RNA–Protein interactions for RNA: ENST00000311925.6

CCL19-201, Transcript of C-C motif chemokine ligand 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL19, Length 687 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19-201ENST00000311925 FAM98CQ17RN3 349 aaKnown RBP18.65■□□□□ 0.58
CCL19-201ENST00000311925 SULT6B1Q6IMI4 303 aa18.65■□□□□ 0.58
CCL19-201ENST00000311925 SPATA31A1Q5TZJ5 1347 aa18.65■□□□□ 0.58
CCL19-201ENST00000311925 CAMTA1Q9Y6Y1 1673 aa18.64■□□□□ 0.57
CCL19-201ENST00000311925 NEUROD2Q15784 382 aa18.64■□□□□ 0.57
CCL19-201ENST00000311925 TRMT2AQ8IZ69 625 aaKnown RBP18.64■□□□□ 0.57
CCL19-201ENST00000311925 RIPK4P57078 832 aa18.63■□□□□ 0.57
CCL19-201ENST00000311925 CALD1Q05682 793 aaKnown RBP18.63■□□□□ 0.57
CCL19-201ENST00000311925 CDCA7LQ96GN5 454 aa18.63■□□□□ 0.57
CCL19-201ENST00000311925 EYA1Q99502 592 aa18.63■□□□□ 0.57
CCL19-201ENST00000311925 IL16Q14005 1332 aa18.63■□□□□ 0.57
CCL19-201ENST00000311925 RRP7AQ9Y3A4 280 aaKnown RBP18.62■□□□□ 0.57
CCL19-201ENST00000311925 DUSP27Q5VZP5 1158 aa18.61■□□□□ 0.57
CCL19-201ENST00000311925 MYH16Q9H6N6 1097 aa18.61■□□□□ 0.57
CCL19-201ENST00000311925 SUPT16HQ9Y5B9 1047 aaKnown RBP18.61■□□□□ 0.57
CCL19-201ENST00000311925 BARGINQ6ZT62 677 aa18.6■□□□□ 0.57
CCL19-201ENST00000311925 PHACTR3Q96KR7 559 aa18.59■□□□□ 0.57
CCL19-201ENST00000311925 TRIM35Q9UPQ4 493 aa18.59■□□□□ 0.57
CCL19-201ENST00000311925 COL5A2P05997 1499 aaPredicted RBP18.58■□□□□ 0.57
CCL19-201ENST00000311925 ZBTB7CA1YPR0 619 aa18.58■□□□□ 0.56
CCL19-201ENST00000311925 AEBP1Q8IUX7 1158 aa18.58■□□□□ 0.56
CCL19-201ENST00000311925 RCAN3Q9UKA8 241 aa18.58■□□□□ 0.56
CCL19-201ENST00000311925 GAS2L2Q8NHY3 880 aa18.57■□□□□ 0.56
CCL19-201ENST00000311925 LTV1Q96GA3 475 aaPredicted RBP18.57■□□□□ 0.56
CCL19-201ENST00000311925 STRN4Q9NRL3 753 aa18.57■□□□□ 0.56
CCL19-201ENST00000311925 COL18A1P39060 1754 aa18.57■□□□□ 0.56
CCL19-201ENST00000311925 FAM208AQ9UK61 1670 aaKnown RBP18.57■□□□□ 0.56
CCL19-201ENST00000311925 RNF123Q5XPI4 1314 aa18.56■□□□□ 0.56
CCL19-201ENST00000311925 ERICH6BQ5W0A0 696 aa18.56■□□□□ 0.56
CCL19-201ENST00000311925 LARP1Q6PKG0 1096 aaKnown RBP18.56■□□□□ 0.56
CCL19-201ENST00000311925 ANKRD24Q8TF21 1146 aa18.56■□□□□ 0.56
CCL19-201ENST00000311925 THRAP3Q9Y2W1 955 aaKnown RBP18.56■□□□□ 0.56
CCL19-201ENST00000311925 NCAPD2Q15021 1401 aa18.56■□□□□ 0.56
CCL19-201ENST00000311925 EVA1CP58658 441 aa18.55■□□□□ 0.56
CCL19-201ENST00000311925 PLEKHG2Q9H7P9 1386 aa18.55■□□□□ 0.56
CCL19-201ENST00000311925 A0A0G2JS52 829 aa18.54■□□□□ 0.56
CCL19-201ENST00000311925 HTATSF1O43719 755 aaKnown RBP18.54■□□□□ 0.56
CCL19-201ENST00000311925 MYT1Q01538 1121 aa18.54■□□□□ 0.56
CCL19-201ENST00000311925 ERBB3P21860 1342 aa18.53■□□□□ 0.56
CCL19-201ENST00000311925 DLG5Q8TDM6 1919 aa18.53■□□□□ 0.56
CCL19-201ENST00000311925 CT47B1P0C2W7 299 aaPredicted RBP18.53■□□□□ 0.56
CCL19-201ENST00000311925 DEFB132Q7Z7B7 95 aa18.53■□□□□ 0.56
CCL19-201ENST00000311925 SPINK5Q9NQ38 1064 aaPredicted RBP18.53■□□□□ 0.56
CCL19-201ENST00000311925 DISP2A7MBM2 1401 aa18.52■□□□□ 0.56
CCL19-201ENST00000311925 CRB1P82279 1406 aa18.52■□□□□ 0.56
CCL19-201ENST00000311925 NBPF6Q5VWK0 638 aa18.52■□□□□ 0.56
CCL19-201ENST00000311925 NBPF4Q96M43 638 aa18.52■□□□□ 0.56
CCL19-201ENST00000311925 AXIN2Q9Y2T1 843 aa18.52■□□□□ 0.56
CCL19-201ENST00000311925 RGPD5Q99666 1765 aa18.51■□□□□ 0.55
CCL19-201ENST00000311925 GNAI1P63096 354 aa18.51■□□□□ 0.55
CCL19-201ENST00000311925 SF3B2Q13435 895 aaKnown RBP18.51■□□□□ 0.55
CCL19-201ENST00000311925 AMOTQ4VCS5 1084 aa18.5■□□□□ 0.55
CCL19-201ENST00000311925 RTF1Q92541 710 aaKnown RBP18.5■□□□□ 0.55
CCL19-201ENST00000311925 IFT57Q9NWB7 429 aa18.5■□□□□ 0.55
CCL19-201ENST00000311925 FKBP8Q14318 412 aa18.49■□□□□ 0.55
CCL19-201ENST00000311925 FAM182BQ5T319 152 aa18.49■□□□□ 0.55
CCL19-201ENST00000311925 FAM196AQ6ZSG2 479 aa18.49■□□□□ 0.55
CCL19-201ENST00000311925 USP35Q9P2H5 1018 aa18.49■□□□□ 0.55
CCL19-201ENST00000311925 PARP4Q9UKK3 1724 aaKnown RBP18.49■□□□□ 0.55
CCL19-201ENST00000311925 MTHFSDQ2M296 383 aaKnown RBP18.48■□□□□ 0.55
CCL19-201ENST00000311925 PLEKHO1Q53GL0 409 aaPredicted RBP18.48■□□□□ 0.55
CCL19-201ENST00000311925 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.48■□□□□ 0.55
CCL19-201ENST00000311925 WDR17Q8IZU2 1322 aa18.48■□□□□ 0.55
CCL19-201ENST00000311925 RGPD2P0DJD1 1756 aa18.47■□□□□ 0.55
CCL19-201ENST00000311925 TNS1Q9HBL0 1735 aaKnown RBP18.47■□□□□ 0.55
CCL19-201ENST00000311925 CSB-PGBD3P0DP91 1061 aa18.47■□□□□ 0.55
CCL19-201ENST00000311925 BAG6P46379 1132 aa18.47■□□□□ 0.55
CCL19-201ENST00000311925 CFAP44Q96MT7 982 aa18.47■□□□□ 0.55
CCL19-201ENST00000311925 FANCIQ9NVI1 1328 aa18.47■□□□□ 0.55
CCL19-201ENST00000311925 GNAT3A8MTJ3 354 aa18.46■□□□□ 0.55
CCL19-201ENST00000311925 RRP1P56182 461 aaKnown RBP18.46■□□□□ 0.55
CCL19-201ENST00000311925 ZNF853P0CG23 659 aa18.45■□□□□ 0.54
CCL19-201ENST00000311925 USHBP1Q8N6Y0 703 aa18.45■□□□□ 0.54
CCL19-201ENST00000311925 ZNF428Q96B54 188 aa18.45■□□□□ 0.54
CCL19-201ENST00000311925 NLRP2Q9NX02 1062 aa18.45■□□□□ 0.54
CCL19-201ENST00000311925 MAP3K5Q99683 1374 aa18.44■□□□□ 0.54
CCL19-201ENST00000311925 RAPGEF4Q8WZA2 1011 aa18.44■□□□□ 0.54
CCL19-201ENST00000311925 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.44■□□□□ 0.54
CCL19-201ENST00000311925 CARD10Q9BWT7 1032 aa18.43■□□□□ 0.54
CCL19-201ENST00000311925 BABAM1Q9NWV8 329 aa18.43■□□□□ 0.54
CCL19-201ENST00000311925 TATP17735 454 aaPredicted RBP18.42■□□□□ 0.54
CCL19-201ENST00000311925 AKAP4Q5JQC9 854 aa18.42■□□□□ 0.54
CCL19-201ENST00000311925 TOM1L2Q6ZVM7 507 aa18.42■□□□□ 0.54
CCL19-201ENST00000311925 CAMKK2Q96RR4 588 aa18.42■□□□□ 0.54
CCL19-201ENST00000311925 CDCA7Q9BWT1 371 aaPredicted RBP18.42■□□□□ 0.54
CCL19-201ENST00000311925 EN1Q05925 392 aaPredicted RBP18.41■□□□□ 0.54
CCL19-201ENST00000311925 BCL9O00512 1426 aa18.4■□□□□ 0.54
CCL19-201ENST00000311925 WNK3Q9BYP7 1800 aa18.4■□□□□ 0.54
CCL19-201ENST00000311925 TRIM37O94972 964 aa18.4■□□□□ 0.54
CCL19-201ENST00000311925 C1orf141Q5JVX7 400 aa18.4■□□□□ 0.54
CCL19-201ENST00000311925 TSR2Q969E8 191 aaKnown RBP18.4■□□□□ 0.54
CCL19-201ENST00000311925 SPG7Q9UQ90 795 aa18.4■□□□□ 0.54
CCL19-201ENST00000311925 LAS1LQ9Y4W2 734 aaKnown RBP18.4■□□□□ 0.54
CCL19-201ENST00000311925 LRRC37A3O60309 1634 aa18.4■□□□□ 0.54
CCL19-201ENST00000311925 OVOS2A0A0G2JMS6 1433 aa18.4■□□□□ 0.54
CCL19-201ENST00000311925 CHL1O00533 1208 aa18.39■□□□□ 0.53
CCL19-201ENST00000311925 EXOSC9Q06265 439 aaKnown RBP18.39■□□□□ 0.53
CCL19-201ENST00000311925 MCM10Q7L590 875 aa18.39■□□□□ 0.53
CCL19-201ENST00000311925 THUMPD2Q9BTF0 503 aaKnown RBP18.39■□□□□ 0.53
CCL19-201ENST00000311925 RARSP54136 660 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms