RNA–Protein interactions for RNA: ENST00000319562.10

FARP1-201, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FARP1, Length 10,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-201ENST00000319562 C6orf163Q5TEZ5 329 aa14.18□□□□□ -0.14
FARP1-201ENST00000319562 GOPCQ9HD26 462 aa14.18□□□□□ -0.14
FARP1-201ENST00000319562 PDRG1Q9NUG6 133 aa14.18□□□□□ -0.14
FARP1-201ENST00000319562 CBX1P83916 185 aa14.18□□□□□ -0.14
FARP1-201ENST00000319562 MPNDQ8N594 471 aa14.18□□□□□ -0.14
FARP1-201ENST00000319562 PDS5BQ9NTI5 1447 aa14.18□□□□□ -0.14
FARP1-201ENST00000319562 GPATCH11Q8N954 259 aa14.18□□□□□ -0.14
FARP1-201ENST00000319562 SSBP05455 408 aaKnown RBP eCLIP14.18□□□□□ -0.14
FARP1-201ENST00000319562 GRIPAP1Q4V328 841 aa14.18□□□□□ -0.14
FARP1-201ENST00000319562 NUP133Q8WUM0 1156 aa14.18□□□□□ -0.14
FARP1-201ENST00000319562 SCAPERQ9BY12 1400 aa14.18□□□□□ -0.14
FARP1-201ENST00000319562 USO1O60763 962 aaKnown RBP14.18□□□□□ -0.14
FARP1-201ENST00000319562 FHOD3Q2V2M9 1422 aa14.18□□□□□ -0.14
FARP1-201ENST00000319562 KIF4BQ2VIQ3 1234 aa14.18□□□□□ -0.14
FARP1-201ENST00000319562 ANO10Q9NW15 660 aa14.18□□□□□ -0.14
FARP1-201ENST00000319562 BACH2Q9BYV9 841 aa14.17□□□□□ -0.14
FARP1-201ENST00000319562 NEMFO60524 1076 aa14.17□□□□□ -0.14
FARP1-201ENST00000319562 UBAC1Q9BSL1 405 aa14.17□□□□□ -0.14
FARP1-201ENST00000319562 BCCIPQ9P287 314 aaKnown RBP eCLIP14.17□□□□□ -0.14
FARP1-201ENST00000319562 CUX1P39880 1505 aa14.17□□□□□ -0.14
FARP1-201ENST00000319562 CCDC178Q5BJE1 867 aa14.17□□□□□ -0.14
FARP1-201ENST00000319562 CCDC183Q5T5S1 534 aa14.17□□□□□ -0.14
FARP1-201ENST00000319562 TSG101Q99816 390 aa14.17□□□□□ -0.14
FARP1-201ENST00000319562 UBE4AQ14139 1066 aa14.16□□□□□ -0.14
FARP1-201ENST00000319562 CACNA2D4Q7Z3S7 1137 aa14.16□□□□□ -0.14
FARP1-201ENST00000319562 SPECC1Q5M775 1068 aa14.16□□□□□ -0.14
FARP1-201ENST00000319562 DDX23Q9BUQ8 820 aaKnown RBP14.16□□□□□ -0.14
FARP1-201ENST00000319562 NOB1Q9ULX3 412 aaKnown RBP14.16□□□□□ -0.14
FARP1-201ENST00000319562 SYCE3A1L190 88 aa14.16□□□□□ -0.14
FARP1-201ENST00000319562 ZNF76P36508 570 aa14.16□□□□□ -0.14
FARP1-201ENST00000319562 CTAGE5O15320 804 aa14.15□□□□□ -0.14
FARP1-201ENST00000319562 URI1O94763 535 aaPredicted RBP14.15□□□□□ -0.14
FARP1-201ENST00000319562 CTR9Q6PD62 1173 aa14.15□□□□□ -0.14
FARP1-201ENST00000319562 TOP1P11387 765 aaKnown RBP14.15□□□□□ -0.14
FARP1-201ENST00000319562 TWISTNBQ3B726 338 aaPredicted RBP14.15□□□□□ -0.14
FARP1-201ENST00000319562 SMARCC1Q92922 1105 aaPredicted RBP14.15□□□□□ -0.14
FARP1-201ENST00000319562 RAI14Q9P0K7 980 aa14.15□□□□□ -0.14
FARP1-201ENST00000319562 GOLGA6L9A6NEM1 432 aa14.15□□□□□ -0.14
FARP1-201ENST00000319562 MPHOSPH10O00566 681 aaKnown RBP14.14□□□□□ -0.15
FARP1-201ENST00000319562 PLEKHO1Q53GL0 409 aaPredicted RBP14.14□□□□□ -0.15
FARP1-201ENST00000319562 LARP1Q6PKG0 1096 aaKnown RBP14.14□□□□□ -0.15
FARP1-201ENST00000319562 IPO4Q8TEX9 1081 aaKnown RBP14.14□□□□□ -0.15
FARP1-201ENST00000319562 PLEKHH1Q9ULM0 1364 aa14.14□□□□□ -0.15
FARP1-201ENST00000319562 GSDMDP57764 484 aa14.14□□□□□ -0.15
FARP1-201ENST00000319562 CHD1LQ86WJ1 897 aa14.14□□□□□ -0.15
FARP1-201ENST00000319562 BBXQ8WY36 941 aaPredicted RBP14.14□□□□□ -0.15
FARP1-201ENST00000319562 CCDC88BA6NC98 1476 aa14.14□□□□□ -0.15
FARP1-201ENST00000319562 CCDC150Q8NCX0 1101 aa14.14□□□□□ -0.15
FARP1-201ENST00000319562 TNIP1Q15025 636 aa14.13□□□□□ -0.15
FARP1-201ENST00000319562 JAKMIP1Q96N16 626 aaKnown RBP14.13□□□□□ -0.15
FARP1-201ENST00000319562 DDX12PQ92771 950 aa14.13□□□□□ -0.15
FARP1-201ENST00000319562 ALS2CR12Q96Q35 445 aa14.13□□□□□ -0.15
FARP1-201ENST00000319562 NLRP2Q9NX02 1062 aa14.13□□□□□ -0.15
FARP1-201ENST00000319562 FSD2A1L4K1 749 aa14.13□□□□□ -0.15
FARP1-201ENST00000319562 TDO2P48775 406 aa14.13□□□□□ -0.15
FARP1-201ENST00000319562 C1orf115Q9H7X2 142 aa14.13□□□□□ -0.15
FARP1-201ENST00000319562 DAAM2Q86T65 1068 aa14.13□□□□□ -0.15
FARP1-201ENST00000319562 FERP16591 822 aa14.13□□□□□ -0.15
FARP1-201ENST00000319562 ATF3P18847 181 aa14.13□□□□□ -0.15
FARP1-201ENST00000319562 PHAXQ9H814 394 aaKnown RBP14.13□□□□□ -0.15
FARP1-201ENST00000319562 ADAMTS8Q9UP79 889 aa14.13□□□□□ -0.15
FARP1-201ENST00000319562 TCP11L2Q8N4U5 519 aa14.12□□□□□ -0.15
FARP1-201ENST00000319562 SCAND2PQ9GZW5 306 aaPredicted RBP14.12□□□□□ -0.15
FARP1-201ENST00000319562 ZNF287Q9HBT7 754 aa14.12□□□□□ -0.15
FARP1-201ENST00000319562 MTHFSP49914 203 aa14.12□□□□□ -0.15
FARP1-201ENST00000319562 PRDM10Q9NQV6 1147 aa14.12□□□□□ -0.15
FARP1-201ENST00000319562 TIGD1Q96MW7 591 aa14.12□□□□□ -0.15
FARP1-201ENST00000319562 MCM5P33992 734 aa14.11□□□□□ -0.15
FARP1-201ENST00000319562 CLIP2Q9UDT6 1046 aa14.11□□□□□ -0.15
FARP1-201ENST00000319562 MNAT1P51948 309 aa14.11□□□□□ -0.15
FARP1-201ENST00000319562 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.11□□□□□ -0.154e-7■□□□□ 9.5
FARP1-201ENST00000319562 V9GYY5 206 aaPredicted RBP14.11□□□□□ -0.15
FARP1-201ENST00000319562 TNNT1P13805 278 aa14.11□□□□□ -0.15
FARP1-201ENST00000319562 NUP88Q99567 741 aaPredicted RBP14.11□□□□□ -0.15
FARP1-201ENST00000319562 RAB34Q9BZG1 259 aa14.11□□□□□ -0.15
FARP1-201ENST00000319562 MPHOSPH8Q99549 860 aa14.11□□□□□ -0.15
FARP1-201ENST00000319562 IBSPP21815 317 aaPredicted RBP14.11□□□□□ -0.15
FARP1-201ENST00000319562 PNISRQ8TF01 805 aaKnown RBP14.11□□□□□ -0.15
FARP1-201ENST00000319562 YEATS4O95619 227 aa14.11□□□□□ -0.15
FARP1-201ENST00000319562 FKBP4Q02790 459 aaKnown RBP eCLIP14.11□□□□□ -0.158e-8■■□□□ 12.7
FARP1-201ENST00000319562 KLHL34Q8N239 644 aa14.11□□□□□ -0.15
FARP1-201ENST00000319562 CTNNBL1Q8WYA6 563 aaPredicted RBP14.11□□□□□ -0.15
FARP1-201ENST00000319562 SEC63Q9UGP8 760 aaKnown RBP14.11□□□□□ -0.15
FARP1-201ENST00000319562 HLTFQ14527 1009 aaKnown RBP eCLIP14.11□□□□□ -0.15
FARP1-201ENST00000319562 HOMER2Q9NSB8 354 aa14.11□□□□□ -0.15
FARP1-201ENST00000319562 DNAAF4Q8WXU2 420 aa14.1□□□□□ -0.15
FARP1-201ENST00000319562 CASTP20810 708 aaKnown RBP14.1□□□□□ -0.15
FARP1-201ENST00000319562 SREK1Q8WXA9 508 aaKnown RBP14.1□□□□□ -0.15
FARP1-201ENST00000319562 U3KPZ7 1027 aaPredicted RBP14.1□□□□□ -0.15
FARP1-201ENST00000319562 PPP4R3AQ6IN85 833 aa14.1□□□□□ -0.15
FARP1-201ENST00000319562 SLC4A2P04920 1241 aa14.1□□□□□ -0.15
FARP1-201ENST00000319562 HSPA4P34932 840 aa14.1□□□□□ -0.15
FARP1-201ENST00000319562 BMS1Q14692 1282 aaKnown RBP14.1□□□□□ -0.15
FARP1-201ENST00000319562 CEP112Q8N8E3 955 aa14.1□□□□□ -0.15
FARP1-201ENST00000319562 CTNNA2P26232 953 aa14.1□□□□□ -0.15
FARP1-201ENST00000319562 CAMK4Q16566 473 aa14.1□□□□□ -0.15
FARP1-201ENST00000319562 HDGFL1Q5TGJ6 251 aa14.1□□□□□ -0.15
FARP1-201ENST00000319562 CCDC196A0A1B0GTZ2 297 aa14.1□□□□□ -0.15
FARP1-201ENST00000319562 KIF20AO95235 890 aa14.1□□□□□ -0.15
FARP1-201ENST00000319562 IVLP07476 585 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms