RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 OTUD7AQ8TE49 926 aaPredicted RBP9.6□□□□□ -0.87
RTL3-201ENST00000321110 PLEKHF1Q96S99 279 aa9.6□□□□□ -0.87
RTL3-201ENST00000321110 PTPRTO14522 1441 aa9.6□□□□□ -0.87
RTL3-201ENST00000321110 SMTNL1A8MU46 457 aa9.59□□□□□ -0.87
RTL3-201ENST00000321110 TRIM6-TRIM34B2RNG4 842 aa9.59□□□□□ -0.87
RTL3-201ENST00000321110 SDSP20132 328 aa9.59□□□□□ -0.87
RTL3-201ENST00000321110 TRIM34Q9BYJ4 488 aa9.59□□□□□ -0.87
RTL3-201ENST00000321110 SLC12A5Q9H2X9 1139 aa9.59□□□□□ -0.87
RTL3-201ENST00000321110 TRPM2O94759 1503 aa9.59□□□□□ -0.87
RTL3-201ENST00000321110 PLCH2O75038 1416 aa9.59□□□□□ -0.87
RTL3-201ENST00000321110 CHRM1P11229 460 aaPredicted RBP9.59□□□□□ -0.87
RTL3-201ENST00000321110 NEK4P51957 841 aa9.59□□□□□ -0.87
RTL3-201ENST00000321110 CUL4AQ13619 759 aa9.59□□□□□ -0.87
RTL3-201ENST00000321110 ALDH1L2Q3SY69 923 aa9.59□□□□□ -0.87
RTL3-201ENST00000321110 CFAP70Q5T0N1 1121 aa9.59□□□□□ -0.87
RTL3-201ENST00000321110 ST7Q9NRC1 585 aa9.59□□□□□ -0.87
RTL3-201ENST00000321110 CALCOCO1Q9P1Z2 691 aa9.59□□□□□ -0.87
RTL3-201ENST00000321110 TPRNQ4KMQ1 711 aa9.58□□□□□ -0.88
RTL3-201ENST00000321110 TEX2Q8IWB9 1127 aa9.58□□□□□ -0.88
RTL3-201ENST00000321110 C16orf45Q96MC5 204 aaPredicted RBP9.58□□□□□ -0.88
RTL3-201ENST00000321110 CFAP44Q96MT7 982 aa9.58□□□□□ -0.88
RTL3-201ENST00000321110 TRERF1Q96PN7 1200 aa9.58□□□□□ -0.88
RTL3-201ENST00000321110 FUCA2Q9BTY2 467 aa9.58□□□□□ -0.88
RTL3-201ENST00000321110 FAM53CQ9NYF3 392 aa9.58□□□□□ -0.88
RTL3-201ENST00000321110 YEATS2Q9ULM3 1422 aa9.58□□□□□ -0.88
RTL3-201ENST00000321110 IL16Q14005 1332 aa9.58□□□□□ -0.88
RTL3-201ENST00000321110 ZCCHC11Q5TAX3 1644 aaKnown RBP9.58□□□□□ -0.88
RTL3-201ENST00000321110 MX1P20591 662 aa9.58□□□□□ -0.88
RTL3-201ENST00000321110 PTGS1P23219 599 aa9.58□□□□□ -0.88
RTL3-201ENST00000321110 KMT5BQ4FZB7 885 aa9.58□□□□□ -0.88
RTL3-201ENST00000321110 PIK3R4Q99570 1358 aa9.58□□□□□ -0.88
RTL3-201ENST00000321110 TPM3P06753 285 aa9.57□□□□□ -0.88
RTL3-201ENST00000321110 IRX3P78415 501 aaPredicted RBP9.57□□□□□ -0.88
RTL3-201ENST00000321110 SPAG9O60271 1321 aaKnown RBP9.57□□□□□ -0.88
RTL3-201ENST00000321110 TRAPPC8Q9Y2L5 1435 aa9.57□□□□□ -0.88
RTL3-201ENST00000321110 NOL8Q76FK4 1167 aaKnown RBP9.57□□□□□ -0.88
RTL3-201ENST00000321110 ZFP91Q96JP5 570 aaPredicted RBP9.57□□□□□ -0.88
RTL3-201ENST00000321110 ATAD2Q6PL18 1390 aa9.57□□□□□ -0.88
RTL3-201ENST00000321110 BRPF1P55201 1214 aaPredicted RBP9.56□□□□□ -0.88
RTL3-201ENST00000321110 LRMPQ12912 555 aa9.56□□□□□ -0.88
RTL3-201ENST00000321110 EFCAB2Q5VUJ9 269 aa9.56□□□□□ -0.88
RTL3-201ENST00000321110 GIMAP6Q6P9H5 292 aa9.56□□□□□ -0.88
RTL3-201ENST00000321110 TMEM87AQ8NBN3 555 aa9.56□□□□□ -0.88
RTL3-201ENST00000321110 FEZ2Q9UHY8 353 aaPredicted RBP9.56□□□□□ -0.88
RTL3-201ENST00000321110 REC8O95072 547 aa9.56□□□□□ -0.88
RTL3-201ENST00000321110 TNNT1P13805 278 aa9.56□□□□□ -0.88
RTL3-201ENST00000321110 RBM6P78332 1123 aaKnown RBP9.56□□□□□ -0.88
RTL3-201ENST00000321110 RGS22Q8NE09 1264 aa9.56□□□□□ -0.88
RTL3-201ENST00000321110 DCTPP1Q9H773 170 aa9.56□□□□□ -0.88
RTL3-201ENST00000321110 CNPY2Q9Y2B0 182 aa9.56□□□□□ -0.88
RTL3-201ENST00000321110 DEPDC5O75140 1603 aa9.56□□□□□ -0.88
RTL3-201ENST00000321110 KIAA1210Q9ULL0 1709 aa9.56□□□□□ -0.88
RTL3-201ENST00000321110 U2SURPO15042 1029 aaKnown RBP9.55□□□□□ -0.88
RTL3-201ENST00000321110 AEBP1Q8IUX7 1158 aa9.55□□□□□ -0.88
RTL3-201ENST00000321110 MRPL50Q8N5N7 158 aaKnown RBP9.55□□□□□ -0.88
RTL3-201ENST00000321110 CCDC112Q8NEF3 446 aa9.55□□□□□ -0.88
RTL3-201ENST00000321110 ZNF397Q8NF99 534 aaPredicted RBP9.55□□□□□ -0.88
RTL3-201ENST00000321110 INTS4Q96HW7 963 aaKnown RBP9.55□□□□□ -0.88
RTL3-201ENST00000321110 SRCIN1Q9C0H9 1055 aa9.55□□□□□ -0.88
RTL3-201ENST00000321110 TET3O43151 1660 aa9.55□□□□□ -0.88
RTL3-201ENST00000321110 RPAP1Q9BWH6 1393 aaPredicted RBP9.55□□□□□ -0.88
RTL3-201ENST00000321110 PTCH1Q13635 1447 aa9.55□□□□□ -0.88
RTL3-201ENST00000321110 UHRF1BP1LA0JNW5 1464 aa9.55□□□□□ -0.88
RTL3-201ENST00000321110 ZFYVE16Q7Z3T8 1539 aa9.55□□□□□ -0.88
RTL3-201ENST00000321110 ERC2O15083 957 aa9.55□□□□□ -0.88
RTL3-201ENST00000321110 KLHL34Q8N239 644 aa9.55□□□□□ -0.88
RTL3-201ENST00000321110 ZBTB9Q96C00 473 aa9.55□□□□□ -0.88
RTL3-201ENST00000321110 GOLGA6L6A8MZA4 724 aa9.54□□□□□ -0.88
RTL3-201ENST00000321110 HNRNPH2P55795 449 aaKnown RBP9.54□□□□□ -0.88
RTL3-201ENST00000321110 CASC1Q6TDU7 716 aa9.54□□□□□ -0.88
RTL3-201ENST00000321110 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.54□□□□□ -0.88
RTL3-201ENST00000321110 PALD1Q9ULE6 856 aa9.54□□□□□ -0.88
RTL3-201ENST00000321110 V9GYY5 206 aaPredicted RBP9.54□□□□□ -0.88
RTL3-201ENST00000321110 ABCC4O15439 1325 aa9.54□□□□□ -0.88
RTL3-201ENST00000321110 CYP2C19P33261 490 aa9.54□□□□□ -0.88
RTL3-201ENST00000321110 MCM2P49736 904 aa9.54□□□□□ -0.88
RTL3-201ENST00000321110 FBXO38Q6PIJ6 1188 aa9.54□□□□□ -0.88
RTL3-201ENST00000321110 IFT57Q9NWB7 429 aa9.54□□□□□ -0.88
RTL3-201ENST00000321110 SBNO2Q9Y2G9 1366 aa9.53□□□□□ -0.88
RTL3-201ENST00000321110 WDR33Q9C0J8 1336 aaKnown RBP9.53□□□□□ -0.88
RTL3-201ENST00000321110 CCDC186Q7Z3E2 898 aa9.53□□□□□ -0.88
RTL3-201ENST00000321110 ARHGAP45Q92619 1136 aa9.53□□□□□ -0.88
RTL3-201ENST00000321110 ZNF215Q9UL58 517 aaPredicted RBP9.53□□□□□ -0.88
RTL3-201ENST00000321110 PAXBP1Q9Y5B6 917 aa9.53□□□□□ -0.88
RTL3-201ENST00000321110 KNDC1Q76NI1 1749 aa9.53□□□□□ -0.88
RTL3-201ENST00000321110 RTL1A6NKG5 1358 aa9.53□□□□□ -0.88
RTL3-201ENST00000321110 ADGRF5Q8IZF2 1346 aa9.53□□□□□ -0.88
RTL3-201ENST00000321110 NPM1P06748 294 aaKnown RBP eCLIP9.53□□□□□ -0.88
RTL3-201ENST00000321110 UBE2HP62256 183 aa9.53□□□□□ -0.88
RTL3-201ENST00000321110 TSPYL1Q9H0U9 437 aa9.53□□□□□ -0.88
RTL3-201ENST00000321110 ZNF446Q9NWS9 450 aa9.53□□□□□ -0.88
RTL3-201ENST00000321110 NRBP1Q9UHY1 535 aa9.53□□□□□ -0.88
RTL3-201ENST00000321110 MYOM2P54296 1465 aa9.53□□□□□ -0.88
RTL3-201ENST00000321110 ERBB3P21860 1342 aa9.53□□□□□ -0.88
RTL3-201ENST00000321110 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.52□□□□□ -0.88
RTL3-201ENST00000321110 VAMP4O75379 141 aa9.52□□□□□ -0.88
RTL3-201ENST00000321110 RAD51AP2Q09MP3 1159 aa9.52□□□□□ -0.88
RTL3-201ENST00000321110 TSPYL6Q8N831 410 aa9.52□□□□□ -0.88
RTL3-201ENST00000321110 KIF1BPQ96EK5 621 aa9.52□□□□□ -0.88
RTL3-201ENST00000321110 FAM193AP78312 1265 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms