RNA–Protein interactions for RNA: ENST00000343253.11

CCDC18-201, Transcript of coiled-coil domain containing 18, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC18, Length 4,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-201ENST00000343253 IGF1RP08069 1367 aa12.7□□□□□ -0.38
CCDC18-201ENST00000343253 SLC3A2P08195 630 aaKnown RBP12.7□□□□□ -0.38
CCDC18-201ENST00000343253 USP25Q9UHP3 1055 aa12.7□□□□□ -0.38
CCDC18-201ENST00000343253 TOP1P11387 765 aaKnown RBP12.69□□□□□ -0.38
CCDC18-201ENST00000343253 BMP2KQ9NSY1 1161 aaPredicted RBP12.69□□□□□ -0.38
CCDC18-201ENST00000343253 HMOX1P09601 288 aa12.69□□□□□ -0.38
CCDC18-201ENST00000343253 STK3Q13188 491 aa12.69□□□□□ -0.38
CCDC18-201ENST00000343253 ARAP1Q96P48 1450 aa12.69□□□□□ -0.38
CCDC18-201ENST00000343253 SPECC1LQ69YQ0 1117 aa12.69□□□□□ -0.38
CCDC18-201ENST00000343253 CNKSR2Q8WXI2 1034 aa12.69□□□□□ -0.38
CCDC18-201ENST00000343253 PLEKHH1Q9ULM0 1364 aa12.69□□□□□ -0.38
CCDC18-201ENST00000343253 CETN2P41208 172 aa12.68□□□□□ -0.38
CCDC18-201ENST00000343253 NOB1Q9ULX3 412 aaKnown RBP12.68□□□□□ -0.38
CCDC18-201ENST00000343253 RRBP1Q9P2E9 1410 aaKnown RBP12.68□□□□□ -0.38
CCDC18-201ENST00000343253 IRX3P78415 501 aaPredicted RBP12.68□□□□□ -0.38
CCDC18-201ENST00000343253 IBSPP21815 317 aaPredicted RBP12.68□□□□□ -0.38
CCDC18-201ENST00000343253 RPAP2Q8IXW5 612 aaPredicted RBP12.68□□□□□ -0.38
CCDC18-201ENST00000343253 GCOM1H8Y6P7 765 aaPredicted RBP12.68□□□□□ -0.38
CCDC18-201ENST00000343253 MYZAPP0CAP1 466 aa12.68□□□□□ -0.38
CCDC18-201ENST00000343253 NF2P35240 595 aa12.68□□□□□ -0.38
CCDC18-201ENST00000343253 IFFO1Q0D2I5 559 aa12.67□□□□□ -0.38
CCDC18-201ENST00000343253 GIGYF2Q6Y7W6 1299 aaKnown RBP12.67□□□□□ -0.38
CCDC18-201ENST00000343253 SPATA24Q86W54 205 aa12.67□□□□□ -0.38
CCDC18-201ENST00000343253 DDX19AQ9NUU7 478 aaKnown RBP12.67□□□□□ -0.38
CCDC18-201ENST00000343253 JAKMIP1Q96N16 626 aaKnown RBP12.67□□□□□ -0.38
CCDC18-201ENST00000343253 FGD6Q6ZV73 1430 aa12.67□□□□□ -0.38
CCDC18-201ENST00000343253 KLHL40Q2TBA0 621 aa12.67□□□□□ -0.38
CCDC18-201ENST00000343253 SPECC1Q5M775 1068 aa12.67□□□□□ -0.38
CCDC18-201ENST00000343253 NAA15Q9BXJ9 866 aaKnown RBP12.67□□□□□ -0.38
CCDC18-201ENST00000343253 CCDC57Q2TAC2 916 aa12.67□□□□□ -0.38
CCDC18-201ENST00000343253 C1orf115Q9H7X2 142 aa12.67□□□□□ -0.38
CCDC18-201ENST00000343253 CTNNA3Q9UI47 895 aa12.67□□□□□ -0.38
CCDC18-201ENST00000343253 SPDYE4A6NLX3 237 aa12.66□□□□□ -0.38
CCDC18-201ENST00000343253 TNPO1Q92973 898 aaKnown RBP12.66□□□□□ -0.38
CCDC18-201ENST00000343253 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.66□□□□□ -0.384e-6■■□□□ 13.6
CCDC18-201ENST00000343253 LRRC9Q6ZRR7 1453 aa12.66□□□□□ -0.38
CCDC18-201ENST00000343253 C11orf95C9JLR9 678 aaPredicted RBP12.66□□□□□ -0.38
CCDC18-201ENST00000343253 USO1O60763 962 aaKnown RBP12.66□□□□□ -0.38
CCDC18-201ENST00000343253 GAS2L2Q8NHY3 880 aa12.66□□□□□ -0.38
CCDC18-201ENST00000343253 WASF1Q92558 559 aa12.66□□□□□ -0.38
CCDC18-201ENST00000343253 SH2B1Q9NRF2 756 aaPredicted RBP12.66□□□□□ -0.38
CCDC18-201ENST00000343253 NACAP1Q9BZK3 213 aa12.66□□□□□ -0.38
CCDC18-201ENST00000343253 SCAPERQ9BY12 1400 aa12.66□□□□□ -0.38
CCDC18-201ENST00000343253 TBC1D2Q9BYX2 928 aa12.65□□□□□ -0.38
CCDC18-201ENST00000343253 CEP131Q9UPN4 1083 aa12.65□□□□□ -0.38
CCDC18-201ENST00000343253 SNW1Q13573 536 aaKnown RBP12.65□□□□□ -0.38
CCDC18-201ENST00000343253 CCDC113Q9H0I3 377 aa12.65□□□□□ -0.38
CCDC18-201ENST00000343253 CCDC171Q6TFL3 1326 aa12.65□□□□□ -0.38
CCDC18-201ENST00000343253 GGNBP2Q9H3C7 697 aa12.65□□□□□ -0.38
CCDC18-201ENST00000343253 ARFGAP3Q9NP61 516 aa12.65□□□□□ -0.38
CCDC18-201ENST00000343253 KDM4AO75164 1064 aa12.65□□□□□ -0.39
CCDC18-201ENST00000343253 HSPA4P34932 840 aa12.65□□□□□ -0.39
CCDC18-201ENST00000343253 AIMP1Q12904 312 aaKnown RBP12.65□□□□□ -0.39
CCDC18-201ENST00000343253 ADCY5O95622 1261 aa12.64□□□□□ -0.39
CCDC18-201ENST00000343253 STAMBPO95630 424 aa12.64□□□□□ -0.39
CCDC18-201ENST00000343253 TUBB4AP04350 444 aa12.64□□□□□ -0.39
CCDC18-201ENST00000343253 CCDC158Q5M9N0 1113 aa12.64□□□□□ -0.39
CCDC18-201ENST00000343253 TRMT1Q9NXH9 659 aaKnown RBP12.64□□□□□ -0.39
CCDC18-201ENST00000343253 CAMK4Q16566 473 aa12.64□□□□□ -0.39
CCDC18-201ENST00000343253 CCDC69A6NI79 296 aa12.63□□□□□ -0.39
CCDC18-201ENST00000343253 CEP135Q66GS9 1140 aa12.63□□□□□ -0.39
CCDC18-201ENST00000343253 VPS36Q86VN1 386 aa12.63□□□□□ -0.39
CCDC18-201ENST00000343253 RAPGEF4Q8WZA2 1011 aa12.63□□□□□ -0.39
CCDC18-201ENST00000343253 FYB1O15117 783 aa12.63□□□□□ -0.39
CCDC18-201ENST00000343253 PRKAR2BP31323 418 aa12.63□□□□□ -0.39
CCDC18-201ENST00000343253 HS1BP3Q53T59 392 aa12.63□□□□□ -0.39
CCDC18-201ENST00000343253 FERMT3Q86UX7 667 aa12.63□□□□□ -0.39
CCDC18-201ENST00000343253 PAF1Q8N7H5 531 aa12.63□□□□□ -0.39
CCDC18-201ENST00000343253 RAI14Q9P0K7 980 aa12.63□□□□□ -0.39
CCDC18-201ENST00000343253 MYOM3Q5VTT5 1437 aa12.62□□□□□ -0.39
CCDC18-201ENST00000343253 SSFA2P28290 1259 aa12.62□□□□□ -0.39
CCDC18-201ENST00000343253 PPM1EQ8WY54 764 aa12.62□□□□□ -0.39
CCDC18-201ENST00000343253 FKBP15Q5T1M5 1219 aa12.62□□□□□ -0.39
CCDC18-201ENST00000343253 CCDC184Q52MB2 194 aa12.62□□□□□ -0.39
CCDC18-201ENST00000343253 C6orf163Q5TEZ5 329 aa12.62□□□□□ -0.39
CCDC18-201ENST00000343253 ZSCAN25Q6NSZ9 544 aa12.62□□□□□ -0.39
CCDC18-201ENST00000343253 TAOK3Q9H2K8 898 aa12.62□□□□□ -0.39
CCDC18-201ENST00000343253 YEATS4O95619 227 aa12.62□□□□□ -0.39
CCDC18-201ENST00000343253 SLC4A2P04920 1241 aa12.62□□□□□ -0.39
CCDC18-201ENST00000343253 CCDC150Q8NCX0 1101 aa12.62□□□□□ -0.39
CCDC18-201ENST00000343253 CEP63Q96MT8 703 aa12.62□□□□□ -0.39
CCDC18-201ENST00000343253 ZHX3Q9H4I2 956 aa12.62□□□□□ -0.39
CCDC18-201ENST00000343253 RBM25P49756 843 aaKnown RBP12.61□□□□□ -0.39
CCDC18-201ENST00000343253 ZNF165P49910 485 aa12.61□□□□□ -0.39
CCDC18-201ENST00000343253 IKQ13123 557 aaPredicted RBP12.61□□□□□ -0.39
CCDC18-201ENST00000343253 NOLC1Q14978 699 aaKnown RBP eCLIP12.61□□□□□ -0.39
CCDC18-201ENST00000343253 CCDC94Q9BW85 323 aaPredicted RBP12.61□□□□□ -0.39
CCDC18-201ENST00000343253 GSTTP1A0A1W2PQM5 241 aa12.61□□□□□ -0.39
CCDC18-201ENST00000343253 DESP17661 470 aa12.61□□□□□ -0.39
CCDC18-201ENST00000343253 SOGA3Q5TF21 947 aa12.61□□□□□ -0.39
CCDC18-201ENST00000343253 SRRTQ9BXP5 876 aaKnown RBP12.61□□□□□ -0.39
CCDC18-201ENST00000343253 ZKSCAN5Q9Y2L8 839 aa12.61□□□□□ -0.39
CCDC18-201ENST00000343253 TSR2Q969E8 191 aaKnown RBP12.61□□□□□ -0.39
CCDC18-201ENST00000343253 MTMR7Q9Y216 660 aa12.61□□□□□ -0.39
CCDC18-201ENST00000343253 FEZ1Q99689 392 aa12.61□□□□□ -0.39
CCDC18-201ENST00000343253 SEPT11Q9NVA2 429 aaKnown RBP12.61□□□□□ -0.39
CCDC18-201ENST00000343253 BAG4O95429 457 aaKnown RBP12.6□□□□□ -0.39
CCDC18-201ENST00000343253 TUBB4BP68371 445 aa12.6□□□□□ -0.39
CCDC18-201ENST00000343253 HLTFQ14527 1009 aaKnown RBP eCLIP12.6□□□□□ -0.39
CCDC18-201ENST00000343253 CASTP20810 708 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms