEBP1Q8IUX7 1158 aa11.03□□□□□ -0.64
AC008543.1-201ENST00000344893 POLKQ9UBT6 870 aa11.03□□□□□ -0.64
AC008543.1-201ENST00000344893 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.03□□□□□ -0.64
AC008543.1-201ENST00000344893 KDM5AP29375 1690 aaKnown RBP11.03□□□□□ -0.64
AC008543.1-201ENST00000344893 UBR1Q8IWV7 1749 aa11.03□□□□□ -0.64
AC008543.1-201ENST00000344893 PRKAR2BP31323 418 aa11.03□□□□□ -0.64
AC008543.1-201ENST00000344893 RBM27Q9P2N5 1060 aaKnown RBP11.03□□□□□ -0.64
AC008543.1-201ENST00000344893 K7ELQ4 463 aaPredicted RBP11.03□□□□□ -0.64
AC008543.1-201ENST00000344893 GAS2L2Q8NHY3 880 aa11.03□□□□□ -0.64
AC008543.1-201ENST00000344893 SETD1BQ9UPS6 1966 aaKnown RBP11.03□□□□□ -0.64
AC008543.1-201ENST00000344893 RNF214Q8ND24 703 aa11.02□□□□□ -0.64
AC008543.1-201ENST00000344893 CHMP4AQ9BY43 222 aa11.02□□□□□ -0.64
AC008543.1-201ENST00000344893 SULT6B1Q6IMI4 303 aa11.02□□□□□ -0.65
AC008543.1-201ENST00000344893 LMBRD1Q9NUN5 540 aa11.02□□□□□ -0.65
AC008543.1-201ENST00000344893 IFT172Q9UG01 1749 aa11.02□□□□□ -0.65
AC008543.1-201ENST00000344893 CSB-PGBD3P0DP91 1061 aa11.02□□□□□ -0.65
AC008543.1-201ENST00000344893 MPNDQ8N594 471 aa11.02□□□□□ -0.65
AC008543.1-201ENST00000344893 KRT28Q7Z3Y7 464 aa11.01□□□□□ -0.65
AC008543.1-201ENST00000344893 SBNO2Q9Y2G9 1366 aa11.01□□□□□ -0.65
AC008543.1-201ENST00000344893 TSR2Q969E8 191 aaKnown RBP11.01□□□□□ -0.65
AC008543.1-201ENST00000344893 KIF2CQ99661 725 aa11□□□□□ -0.65
AC008543.1-201ENST00000344893 C19orf44Q9H6X5 657 aa11□□□□□ -0.65
AC008543.1-201ENST00000344893 SYCE3A1L190 88 aa11□□□□□ -0.65
AC008543.1-201ENST00000344893 NOLC1Q14978 699 aaKnown RBP eCLIP11□□□□□ -0.65
AC008543.1-201ENST00000344893 ZFP91Q96JP5 570 aaPredicted RBP11□□□□□ -0.65
AC008543.1-201ENST00000344893 RBM42Q9BTD8 480 aaKnown RBP11□□□□□ -0.65
AC008543.1-201ENST00000344893 MYO3AQ8NEV4 1616 aa11□□□□□ -0.65
AC008543.1-201ENST00000344893 FAM83GA6ND36 823 aa11□□□□□ -0.65
AC008543.1-201ENST00000344893 RARSP54136 660 aaKnown RBP11□□□□□ -0.65
AC008543.1-201ENST00000344893 LRSAM1Q6UWE0 723 aa11□□□□□ -0.65
AC008543.1-201ENST00000344893 ARHGEF28Q8N1W1 1705 aaKnown RBP10.99□□□□□ -0.65
AC008543.1-201ENST00000344893 NUTM2BA6NNL0 878 aaPredicted RBP10.99□□□□□ -0.65
AC008543.1-201ENST00000344893 NUTM2EB1AL46 878 aaPredicted RBP10.99□□□□□ -0.65
AC008543.1-201ENST00000344893 PRPF40AO75400 957 aaKnown RBP10.99□□□□□ -0.65
AC008543.1-201ENST00000344893 NUTM2AQ8IVF1 878 aaPredicted RBP10.99□□□□□ -0.65
AC008543.1-201ENST00000344893 C17orf53Q8N3J3 647 aaPredicted RBP10.99□□□□□ -0.65
AC008543.1-201ENST00000344893 PIBF1Q8WXW3 757 aa10.99□□□□□ -0.65
AC008543.1-201ENST00000344893 LRRC59Q96AG4 307 aaKnown RBP10.99□□□□□ -0.65
AC008543.1-201ENST00000344893 SETBP1Q9Y6X0 1596 aa10.99□□□□□ -0.65
AC008543.1-201ENST00000344893 GPT2Q8TD30 523 aa10.99□□□□□ -0.65
AC008543.1-201ENST00000344893 PHACTR3Q96KR7 559 aa10.99□□□□□ -0.65
AC008543.1-201ENST00000344893 MIS18AQ9NYP9 233 aa10.98□□□□□ -0.65
AC008543.1-201ENST00000344893 ZNF428Q96B54 188 aa10.98□□□□□ -0.65
AC008543.1-201ENST00000344893 DNAJC2Q99543 621 aaKnown RBP10.98□□□□□ -0.65
AC008543.1-201ENST00000344893 TMEM63CQ9P1W3 806 aa10.98□□□□□ -0.65
AC008543.1-201ENST00000344893 STRN4Q9NRL3 753 aa10.97□□□□□ -0.65
AC008543.1-201ENST00000344893 MAP3K19Q56UN5 1328 aa10.97□□□□□ -0.65
AC008543.1-201ENST00000344893 NECTIN2Q92692 538 aa10.97□□□□□ -0.65
AC008543.1-201ENST00000344893 IRX3P78415 501 aaPredicted RBP10.97□□□□□ -0.65
AC008543.1-201ENST00000344893 CERS3Q8IU89 383 aa10.97□□□□□ -0.65
AC008543.1-201ENST00000344893 FEZ1Q99689 392 aa10.97□□□□□ -0.65
AC008543.1-201ENST00000344893 OGFRQ9NZT2 677 aa10.96□□□□□ -0.65
AC008543.1-201ENST00000344893 AK9Q5TCS8 1911 aa10.96□□□□□ -0.65
AC008543.1-201ENST00000344893 KIF16BQ96L93 1317 aa10.96□□□□□ -0.65
AC008543.1-201ENST00000344893 NUCB2P80303 420 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms