RNA–Protein interactions for RNA: ENST00000334409.9

PDCD1-201, Transcript of programmed cell death 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD1, Length 2,114 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1-201ENST00000334409 PRDM11Q9NQV5 511 aa21.56■■□□□ 1.04
PDCD1-201ENST00000334409 C20orf194Q5TEA3 1177 aa21.55■■□□□ 1.04
PDCD1-201ENST00000334409 NBPF6Q5VWK0 638 aa21.55■■□□□ 1.04
PDCD1-201ENST00000334409 NBPF4Q96M43 638 aa21.55■■□□□ 1.04
PDCD1-201ENST00000334409 CENPQQ7L2Z9 268 aaPredicted RBP21.55■■□□□ 1.04
PDCD1-201ENST00000334409 NGEFQ8N5V2 710 aa21.54■■□□□ 1.04
PDCD1-201ENST00000334409 VSIG10Q8N0Z9 540 aa21.53■■□□□ 1.04
PDCD1-201ENST00000334409 COL16A1Q07092 1604 aaPredicted RBP21.53■■□□□ 1.04
PDCD1-201ENST00000334409 IQSEC2Q5JU85 1478 aa21.53■■□□□ 1.04
PDCD1-201ENST00000334409 RGPD2P0DJD1 1756 aa21.53■■□□□ 1.04
PDCD1-201ENST00000334409 NUTM2BA6NNL0 878 aaPredicted RBP21.52■■□□□ 1.04
PDCD1-201ENST00000334409 NUTM2EB1AL46 878 aaPredicted RBP21.52■■□□□ 1.04
PDCD1-201ENST00000334409 HSP90AA2PQ14568 343 aaPredicted RBP21.52■■□□□ 1.04
PDCD1-201ENST00000334409 NUTM2AQ8IVF1 878 aaPredicted RBP21.52■■□□□ 1.04
PDCD1-201ENST00000334409 IGSF1Q8N6C5 1336 aa21.52■■□□□ 1.04
PDCD1-201ENST00000334409 RGPD1P0DJD0 1748 aa21.52■■□□□ 1.04
PDCD1-201ENST00000334409 FAM83GA6ND36 823 aa21.52■■□□□ 1.03
PDCD1-201ENST00000334409 TMPOP42166 694 aaKnown RBP21.52■■□□□ 1.03
PDCD1-201ENST00000334409 ABCA3Q99758 1704 aa21.51■■□□□ 1.03
PDCD1-201ENST00000334409 PNNQ9H307 717 aaKnown RBP21.51■■□□□ 1.03
PDCD1-201ENST00000334409 RRAGDQ9NQL2 400 aaPredicted RBP21.51■■□□□ 1.03
PDCD1-201ENST00000334409 HSP90AA1P07900 732 aaKnown RBP21.5■■□□□ 1.03
PDCD1-201ENST00000334409 CSB-PGBD3P0DP91 1061 aa21.5■■□□□ 1.03
PDCD1-201ENST00000334409 ADAMTS2O95450 1211 aa21.5■■□□□ 1.03
PDCD1-201ENST00000334409 RIPK4P57078 832 aa21.5■■□□□ 1.03
PDCD1-201ENST00000334409 CPDO75976 1380 aa21.5■■□□□ 1.03
PDCD1-201ENST00000334409 COL18A1P39060 1754 aa21.49■■□□□ 1.03
PDCD1-201ENST00000334409 ERBB3P21860 1342 aa21.49■■□□□ 1.03
PDCD1-201ENST00000334409 WWC1Q8IX03 1113 aa21.49■■□□□ 1.03
PDCD1-201ENST00000334409 NLRP2Q9NX02 1062 aa21.48■■□□□ 1.03
PDCD1-201ENST00000334409 CLCN1P35523 988 aa21.47■■□□□ 1.03
PDCD1-201ENST00000334409 SLC4A3P48751 1232 aa21.47■■□□□ 1.03
PDCD1-201ENST00000334409 SPINK5Q9NQ38 1064 aaPredicted RBP21.47■■□□□ 1.03
PDCD1-201ENST00000334409 STRN4Q9NRL3 753 aa21.47■■□□□ 1.03
PDCD1-201ENST00000334409 E9PSI1 815 aa21.46■■□□□ 1.03
PDCD1-201ENST00000334409 HSPA1LP34931 641 aa21.46■■□□□ 1.03
PDCD1-201ENST00000334409 TRIM35Q9UPQ4 493 aa21.46■■□□□ 1.03
PDCD1-201ENST00000334409 CAMTA1Q9Y6Y1 1673 aa21.45■■□□□ 1.02
PDCD1-201ENST00000334409 NFE2L2Q16236 605 aa21.45■■□□□ 1.02
PDCD1-201ENST00000334409 C8orf34Q49A92 452 aa21.45■■□□□ 1.02
PDCD1-201ENST00000334409 KDRP35968 1356 aa21.45■■□□□ 1.02
PDCD1-201ENST00000334409 THUMPD2Q9BTF0 503 aaKnown RBP21.44■■□□□ 1.02
PDCD1-201ENST00000334409 MTHFSDQ2M296 383 aaKnown RBP21.43■■□□□ 1.02
PDCD1-201ENST00000334409 BTG4Q9NY30 223 aa21.43■■□□□ 1.02
PDCD1-201ENST00000334409 DCTN1Q14203 1278 aa21.43■■□□□ 1.02
PDCD1-201ENST00000334409 EVA1CP58658 441 aa21.42■■□□□ 1.02
PDCD1-201ENST00000334409 COL22A1Q8NFW1 1626 aaPredicted RBP21.42■■□□□ 1.02
PDCD1-201ENST00000334409 NAP1L5Q96NT1 182 aaPredicted RBP21.42■■□□□ 1.02
PDCD1-201ENST00000334409 SKAP1Q86WV1 359 aa21.41■■□□□ 1.02
PDCD1-201ENST00000334409 LARP1Q6PKG0 1096 aaKnown RBP21.4■■□□□ 1.02
PDCD1-201ENST00000334409 TOM1L2Q6ZVM7 507 aa21.4■■□□□ 1.02
PDCD1-201ENST00000334409 PHF23Q9BUL5 403 aaPredicted RBP21.4■■□□□ 1.02
PDCD1-201ENST00000334409 VIRMAQ69YN4 1812 aaKnown RBP21.4■■□□□ 1.02
PDCD1-201ENST00000334409 BECN1Q14457 450 aa21.39■■□□□ 1.01
PDCD1-201ENST00000334409 CCDC27Q2M243 656 aa21.39■■□□□ 1.01
PDCD1-201ENST00000334409 LMO7Q8WWI1 1683 aa21.39■■□□□ 1.01
PDCD1-201ENST00000334409 DLG5Q8TDM6 1919 aa21.38■■□□□ 1.01
PDCD1-201ENST00000334409 COL5A2P05997 1499 aaPredicted RBP21.38■■□□□ 1.01
PDCD1-201ENST00000334409 MCM10Q7L590 875 aa21.37■■□□□ 1.01
PDCD1-201ENST00000334409 JCADQ9P266 1359 aa21.37■■□□□ 1.01
PDCD1-201ENST00000334409 WDR17Q8IZU2 1322 aa21.37■■□□□ 1.01
PDCD1-201ENST00000334409 PDE3AQ14432 1141 aa21.35■■□□□ 1.01
PDCD1-201ENST00000334409 WDR63Q8IWG1 891 aa21.35■■□□□ 1.01
PDCD1-201ENST00000334409 ABCC6O95255 1503 aa21.34■■□□□ 1.01
PDCD1-201ENST00000334409 RAPGEF4Q8WZA2 1011 aa21.34■■□□□ 1.01
PDCD1-201ENST00000334409 TSR2Q969E8 191 aaKnown RBP21.34■■□□□ 1.01
PDCD1-201ENST00000334409 BCAR3O75815 825 aa21.33■■□□□ 1.01
PDCD1-201ENST00000334409 GAS2L2Q8NHY3 880 aa21.33■■□□□ 1.01
PDCD1-201ENST00000334409 C8orf37Q96NL8 207 aa21.33■■□□□ 1.01
PDCD1-201ENST00000334409 GOLGA6L3A6NEY3 463 aa21.32■■□□□ 1
PDCD1-201ENST00000334409 NCAPD2Q15021 1401 aa21.32■■□□□ 1
PDCD1-201ENST00000334409 COL14A1Q05707 1796 aaKnown RBP21.31■■□□□ 1
PDCD1-201ENST00000334409 FSD2A1L4K1 749 aa21.31■■□□□ 1
PDCD1-201ENST00000334409 FAM208AQ9UK61 1670 aaKnown RBP21.31■■□□□ 1
PDCD1-201ENST00000334409 PLEKHO1Q53GL0 409 aaPredicted RBP21.31■■□□□ 1
PDCD1-201ENST00000334409 ZNF530Q6P9A1 599 aaPredicted RBP21.31■■□□□ 1
PDCD1-201ENST00000334409 MEGF6O75095 1541 aa21.3■■□□□ 1
PDCD1-201ENST00000334409 TATP17735 454 aaPredicted RBP21.3■■□□□ 1
PDCD1-201ENST00000334409 NCBP3Q53F19 620 aaKnown RBP21.3■■□□□ 1
PDCD1-201ENST00000334409 RTF1Q92541 710 aaKnown RBP21.3■■□□□ 1
PDCD1-201ENST00000334409 CARD10Q9BWT7 1032 aa21.29■■□□□ 1
PDCD1-201ENST00000334409 GNAT3A8MTJ3 354 aa21.29■■□□□ 1
PDCD1-201ENST00000334409 LMOD3Q0VAK6 560 aa21.29■■□□□ 1
PDCD1-201ENST00000334409 NGLY1Q96IV0 654 aa21.29■■□□□ 1
PDCD1-201ENST00000334409 ISY1Q9ULR0 285 aaKnown RBP21.29■■□□□ 1
PDCD1-201ENST00000334409 TPM2P07951 284 aa21.28■■□□□ 1
PDCD1-201ENST00000334409 MIS18AQ9NYP9 233 aa21.27■■□□□ 1
PDCD1-201ENST00000334409 PODXL2Q9NZ53 605 aa21.27■■□□□ 1
PDCD1-201ENST00000334409 LRP6O75581 1613 aa21.27■■□□□ 1
PDCD1-201ENST00000334409 PLCH1Q4KWH8 1693 aa21.26■□□□□ 0.99
PDCD1-201ENST00000334409 AAMPQ13685 434 aa21.26■□□□□ 0.99
PDCD1-201ENST00000334409 MPRIPQ6WCQ1 1025 aa21.26■□□□□ 0.99
PDCD1-201ENST00000334409 IL17REQ8NFR9 667 aa21.26■□□□□ 0.99
PDCD1-201ENST00000334409 LGR6Q9HBX8 967 aa21.26■□□□□ 0.99
PDCD1-201ENST00000334409 CRB1P82279 1406 aa21.26■□□□□ 0.99
PDCD1-201ENST00000334409 MAP3K5Q99683 1374 aa21.26■□□□□ 0.99
PDCD1-201ENST00000334409 AMOTQ4VCS5 1084 aa21.26■□□□□ 0.99
PDCD1-201ENST00000334409 XRCC6P12956 609 aaKnown RBP eCLIP21.25■□□□□ 0.99
PDCD1-201ENST00000334409 MYH16Q9H6N6 1097 aa21.25■□□□□ 0.99
PDCD1-201ENST00000334409 CCDC9Q9Y3X0 531 aaKnown RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms