RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 TATP17735 454 aaPredicted RBP19.82■□□□□ 0.76
COMMD4-202ENST00000338995 GGNBP2Q9H3C7 697 aa19.82■□□□□ 0.76
COMMD4-202ENST00000338995 SMG6Q86US8 1419 aaKnown RBP19.82■□□□□ 0.76
COMMD4-202ENST00000338995 MAP3K5Q99683 1374 aa19.82■□□□□ 0.76
COMMD4-202ENST00000338995 MYOM1P52179 1685 aa19.81■□□□□ 0.76
COMMD4-202ENST00000338995 RRS1Q15050 365 aaKnown RBP19.81■□□□□ 0.76
COMMD4-202ENST00000338995 NBPF6Q5VWK0 638 aa19.81■□□□□ 0.76
COMMD4-202ENST00000338995 KLHL34Q8N239 644 aa19.81■□□□□ 0.76
COMMD4-202ENST00000338995 NBPF4Q96M43 638 aa19.81■□□□□ 0.76
COMMD4-202ENST00000338995 CCNL1Q9UK58 526 aaPredicted RBP19.81■□□□□ 0.76
COMMD4-202ENST00000338995 RTL1A6NKG5 1358 aa19.81■□□□□ 0.76
COMMD4-202ENST00000338995 ZNF784Q8NCA9 323 aaPredicted RBP19.8■□□□□ 0.76
COMMD4-202ENST00000338995 FAM208AQ9UK61 1670 aaKnown RBP19.8■□□□□ 0.76
COMMD4-202ENST00000338995 MSH5O43196 834 aa19.79■□□□□ 0.76
COMMD4-202ENST00000338995 USP47Q96K76 1375 aa19.79■□□□□ 0.76
COMMD4-202ENST00000338995 PNPLA7Q6ZV29 1317 aa19.77■□□□□ 0.76
COMMD4-202ENST00000338995 KCNQ4P56696 695 aa19.77■□□□□ 0.76
COMMD4-202ENST00000338995 TRIM26Q12899 539 aaPredicted RBP19.76■□□□□ 0.75
COMMD4-202ENST00000338995 HSP90AB2PQ58FF8 381 aa19.75■□□□□ 0.75
COMMD4-202ENST00000338995 PELP1Q8IZL8 1130 aaKnown RBP19.75■□□□□ 0.75
COMMD4-202ENST00000338995 USHBP1Q8N6Y0 703 aa19.75■□□□□ 0.75
COMMD4-202ENST00000338995 FLAD1Q8NFF5 587 aa19.75■□□□□ 0.75
COMMD4-202ENST00000338995 PAPPAQ13219 1627 aa19.75■□□□□ 0.75
COMMD4-202ENST00000338995 PCDH11XQ9BZA7 1347 aa19.75■□□□□ 0.75
COMMD4-202ENST00000338995 PCDH11YQ9BZA8 1340 aa19.75■□□□□ 0.75
COMMD4-202ENST00000338995 INSRP06213 1382 aa19.74■□□□□ 0.75
COMMD4-202ENST00000338995 KIF24Q5T7B8 1368 aa19.74■□□□□ 0.75
COMMD4-202ENST00000338995 FLT4P35916 1363 aa19.72■□□□□ 0.75
COMMD4-202ENST00000338995 SMARCC1Q92922 1105 aaPredicted RBP19.72■□□□□ 0.75
COMMD4-202ENST00000338995 TIMELESSQ9UNS1 1208 aa19.72■□□□□ 0.75
COMMD4-202ENST00000338995 MEGF6O75095 1541 aa19.71■□□□□ 0.75
COMMD4-202ENST00000338995 GRIN3BO60391 1043 aa19.71■□□□□ 0.75
COMMD4-202ENST00000338995 MPRIPQ6WCQ1 1025 aa19.71■□□□□ 0.75
COMMD4-202ENST00000338995 CHD4Q14839 1912 aa19.7■□□□□ 0.74
COMMD4-202ENST00000338995 PPM1GO15355 546 aaPredicted RBP19.7■□□□□ 0.74
COMMD4-202ENST00000338995 COL23A1Q86Y22 540 aaPredicted RBP19.7■□□□□ 0.74
COMMD4-202ENST00000338995 NSD2O96028 1365 aa19.7■□□□□ 0.74
COMMD4-202ENST00000338995 SPG7Q9UQ90 795 aa19.69■□□□□ 0.74
COMMD4-202ENST00000338995 QSER1Q2KHR3 1735 aa19.67■□□□□ 0.74
COMMD4-202ENST00000338995 RGPD2P0DJD1 1756 aa19.66■□□□□ 0.74
COMMD4-202ENST00000338995 CARD14Q9BXL6 1004 aa19.66■□□□□ 0.74
COMMD4-202ENST00000338995 DOT1LQ8TEK3 1739 aa19.65■□□□□ 0.74
COMMD4-202ENST00000338995 CYP27B1O15528 508 aa19.65■□□□□ 0.74
COMMD4-202ENST00000338995 C1QTNF8P60827 252 aa19.65■□□□□ 0.74
COMMD4-202ENST00000338995 AK7Q96M32 723 aa19.65■□□□□ 0.74
COMMD4-202ENST00000338995 EMILIN1Q9Y6C2 1016 aa19.65■□□□□ 0.74
COMMD4-202ENST00000338995 PALLDQ8WX93 1383 aa19.65■□□□□ 0.74
COMMD4-202ENST00000338995 LY75O60449 1722 aa19.65■□□□□ 0.74
COMMD4-202ENST00000338995 NLGN2Q8NFZ4 835 aa19.64■□□□□ 0.73
COMMD4-202ENST00000338995 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.64■□□□□ 0.73
COMMD4-202ENST00000338995 CD2APQ9Y5K6 639 aa19.64■□□□□ 0.73
COMMD4-202ENST00000338995 WASHC2AQ641Q2 1341 aa19.63■□□□□ 0.73
COMMD4-202ENST00000338995 NKX1-1Q15270 411 aaPredicted RBP19.63■□□□□ 0.73
COMMD4-202ENST00000338995 MSL1Q68DK7 614 aa19.63■□□□□ 0.73
COMMD4-202ENST00000338995 NSD3Q9BZ95 1437 aa19.61■□□□□ 0.73
COMMD4-202ENST00000338995 SENP3-EIF4A1A0A087X0R7 540 aa19.61■□□□□ 0.73
COMMD4-202ENST00000338995 GIGYF1O75420 1035 aaPredicted RBP19.61■□□□□ 0.73
COMMD4-202ENST00000338995 PIGBQ92521 554 aa19.61■□□□□ 0.73
COMMD4-202ENST00000338995 IFNL2Q8IZJ0 200 aa19.6■□□□□ 0.73
COMMD4-202ENST00000338995 POLR3GLQ9BT43 218 aa19.6■□□□□ 0.73
COMMD4-202ENST00000338995 TMOD3Q9NYL9 352 aa19.6■□□□□ 0.73
COMMD4-202ENST00000338995 EYA1Q99502 592 aa19.59■□□□□ 0.73
COMMD4-202ENST00000338995 SHANK3Q9BYB0 1731 aa19.59■□□□□ 0.73
COMMD4-202ENST00000338995 COL24A1Q17RW2 1714 aa19.58■□□□□ 0.72
COMMD4-202ENST00000338995 LOC102724428A0A0B4J2F2 783 aa19.57■□□□□ 0.72
COMMD4-202ENST00000338995 YBX3P16989 372 aaKnown RBP eCLIP19.57■□□□□ 0.72
COMMD4-202ENST00000338995 SIK1P57059 783 aa19.57■□□□□ 0.72
COMMD4-202ENST00000338995 POLKQ9UBT6 870 aa19.57■□□□□ 0.72
COMMD4-202ENST00000338995 KIF20BQ96Q89 1820 aa19.57■□□□□ 0.72
COMMD4-202ENST00000338995 CLSPNQ9HAW4 1339 aa19.56■□□□□ 0.72
COMMD4-202ENST00000338995 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.56■□□□□ 0.72
COMMD4-202ENST00000338995 PHF14O94880 888 aa19.56■□□□□ 0.72
COMMD4-202ENST00000338995 SSFA2P28290 1259 aa19.56■□□□□ 0.72
COMMD4-202ENST00000338995 TUBGCP6Q96RT7 1819 aa19.55■□□□□ 0.72
COMMD4-202ENST00000338995 UTRNP46939 3433 aa19.54■□□□□ 0.72
COMMD4-202ENST00000338995 HSP90AB1P08238 724 aaKnown RBP19.54■□□□□ 0.72
COMMD4-202ENST00000338995 PHKG2P15735 406 aa19.54■□□□□ 0.72
COMMD4-202ENST00000338995 ATP6V1AP38606 617 aa19.54■□□□□ 0.72
COMMD4-202ENST00000338995 PCGF6Q9BYE7 350 aa19.54■□□□□ 0.72
COMMD4-202ENST00000338995 TNNT2P45379 298 aaPredicted RBP19.53■□□□□ 0.72
COMMD4-202ENST00000338995 ASAP1Q9ULH1 1129 aa19.52■□□□□ 0.72
COMMD4-202ENST00000338995 NCAPD2Q15021 1401 aa19.51■□□□□ 0.71
COMMD4-202ENST00000338995 GNPATO15228 680 aa19.51■□□□□ 0.71
COMMD4-202ENST00000338995 EIF4G2P78344 907 aaKnown RBP eCLIP19.51■□□□□ 0.71
COMMD4-202ENST00000338995 EIF4A2Q14240 407 aaKnown RBP19.51■□□□□ 0.71
COMMD4-202ENST00000338995 PLEKHO1Q53GL0 409 aaPredicted RBP19.51■□□□□ 0.71
COMMD4-202ENST00000338995 C5P01031 1676 aa19.51■□□□□ 0.71
COMMD4-202ENST00000338995 ERVV-2B6SEH9 535 aa19.5■□□□□ 0.71
COMMD4-202ENST00000338995 LINC00116Q8NCU8 138 aa19.5■□□□□ 0.71
COMMD4-202ENST00000338995 MAP2P11137 1827 aaKnown RBP19.49■□□□□ 0.71
COMMD4-202ENST00000338995 PLEKHG2Q9H7P9 1386 aa19.49■□□□□ 0.71
COMMD4-202ENST00000338995 AMOTQ4VCS5 1084 aa19.49■□□□□ 0.71
COMMD4-202ENST00000338995 TRAPPC3LQ5T215 181 aa19.49■□□□□ 0.71
COMMD4-202ENST00000338995 GPBP1L1Q9HC44 474 aaPredicted RBP19.49■□□□□ 0.71
COMMD4-202ENST00000338995 ATG3Q9NT62 314 aa19.49■□□□□ 0.71
COMMD4-202ENST00000338995 DCAF5Q96JK2 942 aa19.48■□□□□ 0.71
COMMD4-202ENST00000338995 PANK3Q9H999 370 aa19.48■□□□□ 0.71
COMMD4-202ENST00000338995 RTCBQ9Y3I0 505 aaKnown RBP19.48■□□□□ 0.71
COMMD4-202ENST00000338995 ITGB4P16144 1822 aa19.48■□□□□ 0.71
COMMD4-202ENST00000338995 C4BP0C0L5 1744 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 285.9 ms