RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 MYOM1P52179 1685 aa18.15■□□□□ 0.5
NECTIN1-203ENST00000341398 TATP17735 454 aaPredicted RBP18.15■□□□□ 0.5
NECTIN1-203ENST00000341398 NBPF6Q5VWK0 638 aa18.15■□□□□ 0.5
NECTIN1-203ENST00000341398 NBPF4Q96M43 638 aa18.15■□□□□ 0.5
NECTIN1-203ENST00000341398 ARXQ96QS3 562 aa18.15■□□□□ 0.5
NECTIN1-203ENST00000341398 SYT17Q9BSW7 474 aa18.15■□□□□ 0.5
NECTIN1-203ENST00000341398 FHDC1Q9C0D6 1143 aaPredicted RBP18.15■□□□□ 0.5
NECTIN1-203ENST00000341398 KIF20BQ96Q89 1820 aa18.14■□□□□ 0.49
NECTIN1-203ENST00000341398 KIF24Q5T7B8 1368 aa18.13■□□□□ 0.49
NECTIN1-203ENST00000341398 ZNF827Q17R98 1081 aa18.13■□□□□ 0.49
NECTIN1-203ENST00000341398 TFCP2L1Q9NZI6 479 aa18.13■□□□□ 0.49
NECTIN1-203ENST00000341398 PAPPAQ13219 1627 aa18.12■□□□□ 0.49
NECTIN1-203ENST00000341398 POLD1P28340 1107 aa18.12■□□□□ 0.49
NECTIN1-203ENST00000341398 AKT1S1Q96B36 256 aa18.12■□□□□ 0.49
NECTIN1-203ENST00000341398 SGIP1Q9BQI5 828 aa18.12■□□□□ 0.49
NECTIN1-203ENST00000341398 INSRP06213 1382 aa18.12■□□□□ 0.49
NECTIN1-203ENST00000341398 HSP90AB2PQ58FF8 381 aa18.11■□□□□ 0.49
NECTIN1-203ENST00000341398 USHBP1Q8N6Y0 703 aa18.11■□□□□ 0.49
NECTIN1-203ENST00000341398 FLT4P35916 1363 aa18.11■□□□□ 0.49
NECTIN1-203ENST00000341398 DOT1LQ8TEK3 1739 aa18.11■□□□□ 0.49
NECTIN1-203ENST00000341398 CLSPNQ9HAW4 1339 aa18.1■□□□□ 0.49
NECTIN1-203ENST00000341398 MEGF6O75095 1541 aa18.1■□□□□ 0.49
NECTIN1-203ENST00000341398 QSER1Q2KHR3 1735 aa18.1■□□□□ 0.49
NECTIN1-203ENST00000341398 UTRNP46939 3433 aa18.09■□□□□ 0.49
NECTIN1-203ENST00000341398 CCNL1Q9UK58 526 aaPredicted RBP18.09■□□□□ 0.49
NECTIN1-203ENST00000341398 PCDH11XQ9BZA7 1347 aa18.09■□□□□ 0.49
NECTIN1-203ENST00000341398 PCDH11YQ9BZA8 1340 aa18.09■□□□□ 0.49
NECTIN1-203ENST00000341398 LY75O60449 1722 aa18.08■□□□□ 0.48
NECTIN1-203ENST00000341398 SHANK3Q9BYB0 1731 aa18.08■□□□□ 0.48
NECTIN1-203ENST00000341398 CHD4Q14839 1912 aa18.08■□□□□ 0.48
NECTIN1-203ENST00000341398 CARD14Q9BXL6 1004 aa18.07■□□□□ 0.48
NECTIN1-203ENST00000341398 PCGF6Q9BYE7 350 aa18.07■□□□□ 0.48
NECTIN1-203ENST00000341398 PPM1GO15355 546 aaPredicted RBP18.06■□□□□ 0.48
NECTIN1-203ENST00000341398 KCNQ4P56696 695 aa18.06■□□□□ 0.48
NECTIN1-203ENST00000341398 NSD3Q9BZ95 1437 aa18.06■□□□□ 0.48
NECTIN1-203ENST00000341398 PNPLA7Q6ZV29 1317 aa18.06■□□□□ 0.48
NECTIN1-203ENST00000341398 MAP3K5Q99683 1374 aa18.06■□□□□ 0.48
NECTIN1-203ENST00000341398 MSH5O43196 834 aa18.05■□□□□ 0.48
NECTIN1-203ENST00000341398 MAP2P11137 1827 aaKnown RBP18.05■□□□□ 0.48
NECTIN1-203ENST00000341398 NSD2O96028 1365 aa18.05■□□□□ 0.48
NECTIN1-203ENST00000341398 KLHL34Q8N239 644 aa18.04■□□□□ 0.48
NECTIN1-203ENST00000341398 EMILIN1Q9Y6C2 1016 aa18.04■□□□□ 0.48
NECTIN1-203ENST00000341398 GPR162Q16538 588 aa18.04■□□□□ 0.48
NECTIN1-203ENST00000341398 POLR3GLQ9BT43 218 aa18.04■□□□□ 0.48
NECTIN1-203ENST00000341398 SPG7Q9UQ90 795 aa18.04■□□□□ 0.48
NECTIN1-203ENST00000341398 MPRIPQ6WCQ1 1025 aa18.03■□□□□ 0.48
NECTIN1-203ENST00000341398 FLAD1Q8NFF5 587 aa18.03■□□□□ 0.48
NECTIN1-203ENST00000341398 SMARCC1Q92922 1105 aaPredicted RBP18.03■□□□□ 0.48
NECTIN1-203ENST00000341398 ZNF784Q8NCA9 323 aaPredicted RBP18.02■□□□□ 0.47
NECTIN1-203ENST00000341398 TUBGCP6Q96RT7 1819 aa18.02■□□□□ 0.47
NECTIN1-203ENST00000341398 WASHC2AQ641Q2 1341 aa18.02■□□□□ 0.47
NECTIN1-203ENST00000341398 SENP3-EIF4A1A0A087X0R7 540 aa18.01■□□□□ 0.47
NECTIN1-203ENST00000341398 IFFO2Q5TF58 517 aa18.01■□□□□ 0.47
NECTIN1-203ENST00000341398 CYP27B1O15528 508 aa18■□□□□ 0.47
NECTIN1-203ENST00000341398 COL24A1Q17RW2 1714 aa18■□□□□ 0.47
NECTIN1-203ENST00000341398 ITGB4P16144 1822 aa17.99■□□□□ 0.47
NECTIN1-203ENST00000341398 EIF4G2P78344 907 aaKnown RBP eCLIP17.99■□□□□ 0.47
NECTIN1-203ENST00000341398 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.99■□□□□ 0.47
NECTIN1-203ENST00000341398 COL23A1Q86Y22 540 aaPredicted RBP17.98■□□□□ 0.47
NECTIN1-203ENST00000341398 PALLDQ8WX93 1383 aa17.98■□□□□ 0.47
NECTIN1-203ENST00000341398 NKX1-1Q15270 411 aaPredicted RBP17.97■□□□□ 0.47
NECTIN1-203ENST00000341398 PELP1Q8IZL8 1130 aaKnown RBP17.97■□□□□ 0.47
NECTIN1-203ENST00000341398 C5P01031 1676 aa17.96■□□□□ 0.47
NECTIN1-203ENST00000341398 EYA1Q99502 592 aa17.96■□□□□ 0.47
NECTIN1-203ENST00000341398 POLKQ9UBT6 870 aa17.96■□□□□ 0.47
NECTIN1-203ENST00000341398 TAF1LQ8IZX4 1826 aa17.96■□□□□ 0.47
NECTIN1-203ENST00000341398 PKD1L3Q7Z443 1732 aa17.96■□□□□ 0.47
NECTIN1-203ENST00000341398 IFNL2Q8IZJ0 200 aa17.95■□□□□ 0.46
NECTIN1-203ENST00000341398 AK7Q96M32 723 aa17.95■□□□□ 0.46
NECTIN1-203ENST00000341398 ANKRD26Q9UPS8 1709 aa17.95■□□□□ 0.46
NECTIN1-203ENST00000341398 TNNT2P45379 298 aaPredicted RBP17.94■□□□□ 0.46
NECTIN1-203ENST00000341398 PIGBQ92521 554 aa17.94■□□□□ 0.46
NECTIN1-203ENST00000341398 TMOD3Q9NYL9 352 aa17.94■□□□□ 0.46
NECTIN1-203ENST00000341398 NCAPD2Q15021 1401 aa17.94■□□□□ 0.46
NECTIN1-203ENST00000341398 GRIN3BO60391 1043 aa17.92■□□□□ 0.46
NECTIN1-203ENST00000341398 HSPA5P11021 654 aaKnown RBP17.91■□□□□ 0.46
NECTIN1-203ENST00000341398 C1QTNF8P60827 252 aa17.91■□□□□ 0.46
NECTIN1-203ENST00000341398 MSL1Q68DK7 614 aa17.91■□□□□ 0.46
NECTIN1-203ENST00000341398 CCER1Q8TC90 406 aaPredicted RBP17.91■□□□□ 0.46
NECTIN1-203ENST00000341398 PANK3Q9H999 370 aa17.91■□□□□ 0.46
NECTIN1-203ENST00000341398 CEP350Q5VT06 3117 aa17.91■□□□□ 0.46
NECTIN1-203ENST00000341398 EIF4A2Q14240 407 aaKnown RBP17.91■□□□□ 0.46
NECTIN1-203ENST00000341398 NLGN2Q8NFZ4 835 aa17.91■□□□□ 0.46
NECTIN1-203ENST00000341398 TOGARAM1Q9Y4F4 1720 aa17.9■□□□□ 0.46
NECTIN1-203ENST00000341398 LOC102724428A0A0B4J2F2 783 aa17.9■□□□□ 0.46
NECTIN1-203ENST00000341398 PHKG2P15735 406 aa17.9■□□□□ 0.46
NECTIN1-203ENST00000341398 SIK1P57059 783 aa17.9■□□□□ 0.46
NECTIN1-203ENST00000341398 CD2APQ9Y5K6 639 aa17.9■□□□□ 0.46
NECTIN1-203ENST00000341398 C4BP0C0L5 1744 aa17.9■□□□□ 0.46
NECTIN1-203ENST00000341398 PLEKHG2Q9H7P9 1386 aa17.89■□□□□ 0.45
NECTIN1-203ENST00000341398 HSP90AB1P08238 724 aaKnown RBP17.89■□□□□ 0.45
NECTIN1-203ENST00000341398 SSFA2P28290 1259 aa17.88■□□□□ 0.45
NECTIN1-203ENST00000341398 ATP6V1AP38606 617 aa17.88■□□□□ 0.45
NECTIN1-203ENST00000341398 PLEKHO1Q53GL0 409 aaPredicted RBP17.88■□□□□ 0.45
NECTIN1-203ENST00000341398 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.87■□□□□ 0.45
NECTIN1-203ENST00000341398 PHF14O94880 888 aa17.87■□□□□ 0.45
NECTIN1-203ENST00000341398 MORC1Q86VD1 984 aa17.87■□□□□ 0.45
NECTIN1-203ENST00000341398 ASAP1Q9ULH1 1129 aa17.87■□□□□ 0.45
NECTIN1-203ENST00000341398 UBR3Q6ZT12 1888 aa17.86■□□□□ 0.45
NECTIN1-203ENST00000341398 ERVV-2B6SEH9 535 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms