RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 RRS1Q15050 365 aaKnown RBP13.22□□□□□ -0.29
SYN3-201ENST00000332840 LTV1Q96GA3 475 aaPredicted RBP13.21□□□□□ -0.29
SYN3-201ENST00000332840 KNSTRNQ9Y448 316 aa13.21□□□□□ -0.29
SYN3-201ENST00000332840 CASZ1Q86V15 1759 aa13.2□□□□□ -0.3
SYN3-201ENST00000332840 CCER2I3L3R5 266 aa13.2□□□□□ -0.3
SYN3-201ENST00000332840 LRRC37A3O60309 1634 aa13.2□□□□□ -0.3
SYN3-201ENST00000332840 FAM208AQ9UK61 1670 aaKnown RBP13.19□□□□□ -0.3
SYN3-201ENST00000332840 MARCH10Q8NA82 808 aaPredicted RBP13.19□□□□□ -0.3
SYN3-201ENST00000332840 PEAK1Q9H792 1746 aa13.19□□□□□ -0.3
SYN3-201ENST00000332840 LTN1O94822 1766 aa13.18□□□□□ -0.3
SYN3-201ENST00000332840 FBLN1P23142 703 aa13.18□□□□□ -0.3
SYN3-201ENST00000332840 NBPF14Q5TI25 921 aa13.18□□□□□ -0.3
SYN3-201ENST00000332840 RAPGEF4Q8WZA2 1011 aa13.18□□□□□ -0.3
SYN3-201ENST00000332840 BCL11BQ9C0K0 894 aaPredicted RBP13.18□□□□□ -0.3
SYN3-201ENST00000332840 PPM1GO15355 546 aaPredicted RBP13.17□□□□□ -0.3
SYN3-201ENST00000332840 HSP90AB2PQ58FF8 381 aa13.17□□□□□ -0.3
SYN3-201ENST00000332840 EMILIN1Q9Y6C2 1016 aa13.17□□□□□ -0.3
SYN3-201ENST00000332840 KIF20BQ96Q89 1820 aa13.17□□□□□ -0.3
SYN3-201ENST00000332840 RGPD3A6NKT7 1758 aaPredicted RBP13.17□□□□□ -0.3
SYN3-201ENST00000332840 RGPD4Q7Z3J3 1758 aa13.17□□□□□ -0.3
SYN3-201ENST00000332840 MORC1Q86VD1 984 aa13.16□□□□□ -0.3
SYN3-201ENST00000332840 SPON1Q9HCB6 807 aa13.16□□□□□ -0.3
SYN3-201ENST00000332840 KCNQ2O43526 872 aa13.15□□□□□ -0.3
SYN3-201ENST00000332840 NBPF6Q5VWK0 638 aa13.15□□□□□ -0.3
SYN3-201ENST00000332840 NBPF4Q96M43 638 aa13.15□□□□□ -0.3
SYN3-201ENST00000332840 PDGFDQ9GZP0 370 aaPredicted RBP13.15□□□□□ -0.3
SYN3-201ENST00000332840 POLKQ9UBT6 870 aa13.15□□□□□ -0.3
SYN3-201ENST00000332840 UTRNP46939 3433 aa13.14□□□□□ -0.31
SYN3-201ENST00000332840 PLSCR1O15162 318 aa13.14□□□□□ -0.31
SYN3-201ENST00000332840 PTF1AQ7RTS3 328 aa13.14□□□□□ -0.31
SYN3-201ENST00000332840 ZCRB1Q8TBF4 217 aaKnown RBP13.14□□□□□ -0.31
SYN3-201ENST00000332840 PLEKHG2Q9H7P9 1386 aa13.14□□□□□ -0.31
SYN3-201ENST00000332840 TATP17735 454 aaPredicted RBP13.13□□□□□ -0.31
SYN3-201ENST00000332840 TNNT2P45379 298 aaPredicted RBP13.13□□□□□ -0.31
SYN3-201ENST00000332840 AMER1Q5JTC6 1135 aaPredicted RBP13.13□□□□□ -0.31
SYN3-201ENST00000332840 PRKRIP1Q9H875 184 aaPredicted RBP13.13□□□□□ -0.31
SYN3-201ENST00000332840 ANO8Q9HCE9 1232 aaPredicted RBP13.13□□□□□ -0.31
SYN3-201ENST00000332840 NPC1L1Q9UHC9 1359 aa13.12□□□□□ -0.31
SYN3-201ENST00000332840 ZBTB7AO95365 584 aa13.12□□□□□ -0.31
SYN3-201ENST00000332840 SPINK5Q9NQ38 1064 aaPredicted RBP13.12□□□□□ -0.31
SYN3-201ENST00000332840 PCDH11XQ9BZA7 1347 aa13.12□□□□□ -0.31
SYN3-201ENST00000332840 PCDH11YQ9BZA8 1340 aa13.12□□□□□ -0.31
SYN3-201ENST00000332840 CAPN15O75808 1086 aa13.11□□□□□ -0.31
SYN3-201ENST00000332840 DDX54Q8TDD1 881 aaKnown RBP13.11□□□□□ -0.31
SYN3-201ENST00000332840 MEGF6O75095 1541 aa13.11□□□□□ -0.31
SYN3-201ENST00000332840 NCAPD2Q15021 1401 aa13.11□□□□□ -0.31
SYN3-201ENST00000332840 USHBP1Q8N6Y0 703 aa13.1□□□□□ -0.31
SYN3-201ENST00000332840 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.1□□□□□ -0.31
SYN3-201ENST00000332840 ATF5Q9Y2D1 282 aaPredicted RBP13.1□□□□□ -0.31
SYN3-201ENST00000332840 ANKRD26Q9UPS8 1709 aa13.1□□□□□ -0.31
SYN3-201ENST00000332840 PER1O15534 1290 aaPredicted RBP13.09□□□□□ -0.31
SYN3-201ENST00000332840 CENPBP07199 599 aaPredicted RBP13.09□□□□□ -0.31
SYN3-201ENST00000332840 EIF4A2Q14240 407 aaKnown RBP13.09□□□□□ -0.31
SYN3-201ENST00000332840 SPG7Q9UQ90 795 aa13.09□□□□□ -0.31
SYN3-201ENST00000332840 HMGB2P26583 209 aaKnown RBP13.08□□□□□ -0.32
SYN3-201ENST00000332840 EYA1Q99502 592 aa13.08□□□□□ -0.32
SYN3-201ENST00000332840 BTAF1O14981 1849 aa13.07□□□□□ -0.32
SYN3-201ENST00000332840 ACSBG1Q96GR2 724 aa13.07□□□□□ -0.32
SYN3-201ENST00000332840 YTHDC1Q96MU7 727 aaKnown RBP13.07□□□□□ -0.32
SYN3-201ENST00000332840 IGSF1Q8N6C5 1336 aa13.07□□□□□ -0.32
SYN3-201ENST00000332840 TUBGCP6Q96RT7 1819 aa13.06□□□□□ -0.32
SYN3-201ENST00000332840 RALBP1Q15311 655 aa13.06□□□□□ -0.32
SYN3-201ENST00000332840 TXNRD1Q16881 649 aa13.06□□□□□ -0.32
SYN3-201ENST00000332840 SAMD1Q6SPF0 538 aaPredicted RBP13.06□□□□□ -0.32
SYN3-201ENST00000332840 DSG3P32926 999 aa13.05□□□□□ -0.32
SYN3-201ENST00000332840 CC2D1BQ5T0F9 858 aaKnown RBP13.05□□□□□ -0.32
SYN3-201ENST00000332840 ZNF784Q8NCA9 323 aaPredicted RBP13.05□□□□□ -0.32
SYN3-201ENST00000332840 SYTL4Q96C24 671 aaPredicted RBP13.05□□□□□ -0.32
SYN3-201ENST00000332840 NHSQ6T4R5 1651 aa13.05□□□□□ -0.32
SYN3-201ENST00000332840 SENP3-EIF4A1A0A087X0R7 540 aa13.04□□□□□ -0.32
SYN3-201ENST00000332840 PRIM1P49642 420 aaKnown RBP13.04□□□□□ -0.32
SYN3-201ENST00000332840 SLC27A3Q5K4L6 730 aa13.04□□□□□ -0.32
SYN3-201ENST00000332840 PROM2Q8N271 834 aa13.04□□□□□ -0.32
SYN3-201ENST00000332840 MTHFSP49914 203 aa13.03□□□□□ -0.32
SYN3-201ENST00000332840 AMOTQ4VCS5 1084 aa13.03□□□□□ -0.32
SYN3-201ENST00000332840 IFNL2Q8IZJ0 200 aa13.03□□□□□ -0.32
SYN3-201ENST00000332840 FHDC1Q9C0D6 1143 aaPredicted RBP13.03□□□□□ -0.32
SYN3-201ENST00000332840 GOLGB1Q14789 3259 aaKnown RBP13.03□□□□□ -0.32
SYN3-201ENST00000332840 CYP27B1O15528 508 aa13.02□□□□□ -0.33
SYN3-201ENST00000332840 HSP90AB1P08238 724 aaKnown RBP13.02□□□□□ -0.33
SYN3-201ENST00000332840 PTGER2P43116 358 aa13.02□□□□□ -0.33
SYN3-201ENST00000332840 NKX1-1Q15270 411 aaPredicted RBP13.02□□□□□ -0.33
SYN3-201ENST00000332840 STK32BQ9NY57 414 aa13.02□□□□□ -0.33
SYN3-201ENST00000332840 IL13P35225 146 aa13.01□□□□□ -0.33
SYN3-201ENST00000332840 PLEKHO1Q53GL0 409 aaPredicted RBP13.01□□□□□ -0.33
SYN3-201ENST00000332840 MYBBP1AQ9BQG0 1328 aaKnown RBP13.01□□□□□ -0.33
SYN3-201ENST00000332840 KDRP35968 1356 aa13.01□□□□□ -0.33
SYN3-201ENST00000332840 DIAPH1O60610 1272 aaKnown RBP13□□□□□ -0.33
SYN3-201ENST00000332840 CNGB1Q14028 1251 aaPredicted RBP13□□□□□ -0.33
SYN3-201ENST00000332840 KLHL34Q8N239 644 aa13□□□□□ -0.33
SYN3-201ENST00000332840 SMARCC1Q92922 1105 aaPredicted RBP13□□□□□ -0.33
SYN3-201ENST00000332840 CFAP53Q96M91 514 aa13□□□□□ -0.33
SYN3-201ENST00000332840 SYT17Q9BSW7 474 aa13□□□□□ -0.33
SYN3-201ENST00000332840 MRS2Q9HD23 443 aa13□□□□□ -0.33
SYN3-201ENST00000332840 ZNF219Q9P2Y4 722 aaPredicted RBP13□□□□□ -0.33
SYN3-201ENST00000332840 RGPD2P0DJD1 1756 aa12.99□□□□□ -0.33
SYN3-201ENST00000332840 MYCNP04198 464 aaPredicted RBP12.99□□□□□ -0.33
SYN3-201ENST00000332840 PHKG2P15735 406 aa12.99□□□□□ -0.33
SYN3-201ENST00000332840 SLC15A2Q16348 729 aa12.99□□□□□ -0.33
SYN3-201ENST00000332840 SULT6B1Q6IMI4 303 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms