RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 TPD52L1Q16890 204 aaPredicted RBP24.76■■□□□ 1.55
CMTM4-201ENST00000330687 CCDC186Q7Z3E2 898 aa24.76■■□□□ 1.55
CMTM4-201ENST00000330687 CFAP44Q96MT7 982 aa24.76■■□□□ 1.55
CMTM4-201ENST00000330687 SRCIN1Q9C0H9 1055 aa24.76■■□□□ 1.55
CMTM4-201ENST00000330687 FAM83GA6ND36 823 aa24.76■■□□□ 1.55
CMTM4-201ENST00000330687 PDIA4P13667 645 aaKnown RBP24.76■■□□□ 1.55
CMTM4-201ENST00000330687 PHACTR3Q96KR7 559 aa24.76■■□□□ 1.55
CMTM4-201ENST00000330687 ZNF518AQ6AHZ1 1483 aa24.76■■□□□ 1.55
CMTM4-201ENST00000330687 MAP4K4O95819 1239 aaPredicted RBP24.75■■□□□ 1.55
CMTM4-201ENST00000330687 CCDC112Q8NEF3 446 aa24.75■■□□□ 1.55
CMTM4-201ENST00000330687 DCTPP1Q9H773 170 aa24.75■■□□□ 1.55
CMTM4-201ENST00000330687 VPS37CA5D8V6 355 aaPredicted RBP24.74■■□□□ 1.55
CMTM4-201ENST00000330687 AP5Z1O43299 807 aa24.74■■□□□ 1.55
CMTM4-201ENST00000330687 KDM5AP29375 1690 aaKnown RBP24.74■■□□□ 1.55
CMTM4-201ENST00000330687 DDX54Q8TDD1 881 aaKnown RBP24.74■■□□□ 1.55
CMTM4-201ENST00000330687 WDR33Q9C0J8 1336 aaKnown RBP24.73■■□□□ 1.55
CMTM4-201ENST00000330687 MX1P20591 662 aa24.73■■□□□ 1.55
CMTM4-201ENST00000330687 CKAP2LQ8IYA6 745 aa24.73■■□□□ 1.55
CMTM4-201ENST00000330687 TRIM5Q9C035 493 aa24.73■■□□□ 1.55
CMTM4-201ENST00000330687 UVSSAQ2YD98 709 aa24.73■■□□□ 1.55
CMTM4-201ENST00000330687 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.73■■□□□ 1.55
CMTM4-201ENST00000330687 API5Q9BZZ5 524 aaKnown RBP24.73■■□□□ 1.55
CMTM4-201ENST00000330687 MBIPQ9NS73 344 aa24.73■■□□□ 1.55
CMTM4-201ENST00000330687 ST7Q9NRC1 585 aa24.72■■□□□ 1.55
CMTM4-201ENST00000330687 NRBP1Q9UHY1 535 aa24.72■■□□□ 1.55
CMTM4-201ENST00000330687 LAMC1P11047 1609 aa24.72■■□□□ 1.55
CMTM4-201ENST00000330687 PBRM1Q86U86 1689 aa24.72■■□□□ 1.55
CMTM4-201ENST00000330687 LUZP1Q86V48 1076 aa24.71■■□□□ 1.55
CMTM4-201ENST00000330687 IRX5P78411 483 aaPredicted RBP24.71■■□□□ 1.55
CMTM4-201ENST00000330687 MEIS3Q99687 375 aa24.71■■□□□ 1.55
CMTM4-201ENST00000330687 SPTLC3Q9NUV7 552 aa24.71■■□□□ 1.55
CMTM4-201ENST00000330687 TAF3Q5VWG9 929 aa24.7■■□□□ 1.54
CMTM4-201ENST00000330687 FERMT3Q86UX7 667 aa24.7■■□□□ 1.54
CMTM4-201ENST00000330687 FEZ1Q99689 392 aa24.7■■□□□ 1.54
CMTM4-201ENST00000330687 TARBP1Q13395 1621 aaKnown RBP24.7■■□□□ 1.54
CMTM4-201ENST00000330687 MINK1Q8N4C8 1332 aaPredicted RBP24.69■■□□□ 1.54
CMTM4-201ENST00000330687 ZBTB9Q96C00 473 aa24.68■■□□□ 1.54
CMTM4-201ENST00000330687 CCDC66A2RUB6 948 aa24.68■■□□□ 1.54
CMTM4-201ENST00000330687 ANKRD7Q92527 254 aa24.68■■□□□ 1.54
CMTM4-201ENST00000330687 TRMT1Q9NXH9 659 aaKnown RBP24.68■■□□□ 1.54
CMTM4-201ENST00000330687 EVC2Q86UK5 1308 aa24.68■■□□□ 1.54
CMTM4-201ENST00000330687 CPA1P15085 419 aa24.68■■□□□ 1.54
CMTM4-201ENST00000330687 CFAP74Q9C0B2 1584 aa24.68■■□□□ 1.54
CMTM4-201ENST00000330687 DNM1Q05193 864 aaKnown RBP24.67■■□□□ 1.54
CMTM4-201ENST00000330687 MYOM1P52179 1685 aa24.67■■□□□ 1.54
CMTM4-201ENST00000330687 CTNNA3Q9UI47 895 aa24.67■■□□□ 1.54
CMTM4-201ENST00000330687 AEBP2Q6ZN18 517 aaPredicted RBP24.66■■□□□ 1.54
CMTM4-201ENST00000330687 FBXW7Q969H0 707 aa24.66■■□□□ 1.54
CMTM4-201ENST00000330687 SMC3Q9UQE7 1217 aa24.66■■□□□ 1.54
CMTM4-201ENST00000330687 IFT140Q96RY7 1462 aa24.66■■□□□ 1.54
CMTM4-201ENST00000330687 GOLGA6L4A6NEF3 574 aa24.66■■□□□ 1.54
CMTM4-201ENST00000330687 GNAI1P63096 354 aa24.66■■□□□ 1.54
CMTM4-201ENST00000330687 TIGD1Q96MW7 591 aa24.66■■□□□ 1.54
CMTM4-201ENST00000330687 MADDQ8WXG6 1647 aa24.65■■□□□ 1.54
CMTM4-201ENST00000330687 EFCAB2Q5VUJ9 269 aa24.65■■□□□ 1.54
CMTM4-201ENST00000330687 TRIM34Q9BYJ4 488 aa24.65■■□□□ 1.54
CMTM4-201ENST00000330687 IL16Q14005 1332 aa24.65■■□□□ 1.54
CMTM4-201ENST00000330687 FAM173BQ6P4H8 233 aa24.65■■□□□ 1.54
CMTM4-201ENST00000330687 SYTL4Q96C24 671 aaPredicted RBP24.65■■□□□ 1.54
CMTM4-201ENST00000330687 SAMD9LQ8IVG5 1584 aa24.64■■□□□ 1.54
CMTM4-201ENST00000330687 MCM2P49736 904 aa24.64■■□□□ 1.54
CMTM4-201ENST00000330687 CEP85Q6P2H3 762 aa24.64■■□□□ 1.54
CMTM4-201ENST00000330687 ZFP91Q96JP5 570 aaPredicted RBP24.64■■□□□ 1.54
CMTM4-201ENST00000330687 F6X3S4 739 aa24.64■■□□□ 1.54
CMTM4-201ENST00000330687 PDE1AP54750 535 aa24.64■■□□□ 1.54
CMTM4-201ENST00000330687 IPO4Q8TEX9 1081 aaKnown RBP24.64■■□□□ 1.54
CMTM4-201ENST00000330687 CCDC192P0DO97 292 aa24.64■■□□□ 1.53
CMTM4-201ENST00000330687 PAXIP1Q6ZW49 1069 aaPredicted RBP24.64■■□□□ 1.53
CMTM4-201ENST00000330687 TNNT3P45378 269 aaPredicted RBP24.63■■□□□ 1.53
CMTM4-201ENST00000330687 UBE2HP62256 183 aa24.63■■□□□ 1.53
CMTM4-201ENST00000330687 SLFN14P0C7P3 912 aa24.63■■□□□ 1.53
CMTM4-201ENST00000330687 ANKRD44Q8N8A2 993 aa24.63■■□□□ 1.53
CMTM4-201ENST00000330687 KRT222Q8N1A0 295 aa24.63■■□□□ 1.53
CMTM4-201ENST00000330687 ESYT1Q9BSJ8 1104 aa24.63■■□□□ 1.53
CMTM4-201ENST00000330687 NECTIN2Q92692 538 aa24.62■■□□□ 1.53
CMTM4-201ENST00000330687 GTF3C6Q969F1 213 aa24.61■■□□□ 1.53
CMTM4-201ENST00000330687 STX6O43752 255 aa24.61■■□□□ 1.53
CMTM4-201ENST00000330687 IL1RAPL2Q9NP60 686 aa24.61■■□□□ 1.53
CMTM4-201ENST00000330687 FYB1O15117 783 aa24.61■■□□□ 1.53
CMTM4-201ENST00000330687 CCDC83Q8IWF9 413 aa24.61■■□□□ 1.53
CMTM4-201ENST00000330687 SYT1P21579 422 aa24.6■■□□□ 1.53
CMTM4-201ENST00000330687 ZSCAN22P10073 491 aaPredicted RBP24.6■■□□□ 1.53
CMTM4-201ENST00000330687 IQGAP1P46940 1657 aa24.6■■□□□ 1.53
CMTM4-201ENST00000330687 UGGT1Q9NYU2 1555 aa24.6■■□□□ 1.53
CMTM4-201ENST00000330687 GGT6Q6P531 493 aa24.6■■□□□ 1.53
CMTM4-201ENST00000330687 TERF2Q15554 542 aa24.59■■□□□ 1.53
CMTM4-201ENST00000330687 FILIP1Q7Z7B0 1213 aa24.59■■□□□ 1.53
CMTM4-201ENST00000330687 DDX41Q9UJV9 622 aaKnown RBP24.59■■□□□ 1.53
CMTM4-201ENST00000330687 ABCC4O15439 1325 aa24.59■■□□□ 1.53
CMTM4-201ENST00000330687 ANKRD36BQ8N2N9 1353 aa24.59■■□□□ 1.53
CMTM4-201ENST00000330687 ERCC6Q03468 1493 aa24.59■■□□□ 1.53
CMTM4-201ENST00000330687 GABPB1Q06547 395 aaPredicted RBP24.59■■□□□ 1.53
CMTM4-201ENST00000330687 ELF2Q15723 593 aa24.59■■□□□ 1.53
CMTM4-201ENST00000330687 ARHGAP45Q92619 1136 aa24.59■■□□□ 1.53
CMTM4-201ENST00000330687 MIS18AQ9NYP9 233 aa24.59■■□□□ 1.53
CMTM4-201ENST00000330687 ZNF215Q9UL58 517 aaPredicted RBP24.59■■□□□ 1.53
CMTM4-201ENST00000330687 RNF17Q9BXT8 1623 aaKnown RBP24.59■■□□□ 1.53
CMTM4-201ENST00000330687 CEP152O94986 1710 aa24.58■■□□□ 1.53
CMTM4-201ENST00000330687 HMMRO75330 724 aa24.58■■□□□ 1.53
CMTM4-201ENST00000330687 NFE2L2Q16236 605 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms