RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 NEK4P51957 841 aa7.41□□□□□ -1.22
SSH1-202ENST00000326495 SEPT11Q9NVA2 429 aaKnown RBP7.41□□□□□ -1.22
SSH1-202ENST00000326495 TSPYL4Q9UJ04 414 aa7.41□□□□□ -1.22
SSH1-202ENST00000326495 NOL7Q9UMY1 257 aaKnown RBP7.41□□□□□ -1.22
SSH1-202ENST00000326495 GOLIM4O00461 696 aa7.41□□□□□ -1.22
SSH1-202ENST00000326495 NCAPD3P42695 1498 aa7.41□□□□□ -1.22
SSH1-202ENST00000326495 GNAI2P04899 355 aa7.41□□□□□ -1.22
SSH1-202ENST00000326495 KIF14Q15058 1648 aa7.41□□□□□ -1.22
SSH1-202ENST00000326495 GCOM1H8Y6P7 765 aaPredicted RBP7.41□□□□□ -1.22
SSH1-202ENST00000326495 MYZAPP0CAP1 466 aa7.41□□□□□ -1.22
SSH1-202ENST00000326495 SH2B1Q9NRF2 756 aaPredicted RBP7.41□□□□□ -1.22
SSH1-202ENST00000326495 FAM135AQ9P2D6 1515 aa7.41□□□□□ -1.22
SSH1-202ENST00000326495 CCDC181Q5TID7 509 aa7.41□□□□□ -1.22
SSH1-202ENST00000326495 ZNF692Q9BU19 519 aaPredicted RBP7.41□□□□□ -1.22
SSH1-202ENST00000326495 DYNC1I1O14576 645 aa7.41□□□□□ -1.22
SSH1-202ENST00000326495 MCM4P33991 863 aa7.41□□□□□ -1.22
SSH1-202ENST00000326495 FAM193AP78312 1265 aa7.41□□□□□ -1.22
SSH1-202ENST00000326495 CCDC148Q8NFR7 591 aa7.41□□□□□ -1.22
SSH1-202ENST00000326495 KAT6AQ92794 2004 aa7.41□□□□□ -1.22
SSH1-202ENST00000326495 CDK5RAP3Q96JB5 506 aa7.41□□□□□ -1.22
SSH1-202ENST00000326495 SRRTQ9BXP5 876 aaKnown RBP7.41□□□□□ -1.22
SSH1-202ENST00000326495 CYP46A1Q9Y6A2 500 aa7.41□□□□□ -1.22
SSH1-202ENST00000326495 CCDC172P0C7W6 258 aa7.4□□□□□ -1.22
SSH1-202ENST00000326495 HS1BP3Q53T59 392 aa7.4□□□□□ -1.22
SSH1-202ENST00000326495 UBXN4Q92575 508 aa7.4□□□□□ -1.22
SSH1-202ENST00000326495 TTC12Q9H892 705 aaPredicted RBP7.4□□□□□ -1.22
SSH1-202ENST00000326495 IFI16Q16666 785 aaKnown RBP7.4□□□□□ -1.22
SSH1-202ENST00000326495 HSP90AB3PQ58FF7 597 aa7.4□□□□□ -1.22
SSH1-202ENST00000326495 GIGYF2Q6Y7W6 1299 aaKnown RBP7.4□□□□□ -1.22
SSH1-202ENST00000326495 SREK1Q8WXA9 508 aaKnown RBP7.4□□□□□ -1.22
SSH1-202ENST00000326495 PANK1Q8TE04 598 aa7.4□□□□□ -1.22
SSH1-202ENST00000326495 CFAP57Q96MR6 1250 aa7.4□□□□□ -1.22
SSH1-202ENST00000326495 BMP15O95972 392 aa7.4□□□□□ -1.22
SSH1-202ENST00000326495 KRI1Q8N9T8 703 aaKnown RBP7.4□□□□□ -1.22
SSH1-202ENST00000326495 SHTN1A0MZ66 631 aa7.4□□□□□ -1.23
SSH1-202ENST00000326495 FIBPO43427 364 aa7.4□□□□□ -1.23
SSH1-202ENST00000326495 CCDC57Q2TAC2 916 aa7.4□□□□□ -1.23
SSH1-202ENST00000326495 KANK3Q6NY19 840 aa7.4□□□□□ -1.23
SSH1-202ENST00000326495 IVLP07476 585 aa7.4□□□□□ -1.23
SSH1-202ENST00000326495 CNGA1P29973 690 aa7.4□□□□□ -1.23
SSH1-202ENST00000326495 PRIMPOLQ96LW4 560 aa7.4□□□□□ -1.23
SSH1-202ENST00000326495 STK38Q15208 465 aa7.4□□□□□ -1.23
SSH1-202ENST00000326495 SYNJ1O43426 1573 aa7.4□□□□□ -1.23
SSH1-202ENST00000326495 KIAA1107Q9UPP5 1409 aa7.4□□□□□ -1.23
SSH1-202ENST00000326495 STMN4Q9H169 189 aaPredicted RBP7.4□□□□□ -1.23
SSH1-202ENST00000326495 GIMAP7Q8NHV1 300 aa7.39□□□□□ -1.23
SSH1-202ENST00000326495 SLC52A1Q9NWF4 448 aa7.39□□□□□ -1.23
SSH1-202ENST00000326495 ENOX2Q16206 610 aaKnown RBP7.39□□□□□ -1.23
SSH1-202ENST00000326495 CCDC183Q5T5S1 534 aa7.39□□□□□ -1.23
SSH1-202ENST00000326495 TMCO3Q6UWJ1 677 aa7.39□□□□□ -1.23
SSH1-202ENST00000326495 FSD1Q9BTV5 496 aa7.39□□□□□ -1.23
SSH1-202ENST00000326495 TTLL5Q6EMB2 1281 aa7.39□□□□□ -1.23
SSH1-202ENST00000326495 SPECC1LQ69YQ0 1117 aa7.39□□□□□ -1.23
SSH1-202ENST00000326495 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.39□□□□□ -1.232e-7■■■■■ 96.1
SSH1-202ENST00000326495 PRPHP41219 470 aa7.39□□□□□ -1.23
SSH1-202ENST00000326495 ME1P48163 572 aa7.39□□□□□ -1.23
SSH1-202ENST00000326495 FBXW7Q969H0 707 aa7.39□□□□□ -1.23
SSH1-202ENST00000326495 NDC80O14777 642 aa7.39□□□□□ -1.23
SSH1-202ENST00000326495 LRRC27Q9C0I9 530 aa7.39□□□□□ -1.23
SSH1-202ENST00000326495 RBM25P49756 843 aaKnown RBP7.39□□□□□ -1.23
SSH1-202ENST00000326495 MVPQ14764 893 aaKnown RBP7.39□□□□□ -1.23
SSH1-202ENST00000326495 CRACR2AQ9BSW2 395 aa7.39□□□□□ -1.23
SSH1-202ENST00000326495 LRRC45Q96CN5 670 aa7.38□□□□□ -1.23
SSH1-202ENST00000326495 MAP3K11Q16584 847 aa7.38□□□□□ -1.23
SSH1-202ENST00000326495 NUP62CLQ9H1M0 184 aa7.38□□□□□ -1.23
SSH1-202ENST00000326495 PAXBP1Q9Y5B6 917 aa7.38□□□□□ -1.23
SSH1-202ENST00000326495 CCDC171Q6TFL3 1326 aa7.38□□□□□ -1.23
SSH1-202ENST00000326495 CETN1Q12798 172 aa7.38□□□□□ -1.23
SSH1-202ENST00000326495 SFPQP23246 707 aaKnown RBP eCLIP7.38□□□□□ -1.23
SSH1-202ENST00000326495 FILIP1Q7Z7B0 1213 aa7.38□□□□□ -1.23
SSH1-202ENST00000326495 FAM114A2Q9NRY5 505 aa7.38□□□□□ -1.23
SSH1-202ENST00000326495 TMCO5BA8MYB1 307 aa7.38□□□□□ -1.23
SSH1-202ENST00000326495 CNPY4Q8N129 248 aa7.38□□□□□ -1.23
SSH1-202ENST00000326495 SPC24Q8NBT2 197 aa7.38□□□□□ -1.23
SSH1-202ENST00000326495 LTV1Q96GA3 475 aaPredicted RBP7.38□□□□□ -1.23
SSH1-202ENST00000326495 EPB41L2O43491 1005 aaKnown RBP7.38□□□□□ -1.23
SSH1-202ENST00000326495 GPRASP1Q5JY77 1395 aa7.38□□□□□ -1.23
SSH1-202ENST00000326495 PTPN14Q15678 1187 aa7.38□□□□□ -1.23
SSH1-202ENST00000326495 C10orf67Q8IYJ2 551 aa7.38□□□□□ -1.23
SSH1-202ENST00000326495 KIF4AO95239 1232 aa7.38□□□□□ -1.23
SSH1-202ENST00000326495 SP100P23497 879 aaPredicted RBP7.38□□□□□ -1.23
SSH1-202ENST00000326495 PAXIP1Q6ZW49 1069 aaPredicted RBP7.38□□□□□ -1.23
SSH1-202ENST00000326495 SPATA32Q96LK8 384 aa7.37□□□□□ -1.23
SSH1-202ENST00000326495 RAB11FIP3O75154 756 aa7.37□□□□□ -1.23
SSH1-202ENST00000326495 CLUL1Q15846 466 aa7.37□□□□□ -1.23
SSH1-202ENST00000326495 RBM33Q96EV2 1170 aaKnown RBP7.37□□□□□ -1.23
SSH1-202ENST00000326495 ADGBQ8N7X0 1667 aa7.37□□□□□ -1.23
SSH1-202ENST00000326495 RIC3Q7Z5B4 369 aa7.37□□□□□ -1.23
SSH1-202ENST00000326495 C9orf84Q5VXU9 1444 aa7.37□□□□□ -1.23
SSH1-202ENST00000326495 TTC21AQ8NDW8 1320 aa7.37□□□□□ -1.23
SSH1-202ENST00000326495 USP37Q86T82 979 aa7.37□□□□□ -1.23
SSH1-202ENST00000326495 PAF1Q8N7H5 531 aa7.37□□□□□ -1.23
SSH1-202ENST00000326495 ADAMTS8Q9UP79 889 aa7.37□□□□□ -1.23
SSH1-202ENST00000326495 TUBB2AQ13885 445 aa7.37□□□□□ -1.23
SSH1-202ENST00000326495 TUBB2BQ9BVA1 445 aa7.37□□□□□ -1.23
SSH1-202ENST00000326495 PDZRN3Q9UPQ7 1066 aa7.37□□□□□ -1.23
SSH1-202ENST00000326495 RBM26Q5T8P6 1007 aaKnown RBP7.37□□□□□ -1.23
SSH1-202ENST00000326495 KIF1BO60333 1816 aa7.37□□□□□ -1.23
SSH1-202ENST00000326495 CROCCP2Q86T23 111 aa7.37□□□□□ -1.23
SSH1-202ENST00000326495 UPF3BQ9BZI7 483 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms