RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 ZBTB7CA1YPR0 619 aa25.37■■□□□ 1.65
CDHR4-201ENST00000343366 MTFR1LQ9H019 292 aa25.37■■□□□ 1.65
CDHR4-201ENST00000343366 LTN1O94822 1766 aa25.36■■□□□ 1.65
CDHR4-201ENST00000343366 CC2D1BQ5T0F9 858 aaKnown RBP25.36■■□□□ 1.65
CDHR4-201ENST00000343366 STK32BQ9NY57 414 aa25.36■■□□□ 1.65
CDHR4-201ENST00000343366 BTAF1O14981 1849 aa25.35■■□□□ 1.65
CDHR4-201ENST00000343366 MAP2P11137 1827 aaKnown RBP25.35■■□□□ 1.65
CDHR4-201ENST00000343366 QSER1Q2KHR3 1735 aa25.34■■□□□ 1.65
CDHR4-201ENST00000343366 RTL1A6NKG5 1358 aa25.34■■□□□ 1.65
CDHR4-201ENST00000343366 CEP350Q5VT06 3117 aa25.33■■□□□ 1.65
CDHR4-201ENST00000343366 SOX12O15370 315 aa25.33■■□□□ 1.65
CDHR4-201ENST00000343366 RALBP1Q15311 655 aa25.32■■□□□ 1.64
CDHR4-201ENST00000343366 EXOC5O00471 708 aa25.3■■□□□ 1.64
CDHR4-201ENST00000343366 AMPHP49418 695 aa25.3■■□□□ 1.64
CDHR4-201ENST00000343366 MAP3K19Q56UN5 1328 aa25.29■■□□□ 1.64
CDHR4-201ENST00000343366 IP6K1Q92551 441 aa25.28■■□□□ 1.64
CDHR4-201ENST00000343366 FLT4P35916 1363 aa25.28■■□□□ 1.64
CDHR4-201ENST00000343366 C1QTNF8P60827 252 aa25.27■■□□□ 1.64
CDHR4-201ENST00000343366 TUBGCP6Q96RT7 1819 aa25.26■■□□□ 1.63
CDHR4-201ENST00000343366 TNNT2P45379 298 aaPredicted RBP25.26■■□□□ 1.63
CDHR4-201ENST00000343366 ARXQ96QS3 562 aa25.26■■□□□ 1.63
CDHR4-201ENST00000343366 POLKQ9UBT6 870 aa25.26■■□□□ 1.63
CDHR4-201ENST00000343366 SMG6Q86US8 1419 aaKnown RBP25.26■■□□□ 1.63
CDHR4-201ENST00000343366 RRS1Q15050 365 aaKnown RBP25.25■■□□□ 1.63
CDHR4-201ENST00000343366 ERBB3P21860 1342 aa25.24■■□□□ 1.63
CDHR4-201ENST00000343366 ZNF827Q17R98 1081 aa25.24■■□□□ 1.63
CDHR4-201ENST00000343366 CSB-PGBD3P0DP91 1061 aa25.23■■□□□ 1.63
CDHR4-201ENST00000343366 HOXC9P31274 260 aa25.23■■□□□ 1.63
CDHR4-201ENST00000343366 INSRP06213 1382 aa25.22■■□□□ 1.63
CDHR4-201ENST00000343366 LRRC4BQ9NT99 713 aa25.22■■□□□ 1.63
CDHR4-201ENST00000343366 FAM208AQ9UK61 1670 aaKnown RBP25.22■■□□□ 1.63
CDHR4-201ENST00000343366 SENP3-EIF4A1A0A087X0R7 540 aa25.21■■□□□ 1.63
CDHR4-201ENST00000343366 ANP32CO43423 234 aa25.21■■□□□ 1.63
CDHR4-201ENST00000343366 EMILIN1Q9Y6C2 1016 aa25.21■■□□□ 1.63
CDHR4-201ENST00000343366 SHANK3Q9BYB0 1731 aa25.2■■□□□ 1.63
CDHR4-201ENST00000343366 FBLN1P23142 703 aa25.2■■□□□ 1.62
CDHR4-201ENST00000343366 CNGB1Q14028 1251 aaPredicted RBP25.2■■□□□ 1.62
CDHR4-201ENST00000343366 ACSBG1Q96GR2 724 aa25.2■■□□□ 1.62
CDHR4-201ENST00000343366 PRKRIP1Q9H875 184 aaPredicted RBP25.2■■□□□ 1.62
CDHR4-201ENST00000343366 PPM1GO15355 546 aaPredicted RBP25.19■■□□□ 1.62
CDHR4-201ENST00000343366 AKT1S1Q96B36 256 aa25.19■■□□□ 1.62
CDHR4-201ENST00000343366 KAT6BQ8WYB5 2073 aa25.18■■□□□ 1.62
CDHR4-201ENST00000343366 MTHFSP49914 203 aa25.18■■□□□ 1.62
CDHR4-201ENST00000343366 LY75O60449 1722 aa25.17■■□□□ 1.62
CDHR4-201ENST00000343366 MYBBP1AQ9BQG0 1328 aaKnown RBP25.17■■□□□ 1.62
CDHR4-201ENST00000343366 PPP2R1AP30153 589 aa25.17■■□□□ 1.62
CDHR4-201ENST00000343366 CFAP53Q96M91 514 aa25.17■■□□□ 1.62
CDHR4-201ENST00000343366 IL2RBP14784 551 aa25.15■■□□□ 1.62
CDHR4-201ENST00000343366 ANKRD24Q8TF21 1146 aa25.15■■□□□ 1.62
CDHR4-201ENST00000343366 HSP90AB2PQ58FF8 381 aa25.13■■□□□ 1.61
CDHR4-201ENST00000343366 SLC16A10Q8TF71 515 aa25.13■■□□□ 1.61
CDHR4-201ENST00000343366 PNPLA7Q6ZV29 1317 aa25.12■■□□□ 1.61
CDHR4-201ENST00000343366 DOT1LQ8TEK3 1739 aa25.1■■□□□ 1.61
CDHR4-201ENST00000343366 NLRP2Q9NX02 1062 aa25.1■■□□□ 1.61
CDHR4-201ENST00000343366 SLC27A3Q5K4L6 730 aa25.09■■□□□ 1.61
CDHR4-201ENST00000343366 DIEXFQ68CQ4 756 aaKnown RBP25.08■■□□□ 1.61
CDHR4-201ENST00000343366 DIAPH1O60610 1272 aaKnown RBP25.07■■□□□ 1.6
CDHR4-201ENST00000343366 GPR162Q16538 588 aa25.07■■□□□ 1.6
CDHR4-201ENST00000343366 NUDCQ9Y266 331 aa25.07■■□□□ 1.6
CDHR4-201ENST00000343366 EIF4A2Q14240 407 aaKnown RBP25.06■■□□□ 1.6
CDHR4-201ENST00000343366 LTV1Q96GA3 475 aaPredicted RBP25.06■■□□□ 1.6
CDHR4-201ENST00000343366 IFFO2Q5TF58 517 aa25.05■■□□□ 1.6
CDHR4-201ENST00000343366 NLGN2Q8NFZ4 835 aa25.05■■□□□ 1.6
CDHR4-201ENST00000343366 GIGYF1O75420 1035 aaPredicted RBP25.04■■□□□ 1.6
CDHR4-201ENST00000343366 PLEKHG2Q9H7P9 1386 aa25.03■■□□□ 1.6
CDHR4-201ENST00000343366 RGPD2P0DJD1 1756 aa25.03■■□□□ 1.6
CDHR4-201ENST00000343366 COL3A1P02461 1466 aaPredicted RBP25.02■■□□□ 1.6
CDHR4-201ENST00000343366 IL13P35225 146 aa25.02■■□□□ 1.6
CDHR4-201ENST00000343366 POLD1P28340 1107 aa25.01■■□□□ 1.59
CDHR4-201ENST00000343366 YBX3P16989 372 aaKnown RBP eCLIP25■■□□□ 1.59
CDHR4-201ENST00000343366 NBPF6Q5VWK0 638 aa25■■□□□ 1.59
CDHR4-201ENST00000343366 NBPF4Q96M43 638 aa25■■□□□ 1.59
CDHR4-201ENST00000343366 IGSF1Q8N6C5 1336 aa25■■□□□ 1.59
CDHR4-201ENST00000343366 NCAPD2Q15021 1401 aa25■■□□□ 1.59
CDHR4-201ENST00000343366 EYA1Q99502 592 aa24.99■■□□□ 1.59
CDHR4-201ENST00000343366 KCNQ4P56696 695 aa24.98■■□□□ 1.59
CDHR4-201ENST00000343366 TFCP2L1Q9NZI6 479 aa24.96■■□□□ 1.59
CDHR4-201ENST00000343366 TAF1LQ8IZX4 1826 aa24.96■■□□□ 1.59
CDHR4-201ENST00000343366 RAPGEF4Q8WZA2 1011 aa24.95■■□□□ 1.58
CDHR4-201ENST00000343366 MEGF6O75095 1541 aa24.95■■□□□ 1.58
CDHR4-201ENST00000343366 C5P01031 1676 aa24.94■■□□□ 1.58
CDHR4-201ENST00000343366 PRIM1P49642 420 aaKnown RBP24.94■■□□□ 1.58
CDHR4-201ENST00000343366 KLHL34Q8N239 644 aa24.94■■□□□ 1.58
CDHR4-201ENST00000343366 DDX54Q8TDD1 881 aaKnown RBP24.94■■□□□ 1.58
CDHR4-201ENST00000343366 PNNQ9H307 717 aaKnown RBP24.94■■□□□ 1.58
CDHR4-201ENST00000343366 KDRP35968 1356 aa24.93■■□□□ 1.58
CDHR4-201ENST00000343366 U2SURPO15042 1029 aaKnown RBP24.93■■□□□ 1.58
CDHR4-201ENST00000343366 ADCY9O60503 1353 aa24.93■■□□□ 1.58
CDHR4-201ENST00000343366 TATP17735 454 aaPredicted RBP24.92■■□□□ 1.58
CDHR4-201ENST00000343366 GRIN3BO60391 1043 aa24.91■■□□□ 1.58
CDHR4-201ENST00000343366 COL23A1Q86Y22 540 aaPredicted RBP24.91■■□□□ 1.58
CDHR4-201ENST00000343366 PELP1Q8IZL8 1130 aaKnown RBP24.91■■□□□ 1.58
CDHR4-201ENST00000343366 ATP10DQ9P241 1426 aa24.91■■□□□ 1.58
CDHR4-201ENST00000343366 SULT6B1Q6IMI4 303 aa24.9■■□□□ 1.58
CDHR4-201ENST00000343366 TOGARAM1Q9Y4F4 1720 aa24.89■■□□□ 1.58
CDHR4-201ENST00000343366 CCER2I3L3R5 266 aa24.89■■□□□ 1.58
CDHR4-201ENST00000343366 FCHSD2O94868 740 aa24.89■■□□□ 1.58
CDHR4-201ENST00000343366 U2AF1L5P0DN76 240 aaPredicted RBP24.89■■□□□ 1.58
CDHR4-201ENST00000343366 U2AF1Q01081 240 aaKnown RBP eCLIP24.89■■□□□ 1.58
CDHR4-201ENST00000343366 WDR43Q15061 677 aaKnown RBP eCLIP24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms