RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 DCTN1Q14203 1278 aa9.09□□□□□ -0.95
CDHR3-201ENST00000317716 TESK2Q96S53 571 aa9.09□□□□□ -0.95
CDHR3-201ENST00000317716 CHMP4AQ9BY43 222 aa9.09□□□□□ -0.95
CDHR3-201ENST00000317716 ANTXR1Q9H6X2 564 aa9.09□□□□□ -0.95
CDHR3-201ENST00000317716 HMGN5P82970 282 aaKnown RBP9.09□□□□□ -0.95
CDHR3-201ENST00000317716 PKP1Q13835 747 aa9.09□□□□□ -0.95
CDHR3-201ENST00000317716 C16orf45Q96MC5 204 aaPredicted RBP9.09□□□□□ -0.95
CDHR3-201ENST00000317716 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.09□□□□□ -0.95
CDHR3-201ENST00000317716 V9GYY5 206 aaPredicted RBP9.09□□□□□ -0.95
CDHR3-201ENST00000317716 NRDCO43847 1150 aa9.08□□□□□ -0.96
CDHR3-201ENST00000317716 CFAP44Q96MT7 982 aa9.08□□□□□ -0.96
CDHR3-201ENST00000317716 ARHGEF40Q8TER5 1519 aa9.08□□□□□ -0.96
CDHR3-201ENST00000317716 KDM5DQ9BY66 1539 aa9.08□□□□□ -0.96
CDHR3-201ENST00000317716 UBAP1LF5GYI3 381 aa9.08□□□□□ -0.96
CDHR3-201ENST00000317716 RAB3GAP1Q15042 981 aa9.08□□□□□ -0.96
CDHR3-201ENST00000317716 FMNL2Q96PY5 1086 aa9.08□□□□□ -0.96
CDHR3-201ENST00000317716 C14orf93Q9H972 538 aaKnown RBP9.08□□□□□ -0.96
CDHR3-201ENST00000317716 EXOC6BQ9Y2D4 811 aa9.08□□□□□ -0.96
CDHR3-201ENST00000317716 ZKSCAN5Q9Y2L8 839 aa9.08□□□□□ -0.96
CDHR3-201ENST00000317716 MADDQ8WXG6 1647 aa9.08□□□□□ -0.96
CDHR3-201ENST00000317716 FSD2A1L4K1 749 aa9.08□□□□□ -0.96
CDHR3-201ENST00000317716 CD2BP2O95400 341 aaKnown RBP9.08□□□□□ -0.96
CDHR3-201ENST00000317716 WDR63Q8IWG1 891 aa9.08□□□□□ -0.96
CDHR3-201ENST00000317716 ZFP91Q96JP5 570 aaPredicted RBP9.08□□□□□ -0.96
CDHR3-201ENST00000317716 STK31Q9BXU1 1019 aa9.08□□□□□ -0.96
CDHR3-201ENST00000317716 PTPRMP28827 1452 aa9.08□□□□□ -0.96
CDHR3-201ENST00000317716 ERVK-7P63135 1459 aa9.08□□□□□ -0.96
CDHR3-201ENST00000317716 TMEM2Q9UHN6 1383 aa9.07□□□□□ -0.96
CDHR3-201ENST00000317716 TMPOP42166 694 aaKnown RBP9.07□□□□□ -0.96
CDHR3-201ENST00000317716 TWISTNBQ3B726 338 aaPredicted RBP9.07□□□□□ -0.96
CDHR3-201ENST00000317716 NGEFQ8N5V2 710 aa9.07□□□□□ -0.96
CDHR3-201ENST00000317716 GPRASP1Q5JY77 1395 aa9.07□□□□□ -0.96
CDHR3-201ENST00000317716 HOMER1Q86YM7 354 aa9.07□□□□□ -0.96
CDHR3-201ENST00000317716 SPATA31E1Q6ZUB1 1445 aa9.07□□□□□ -0.96
CDHR3-201ENST00000317716 PLXNC1O60486 1568 aa9.07□□□□□ -0.96
CDHR3-201ENST00000317716 DYNC1I1O14576 645 aa9.07□□□□□ -0.96
CDHR3-201ENST00000317716 ADCY5O95622 1261 aa9.07□□□□□ -0.96
CDHR3-201ENST00000317716 RPGRIP1LQ68CZ1 1315 aa9.06□□□□□ -0.96
CDHR3-201ENST00000317716 AAMPQ13685 434 aa9.06□□□□□ -0.96
CDHR3-201ENST00000317716 FILIP1Q7Z7B0 1213 aa9.06□□□□□ -0.96
CDHR3-201ENST00000317716 API5Q9BZZ5 524 aaKnown RBP9.06□□□□□ -0.96
CDHR3-201ENST00000317716 IL1RAPL2Q9NP60 686 aa9.06□□□□□ -0.96
CDHR3-201ENST00000317716 GCC1Q96CN9 775 aa9.06□□□□□ -0.96
CDHR3-201ENST00000317716 METP08581 1390 aa9.06□□□□□ -0.96
CDHR3-201ENST00000317716 FKBP5Q13451 457 aaPredicted RBP9.06□□□□□ -0.96
CDHR3-201ENST00000317716 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.06□□□□□ -0.96
CDHR3-201ENST00000317716 NSD3Q9BZ95 1437 aa9.05□□□□□ -0.96
CDHR3-201ENST00000317716 KDM4AO75164 1064 aa9.05□□□□□ -0.96
CDHR3-201ENST00000317716 GIMAP6Q6P9H5 292 aa9.05□□□□□ -0.96
CDHR3-201ENST00000317716 CREBRFQ8IUR6 639 aa9.05□□□□□ -0.96
CDHR3-201ENST00000317716 ORAI2Q96SN7 254 aa9.05□□□□□ -0.96
CDHR3-201ENST00000317716 MIS18AQ9NYP9 233 aa9.05□□□□□ -0.96
CDHR3-201ENST00000317716 EIF2S2P20042 333 aaKnown RBP9.05□□□□□ -0.96
CDHR3-201ENST00000317716 STK3Q13188 491 aa9.05□□□□□ -0.96
CDHR3-201ENST00000317716 CKAP2LQ8IYA6 745 aa9.05□□□□□ -0.96
CDHR3-201ENST00000317716 FAM177A1Q8N128 213 aaPredicted RBP9.05□□□□□ -0.96
CDHR3-201ENST00000317716 H3BQV1 296 aa9.05□□□□□ -0.96
CDHR3-201ENST00000317716 ERC2O15083 957 aa9.05□□□□□ -0.96
CDHR3-201ENST00000317716 IFFO2Q5TF58 517 aa9.05□□□□□ -0.96
CDHR3-201ENST00000317716 NUDT16Q96DE0 195 aaKnown RBP9.05□□□□□ -0.96
CDHR3-201ENST00000317716 AMPHP49418 695 aa9.04□□□□□ -0.96
CDHR3-201ENST00000317716 CCDC112Q8NEF3 446 aa9.04□□□□□ -0.96
CDHR3-201ENST00000317716 TRMT1Q9NXH9 659 aaKnown RBP9.04□□□□□ -0.96
CDHR3-201ENST00000317716 PPFIA3O75145 1194 aa9.04□□□□□ -0.96
CDHR3-201ENST00000317716 U2AF2P26368 475 aaKnown RBP eCLIP9.04□□□□□ -0.96
CDHR3-201ENST00000317716 NLRP6P59044 892 aa9.04□□□□□ -0.96
CDHR3-201ENST00000317716 NOLC1Q14978 699 aaKnown RBP eCLIP9.04□□□□□ -0.96
CDHR3-201ENST00000317716 SMC5Q8IY18 1101 aa9.04□□□□□ -0.96
CDHR3-201ENST00000317716 CABLES1Q8TDN4 633 aa9.04□□□□□ -0.96
CDHR3-201ENST00000317716 KAT6BQ8WYB5 2073 aa9.04□□□□□ -0.96
CDHR3-201ENST00000317716 E9PCH4 1651 aa9.04□□□□□ -0.96
CDHR3-201ENST00000317716 PDE4CQ08493 712 aa9.04□□□□□ -0.96
CDHR3-201ENST00000317716 RRS1Q15050 365 aaKnown RBP9.04□□□□□ -0.96
CDHR3-201ENST00000317716 ABTB2Q8N961 1025 aa9.04□□□□□ -0.96
CDHR3-201ENST00000317716 OTUD7AQ8TE49 926 aaPredicted RBP9.04□□□□□ -0.96
CDHR3-201ENST00000317716 ATP6V1DQ9Y5K8 247 aa9.04□□□□□ -0.96
CDHR3-201ENST00000317716 ZC3H6P61129 1189 aaKnown RBP9.03□□□□□ -0.96
CDHR3-201ENST00000317716 LRSAM1Q6UWE0 723 aa9.03□□□□□ -0.96
CDHR3-201ENST00000317716 CWC22Q9HCG8 908 aaKnown RBP9.03□□□□□ -0.96
CDHR3-201ENST00000317716 EFCAB6Q5THR3 1501 aa9.03□□□□□ -0.96
CDHR3-201ENST00000317716 ADAMTS2O95450 1211 aa9.03□□□□□ -0.96
CDHR3-201ENST00000317716 CSB-PGBD3P0DP91 1061 aa9.03□□□□□ -0.96
CDHR3-201ENST00000317716 BMP2KLQ5H9B9 411 aa9.03□□□□□ -0.96
CDHR3-201ENST00000317716 ZRANB1Q9UGI0 708 aa9.03□□□□□ -0.96
CDHR3-201ENST00000317716 ATAD2Q6PL18 1390 aa9.03□□□□□ -0.96
CDHR3-201ENST00000317716 NUCB1Q02818 461 aa9.03□□□□□ -0.96
CDHR3-201ENST00000317716 SF3A1Q15459 793 aaKnown RBP9.03□□□□□ -0.96
CDHR3-201ENST00000317716 CARD14Q9BXL6 1004 aa9.03□□□□□ -0.96
CDHR3-201ENST00000317716 NINLQ9Y2I6 1382 aa9.03□□□□□ -0.96
CDHR3-201ENST00000317716 F6X3S4 739 aa9.02□□□□□ -0.96
CDHR3-201ENST00000317716 GNAI1P63096 354 aa9.02□□□□□ -0.96
CDHR3-201ENST00000317716 COG3Q96JB2 828 aa9.02□□□□□ -0.97
CDHR3-201ENST00000317716 TMEM63CQ9P1W3 806 aa9.02□□□□□ -0.97
CDHR3-201ENST00000317716 NOL7Q9UMY1 257 aaKnown RBP9.02□□□□□ -0.97
CDHR3-201ENST00000317716 PRAG1Q86YV5 1406 aa9.02□□□□□ -0.97
CDHR3-201ENST00000317716 CLTCL1P53675 1640 aa9.02□□□□□ -0.97
CDHR3-201ENST00000317716 POLR3GO15318 223 aaPredicted RBP9.01□□□□□ -0.97
CDHR3-201ENST00000317716 SLC4A2P04920 1241 aa9.01□□□□□ -0.97
CDHR3-201ENST00000317716 CCDC83Q8IWF9 413 aa9.01□□□□□ -0.97
CDHR3-201ENST00000317716 FAM184AQ8NB25 1140 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms