RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 CEP57L1Q8IYX8 460 aa22.37■■□□□ 1.17
NPLOC4-201ENST00000331134 PLEKHH1Q9ULM0 1364 aa22.37■■□□□ 1.17
NPLOC4-201ENST00000331134 PRIM1P49642 420 aaKnown RBP22.37■■□□□ 1.17
NPLOC4-201ENST00000331134 TTC12Q9H892 705 aaPredicted RBP22.37■■□□□ 1.17
NPLOC4-201ENST00000331134 PTPN14Q15678 1187 aa22.36■■□□□ 1.17
NPLOC4-201ENST00000331134 UBXN4Q92575 508 aa22.36■■□□□ 1.17
NPLOC4-201ENST00000331134 CWC15Q9P013 229 aaKnown RBP22.36■■□□□ 1.17
NPLOC4-201ENST00000331134 TNNT1P13805 278 aa22.36■■□□□ 1.17
NPLOC4-201ENST00000331134 GUCY1B3Q02153 619 aa22.35■■□□□ 1.17
NPLOC4-201ENST00000331134 GIMAP6Q6P9H5 292 aa22.35■■□□□ 1.17
NPLOC4-201ENST00000331134 FAM83GA6ND36 823 aa22.35■■□□□ 1.17
NPLOC4-201ENST00000331134 PPP6R1Q9UPN7 881 aa22.34■■□□□ 1.17
NPLOC4-201ENST00000331134 FAM177BA6PVY3 158 aa22.34■■□□□ 1.17
NPLOC4-201ENST00000331134 LEKR1Q6ZMV7 388 aa22.34■■□□□ 1.17
NPLOC4-201ENST00000331134 HIP1O00291 1037 aa22.34■■□□□ 1.17
NPLOC4-201ENST00000331134 C16orf71Q8IYS4 520 aaPredicted RBP22.34■■□□□ 1.17
NPLOC4-201ENST00000331134 MYL6BP14649 208 aa22.34■■□□□ 1.17
NPLOC4-201ENST00000331134 ANKRD1Q15327 319 aa22.34■■□□□ 1.17
NPLOC4-201ENST00000331134 ALDH1L2Q3SY69 923 aa22.34■■□□□ 1.17
NPLOC4-201ENST00000331134 PLEKHH2Q8IVE3 1493 aa22.34■■□□□ 1.17
NPLOC4-201ENST00000331134 PTPN23Q9H3S7 1636 aa22.34■■□□□ 1.17
NPLOC4-201ENST00000331134 WAPLQ7Z5K2 1190 aa22.33■■□□□ 1.17
NPLOC4-201ENST00000331134 AK7Q96M32 723 aa22.33■■□□□ 1.17
NPLOC4-201ENST00000331134 RAB11FIP3O75154 756 aa22.33■■□□□ 1.16
NPLOC4-201ENST00000331134 VPS37DQ86XT2 251 aa22.32■■□□□ 1.16
NPLOC4-201ENST00000331134 CCDC47Q96A33 483 aaKnown RBP22.32■■□□□ 1.16
NPLOC4-201ENST00000331134 BOLA2Q9H3K6 86 aa22.32■■□□□ 1.16
NPLOC4-201ENST00000331134 ZSCAN31Q96LW9 406 aaPredicted RBP22.32■■□□□ 1.16
NPLOC4-201ENST00000331134 ERC1Q8IUD2 1116 aa22.31■■□□□ 1.16
NPLOC4-201ENST00000331134 TMX3Q96JJ7 454 aa22.31■■□□□ 1.16
NPLOC4-201ENST00000331134 POLR3GO15318 223 aaPredicted RBP22.31■■□□□ 1.16
NPLOC4-201ENST00000331134 CFAP100Q494V2 611 aa22.31■■□□□ 1.16
NPLOC4-201ENST00000331134 DHX37Q8IY37 1157 aaKnown RBP22.31■■□□□ 1.16
NPLOC4-201ENST00000331134 CFAP45Q9UL16 551 aa22.31■■□□□ 1.16
NPLOC4-201ENST00000331134 NME9Q86XW9 330 aa22.3■■□□□ 1.16
NPLOC4-201ENST00000331134 CLIP2Q9UDT6 1046 aa22.3■■□□□ 1.16
NPLOC4-201ENST00000331134 GRIN2BQ13224 1484 aa22.3■■□□□ 1.16
NPLOC4-201ENST00000331134 SDSP20132 328 aa22.3■■□□□ 1.16
NPLOC4-201ENST00000331134 NUCB1Q02818 461 aa22.3■■□□□ 1.16
NPLOC4-201ENST00000331134 ZGPATQ8N5A5 531 aaKnown RBP22.3■■□□□ 1.16
NPLOC4-201ENST00000331134 LRRFIP2Q9Y608 721 aaKnown RBP22.3■■□□□ 1.16
NPLOC4-201ENST00000331134 TSPYL1Q9H0U9 437 aa22.29■■□□□ 1.16
NPLOC4-201ENST00000331134 URI1O94763 535 aaPredicted RBP22.29■■□□□ 1.16
NPLOC4-201ENST00000331134 FKBP4Q02790 459 aaKnown RBP eCLIP22.29■■□□□ 1.16
NPLOC4-201ENST00000331134 SYNJ2O15056 1496 aa22.29■■□□□ 1.16
NPLOC4-201ENST00000331134 ZNF530Q6P9A1 599 aaPredicted RBP22.29■■□□□ 1.16
NPLOC4-201ENST00000331134 ARHGEF11O15085 1522 aa22.29■■□□□ 1.16
NPLOC4-201ENST00000331134 TOPBP1Q92547 1522 aa22.29■■□□□ 1.16
NPLOC4-201ENST00000331134 DYNC1I1O14576 645 aa22.28■■□□□ 1.16
NPLOC4-201ENST00000331134 SFPQP23246 707 aaKnown RBP eCLIP22.28■■□□□ 1.16
NPLOC4-201ENST00000331134 TMX1Q9H3N1 280 aa22.28■■□□□ 1.16
NPLOC4-201ENST00000331134 LRSAM1Q6UWE0 723 aa22.28■■□□□ 1.16
NPLOC4-201ENST00000331134 LIMCH1Q9UPQ0 1083 aa22.28■■□□□ 1.16
NPLOC4-201ENST00000331134 HDAC1Q13547 482 aaPredicted RBP22.28■■□□□ 1.16
NPLOC4-201ENST00000331134 TCEANC2Q96MN5 208 aa22.28■■□□□ 1.16
NPLOC4-201ENST00000331134 CCDC85AQ96PX6 553 aaPredicted RBP22.28■■□□□ 1.16
NPLOC4-201ENST00000331134 FAM193AP78312 1265 aa22.28■■□□□ 1.16
NPLOC4-201ENST00000331134 FILIP1LQ4L180 1135 aa22.28■■□□□ 1.16
NPLOC4-201ENST00000331134 EVA1CP58658 441 aa22.27■■□□□ 1.16
NPLOC4-201ENST00000331134 OFD1O75665 1012 aa22.27■■□□□ 1.16
NPLOC4-201ENST00000331134 TTC22Q5TAA0 569 aa22.27■■□□□ 1.16
NPLOC4-201ENST00000331134 KIF18AQ8NI77 898 aa22.27■■□□□ 1.16
NPLOC4-201ENST00000331134 STX6O43752 255 aa22.27■■□□□ 1.16
NPLOC4-201ENST00000331134 CCDC8Q9H0W5 538 aaPredicted RBP22.27■■□□□ 1.16
NPLOC4-201ENST00000331134 ZKSCAN5Q9Y2L8 839 aa22.27■■□□□ 1.16
NPLOC4-201ENST00000331134 RAPGEF3O95398 923 aa22.26■■□□□ 1.15
NPLOC4-201ENST00000331134 KIF1BPQ96EK5 621 aa22.26■■□□□ 1.15
NPLOC4-201ENST00000331134 BIN1O00499 593 aa22.26■■□□□ 1.15
NPLOC4-201ENST00000331134 PPFIBP1Q86W92 1011 aa22.26■■□□□ 1.15
NPLOC4-201ENST00000331134 CCP110O43303 1012 aa22.26■■□□□ 1.15
NPLOC4-201ENST00000331134 JMYQ8N9B5 988 aa22.26■■□□□ 1.15
NPLOC4-201ENST00000331134 SLC26A8Q96RN1 970 aa22.26■■□□□ 1.15
NPLOC4-201ENST00000331134 ZNF165P49910 485 aa22.25■■□□□ 1.15
NPLOC4-201ENST00000331134 NOLC1Q14978 699 aaKnown RBP eCLIP22.25■■□□□ 1.15
NPLOC4-201ENST00000331134 TMCO3Q6UWJ1 677 aa22.25■■□□□ 1.15
NPLOC4-201ENST00000331134 CCDC102AQ96A19 550 aa22.25■■□□□ 1.15
NPLOC4-201ENST00000331134 MEIS3Q99687 375 aa22.25■■□□□ 1.15
NPLOC4-201ENST00000331134 PARD3Q8TEW0 1356 aa22.25■■□□□ 1.15
NPLOC4-201ENST00000331134 GLRX3O76003 335 aaKnown RBP22.25■■□□□ 1.15
NPLOC4-201ENST00000331134 ZBTB9Q96C00 473 aa22.25■■□□□ 1.15
NPLOC4-201ENST00000331134 MBIPQ9NS73 344 aa22.24■■□□□ 1.15
NPLOC4-201ENST00000331134 DHX29Q7Z478 1369 aaKnown RBP22.24■■□□□ 1.15
NPLOC4-201ENST00000331134 TAF7Q15545 349 aaPredicted RBP22.24■■□□□ 1.15
NPLOC4-201ENST00000331134 SCAND2PQ9GZW5 306 aaPredicted RBP22.24■■□□□ 1.15
NPLOC4-201ENST00000331134 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.24■■□□□ 1.15
NPLOC4-201ENST00000331134 DMRT2Q9Y5R5 561 aa22.24■■□□□ 1.15
NPLOC4-201ENST00000331134 V9GYY5 206 aaPredicted RBP22.24■■□□□ 1.15
NPLOC4-201ENST00000331134 NECAB1Q8N987 351 aa22.24■■□□□ 1.15
NPLOC4-201ENST00000331134 ERCC4Q92889 916 aaPredicted RBP22.24■■□□□ 1.15
NPLOC4-201ENST00000331134 PEG3Q9GZU2 1588 aa22.24■■□□□ 1.15
NPLOC4-201ENST00000331134 GJB2P29033 226 aa22.24■■□□□ 1.15
NPLOC4-201ENST00000331134 G3V3G9 751 aa22.23■■□□□ 1.15
NPLOC4-201ENST00000331134 DCAF8Q5TAQ9 597 aa22.23■■□□□ 1.15
NPLOC4-201ENST00000331134 CNPY2Q9Y2B0 182 aa22.23■■□□□ 1.15
NPLOC4-201ENST00000331134 MCM5P33992 734 aa22.23■■□□□ 1.15
NPLOC4-201ENST00000331134 RAB3GAP1Q15042 981 aa22.23■■□□□ 1.15
NPLOC4-201ENST00000331134 CAMSAP2Q08AD1 1489 aa22.23■■□□□ 1.15
NPLOC4-201ENST00000331134 ISM2Q6H9L7 571 aa22.22■■□□□ 1.15
NPLOC4-201ENST00000331134 RTEL1-TNFRSF6BF6WH68 1400 aa22.22■■□□□ 1.15
NPLOC4-201ENST00000331134 PER1O15534 1290 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms