RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 CDC14CA4D256 554 aa6.91□□□□□ -1.3
XRCC4-202ENST00000338635 AP1G2O75843 785 aa6.91□□□□□ -1.3
XRCC4-202ENST00000338635 PPP2R2DQ66LE6 453 aa6.91□□□□□ -1.3
XRCC4-202ENST00000338635 TMPRSS4Q9NRS4 437 aa6.91□□□□□ -1.3
XRCC4-202ENST00000338635 SH3D19Q5HYK7 790 aa6.9□□□□□ -1.31
XRCC4-202ENST00000338635 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.9□□□□□ -1.31
XRCC4-202ENST00000338635 RAB15P59190 212 aa6.89□□□□□ -1.31
XRCC4-202ENST00000338635 SRSF11Q05519 484 aaKnown RBP6.89□□□□□ -1.31
XRCC4-202ENST00000338635 PODNQ7Z5L7 613 aa6.89□□□□□ -1.31
XRCC4-202ENST00000338635 EPS8L1Q8TE68 723 aa6.89□□□□□ -1.31
XRCC4-202ENST00000338635 ADD1P35611 737 aaKnown RBP6.88□□□□□ -1.31
XRCC4-202ENST00000338635 NBPF20Q3BBV1 942 aa6.88□□□□□ -1.31
XRCC4-202ENST00000338635 ZNF784Q8NCA9 323 aaPredicted RBP6.88□□□□□ -1.31
XRCC4-202ENST00000338635 RNF217Q8TC41 542 aa6.88□□□□□ -1.31
XRCC4-202ENST00000338635 SENP3-EIF4A1A0A087X0R7 540 aa6.87□□□□□ -1.31
XRCC4-202ENST00000338635 DZIP3Q86Y13 1208 aaKnown RBP6.87□□□□□ -1.31
XRCC4-202ENST00000338635 PNMA1Q8ND90 353 aa6.87□□□□□ -1.31
XRCC4-202ENST00000338635 FAM117AQ9C073 453 aa6.87□□□□□ -1.31
XRCC4-202ENST00000338635 KDM4CQ9H3R0 1056 aa6.87□□□□□ -1.31
XRCC4-202ENST00000338635 GPBP1L1Q9HC44 474 aaPredicted RBP6.87□□□□□ -1.31
XRCC4-202ENST00000338635 ERVH48-1M5A8F1 160 aa6.86□□□□□ -1.31
XRCC4-202ENST00000338635 LILRA1O75019 489 aa6.86□□□□□ -1.31
XRCC4-202ENST00000338635 ADH1AP07327 375 aa6.86□□□□□ -1.31
XRCC4-202ENST00000338635 PTGIRP43119 386 aa6.86□□□□□ -1.31
XRCC4-202ENST00000338635 DDRGK1Q96HY6 314 aa6.86□□□□□ -1.31
XRCC4-202ENST00000338635 KDF1Q8NAX2 398 aaPredicted RBP6.86□□□□□ -1.31
XRCC4-202ENST00000338635 FOXD4L5Q5VV16 416 aaPredicted RBP6.85□□□□□ -1.31
XRCC4-202ENST00000338635 HMX1Q9NP08 348 aaPredicted RBP6.85□□□□□ -1.31
XRCC4-202ENST00000338635 ESPNB1AK53 854 aa6.84□□□□□ -1.31
XRCC4-202ENST00000338635 LYSMD3Q7Z3D4 306 aa6.84□□□□□ -1.31
XRCC4-202ENST00000338635 USP17L8P0C7I0 530 aa6.83□□□□□ -1.32
XRCC4-202ENST00000338635 NEDD1Q8NHV4 660 aa6.83□□□□□ -1.32
XRCC4-202ENST00000338635 CUEDC1Q9NWM3 386 aaPredicted RBP6.83□□□□□ -1.32
XRCC4-202ENST00000338635 PRICKLE2Q7Z3G6 844 aa6.82□□□□□ -1.32
XRCC4-202ENST00000338635 KRBA1A5PL33 1030 aa6.82□□□□□ -1.32
XRCC4-202ENST00000338635 RNF144AP50876 292 aaPredicted RBP6.82□□□□□ -1.32
XRCC4-202ENST00000338635 CYLDQ9NQC7 956 aa6.82□□□□□ -1.32
XRCC4-202ENST00000338635 RHOQP17081 205 aa6.81□□□□□ -1.32
XRCC4-202ENST00000338635 SEPT12Q8IYM1 358 aa6.81□□□□□ -1.32
XRCC4-202ENST00000338635 RFC5P40937 340 aa6.8□□□□□ -1.32
XRCC4-202ENST00000338635 GAS6Q14393 721 aa6.8□□□□□ -1.32
XRCC4-202ENST00000338635 TRIM52Q96A61 297 aa6.8□□□□□ -1.32
XRCC4-202ENST00000338635 ATP5J2-PTCD1G3V325 749 aa6.78□□□□□ -1.32
XRCC4-202ENST00000338635 GIGYF1O75420 1035 aaPredicted RBP6.78□□□□□ -1.32
XRCC4-202ENST00000338635 BCRP11274 1271 aa6.78□□□□□ -1.32
XRCC4-202ENST00000338635 TRIM34Q9BYJ4 488 aa6.78□□□□□ -1.32
XRCC4-202ENST00000338635 MEN1O00255 615 aa6.78□□□□□ -1.32
XRCC4-202ENST00000338635 KRTAP19-1Q8IUB9 90 aa6.78□□□□□ -1.32
XRCC4-202ENST00000338635 TRIM22Q8IYM9 498 aa6.78□□□□□ -1.32
XRCC4-202ENST00000338635 GMCL1Q96IK5 515 aa6.78□□□□□ -1.32
XRCC4-202ENST00000338635 PCDHB9Q9Y5E1 797 aa6.78□□□□□ -1.32
XRCC4-202ENST00000338635 A0A1W2PRU2 124 aa6.77□□□□□ -1.33
XRCC4-202ENST00000338635 DBN1Q16643 649 aa6.77□□□□□ -1.33
XRCC4-202ENST00000338635 FOXR1Q6PIV2 292 aa6.77□□□□□ -1.33
XRCC4-202ENST00000338635 RIPOR1Q6ZS17 1223 aa6.77□□□□□ -1.33
XRCC4-202ENST00000338635 ZNF837Q96EG3 531 aaPredicted RBP6.77□□□□□ -1.33
XRCC4-202ENST00000338635 ZBBXA8MT70 800 aa6.76□□□□□ -1.33
XRCC4-202ENST00000338635 GPR25O00155 361 aa6.76□□□□□ -1.33
XRCC4-202ENST00000338635 GPC1P35052 558 aa6.76□□□□□ -1.33
XRCC4-202ENST00000338635 TMEM259Q4ZIN3 620 aa6.76□□□□□ -1.33
XRCC4-202ENST00000338635 ZMYM1Q5SVZ6 1142 aa6.76□□□□□ -1.33
XRCC4-202ENST00000338635 MBIPQ9NS73 344 aa6.76□□□□□ -1.33
XRCC4-202ENST00000338635 ITGB7P26010 798 aa6.75□□□□□ -1.33
XRCC4-202ENST00000338635 POU4F2Q12837 409 aa6.75□□□□□ -1.33
XRCC4-202ENST00000338635 ALYREFQ86V81 257 aaKnown RBP6.74□□□□□ -1.33
XRCC4-202ENST00000338635 NLRP3Q96P20 1036 aa6.74□□□□□ -1.33
XRCC4-202ENST00000338635 GAS2L1Q99501 681 aaPredicted RBP6.74□□□□□ -1.33
XRCC4-202ENST00000338635 DYRK1BQ9Y463 629 aa6.74□□□□□ -1.33
XRCC4-202ENST00000338635 IGF1RP08069 1367 aa6.74□□□□□ -1.33
XRCC4-202ENST00000338635 FBXO45P0C2W1 286 aa6.74□□□□□ -1.33
XRCC4-202ENST00000338635 SLC27A3Q5K4L6 730 aa6.74□□□□□ -1.33
XRCC4-202ENST00000338635 CC2D2BQ6DHV5 1058 aa6.74□□□□□ -1.33
XRCC4-202ENST00000338635 CCDC125Q86Z20 511 aa6.74□□□□□ -1.33
XRCC4-202ENST00000338635 GTPBP3Q969Y2 492 aaKnown RBP6.74□□□□□ -1.33
XRCC4-202ENST00000338635 PCMTD1Q96MG8 357 aaPredicted RBP6.74□□□□□ -1.33
XRCC4-202ENST00000338635 H7C1W4 665 aa6.73□□□□□ -1.33
XRCC4-202ENST00000338635 ERVK-9P63128 1117 aa6.73□□□□□ -1.33
XRCC4-202ENST00000338635 RNF20Q5VTR2 975 aa6.73□□□□□ -1.33
XRCC4-202ENST00000338635 GRIP2Q9C0E4 1043 aa6.73□□□□□ -1.33
XRCC4-202ENST00000338635 GOLGA2P5Q9HBQ8 144 aa6.73□□□□□ -1.33
XRCC4-202ENST00000338635 GOPCQ9HD26 462 aa6.72□□□□□ -1.33
XRCC4-202ENST00000338635 NBPF10Q6P3W6 841 aaKnown RBP6.71□□□□□ -1.34
XRCC4-202ENST00000338635 NBPF15Q8N660 670 aa6.71□□□□□ -1.34
XRCC4-202ENST00000338635 ACDQ96AP0 544 aa6.71□□□□□ -1.34
XRCC4-202ENST00000338635 GJD4Q96KN9 370 aaPredicted RBP6.71□□□□□ -1.34
XRCC4-202ENST00000338635 TRERF1Q96PN7 1200 aa6.71□□□□□ -1.34
XRCC4-202ENST00000338635 SEMA6BQ9H3T3 888 aa6.71□□□□□ -1.34
XRCC4-202ENST00000338635 MCCD1P59942 119 aaPredicted RBP6.7□□□□□ -1.34
XRCC4-202ENST00000338635 CYP2U1Q7Z449 544 aa6.7□□□□□ -1.34
XRCC4-202ENST00000338635 KRTAP4-7Q9BYR0 210 aa6.7□□□□□ -1.34
XRCC4-202ENST00000338635 ESF1Q9H501 851 aaKnown RBP6.7□□□□□ -1.34
XRCC4-202ENST00000338635 LRRC4BQ9NT99 713 aa6.7□□□□□ -1.34
XRCC4-202ENST00000338635 SCTRP47872 440 aa6.69□□□□□ -1.34
XRCC4-202ENST00000338635 SNRPNP63162 240 aaKnown RBP6.69□□□□□ -1.34
XRCC4-202ENST00000338635 CLN3Q13286 438 aa6.69□□□□□ -1.34
XRCC4-202ENST00000338635 TIMMDC1Q9NPL8 285 aa6.69□□□□□ -1.34
XRCC4-202ENST00000338635 SCO2A0A1W2PP80 73 aa6.69□□□□□ -1.34
XRCC4-202ENST00000338635 SPATA31C2B4DYI2 1134 aa6.69□□□□□ -1.34
XRCC4-202ENST00000338635 MX2P20592 715 aa6.69□□□□□ -1.34
XRCC4-202ENST00000338635 COL8A1P27658 744 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 220 ms