RNA–Protein interactions for RNA: ENST00000310169.2

CHRNA9-201, Transcript of cholinergic receptor nicotinic alpha 9 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA9, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9-201ENST00000310169 PARP4Q9UKK3 1724 aaKnown RBP13.07□□□□□ -0.32
CHRNA9-201ENST00000310169 PPP2R1AP30153 589 aa13.06□□□□□ -0.32
CHRNA9-201ENST00000310169 WNK3Q9BYP7 1800 aa13.06□□□□□ -0.32
CHRNA9-201ENST00000310169 ANP32CO43423 234 aa13.06□□□□□ -0.32
CHRNA9-201ENST00000310169 DIAPH1O60610 1272 aaKnown RBP13.06□□□□□ -0.32
CHRNA9-201ENST00000310169 TATP17735 454 aaPredicted RBP13.06□□□□□ -0.32
CHRNA9-201ENST00000310169 RALBP1Q15311 655 aa13.05□□□□□ -0.32
CHRNA9-201ENST00000310169 FAM196AQ6ZSG2 479 aa13.05□□□□□ -0.32
CHRNA9-201ENST00000310169 DISP2A7MBM2 1401 aa13.05□□□□□ -0.32
CHRNA9-201ENST00000310169 DDX54Q8TDD1 881 aaKnown RBP13.05□□□□□ -0.32
CHRNA9-201ENST00000310169 UPF1Q92900 1129 aaKnown RBP eCLIP13.04□□□□□ -0.32
CHRNA9-201ENST00000310169 ANO8Q9HCE9 1232 aaPredicted RBP13.04□□□□□ -0.32
CHRNA9-201ENST00000310169 PARD3Q8TEW0 1356 aa13.04□□□□□ -0.32
CHRNA9-201ENST00000310169 IL13P35225 146 aa13.04□□□□□ -0.32
CHRNA9-201ENST00000310169 SF3B2Q13435 895 aaKnown RBP13.04□□□□□ -0.32
CHRNA9-201ENST00000310169 ZCRB1Q8TBF4 217 aaKnown RBP13.04□□□□□ -0.32
CHRNA9-201ENST00000310169 LRRC37A3O60309 1634 aa13.03□□□□□ -0.32
CHRNA9-201ENST00000310169 U2SURPO15042 1029 aaKnown RBP13.03□□□□□ -0.32
CHRNA9-201ENST00000310169 SULT6B1Q6IMI4 303 aa13.02□□□□□ -0.32
CHRNA9-201ENST00000310169 MARCH10Q8NA82 808 aaPredicted RBP13.02□□□□□ -0.32
CHRNA9-201ENST00000310169 IGSF1Q8N6C5 1336 aa13.02□□□□□ -0.32
CHRNA9-201ENST00000310169 TNS2Q63HR2 1409 aa13.02□□□□□ -0.32
CHRNA9-201ENST00000310169 CCDC125Q86Z20 511 aa13.02□□□□□ -0.33
CHRNA9-201ENST00000310169 NUDCQ9Y266 331 aa13.02□□□□□ -0.33
CHRNA9-201ENST00000310169 MEGF6O75095 1541 aa13.02□□□□□ -0.33
CHRNA9-201ENST00000310169 OVOS2A0A0G2JMS6 1433 aa13.01□□□□□ -0.33
CHRNA9-201ENST00000310169 TRIM37O94972 964 aa13.01□□□□□ -0.33
CHRNA9-201ENST00000310169 SPG7Q9UQ90 795 aa13.01□□□□□ -0.33
CHRNA9-201ENST00000310169 HMOX1P09601 288 aa13□□□□□ -0.33
CHRNA9-201ENST00000310169 MYBBP1AQ9BQG0 1328 aaKnown RBP13□□□□□ -0.33
CHRNA9-201ENST00000310169 AEBP1Q8IUX7 1158 aa13□□□□□ -0.33
CHRNA9-201ENST00000310169 UBE2Q2Q8WVN8 375 aa13□□□□□ -0.33
CHRNA9-201ENST00000310169 PRKRIP1Q9H875 184 aaPredicted RBP13□□□□□ -0.33
CHRNA9-201ENST00000310169 NCAPD2Q15021 1401 aa12.99□□□□□ -0.33
CHRNA9-201ENST00000310169 PCDH11XQ9BZA7 1347 aa12.99□□□□□ -0.33
CHRNA9-201ENST00000310169 PCDH11YQ9BZA8 1340 aa12.99□□□□□ -0.33
CHRNA9-201ENST00000310169 U2AF1L5P0DN76 240 aaPredicted RBP12.98□□□□□ -0.33
CHRNA9-201ENST00000310169 U2AF1Q01081 240 aaKnown RBP eCLIP12.98□□□□□ -0.33
CHRNA9-201ENST00000310169 PLEKHO1Q53GL0 409 aaPredicted RBP12.97□□□□□ -0.33
CHRNA9-201ENST00000310169 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.97□□□□□ -0.33
CHRNA9-201ENST00000310169 AMOTQ4VCS5 1084 aa12.97□□□□□ -0.33
CHRNA9-201ENST00000310169 ACSBG1Q96GR2 724 aa12.97□□□□□ -0.33
CHRNA9-201ENST00000310169 COL3A1P02461 1466 aaPredicted RBP12.96□□□□□ -0.33
CHRNA9-201ENST00000310169 SYTL4Q96C24 671 aaPredicted RBP12.96□□□□□ -0.33
CHRNA9-201ENST00000310169 RGPD1P0DJD0 1748 aa12.96□□□□□ -0.33
CHRNA9-201ENST00000310169 APBA3O96018 575 aa12.96□□□□□ -0.34
CHRNA9-201ENST00000310169 BAG6P46379 1132 aa12.96□□□□□ -0.34
CHRNA9-201ENST00000310169 KDRP35968 1356 aa12.96□□□□□ -0.34
CHRNA9-201ENST00000310169 CYP27B1O15528 508 aa12.95□□□□□ -0.34
CHRNA9-201ENST00000310169 IFNL2Q8IZJ0 200 aa12.95□□□□□ -0.34
CHRNA9-201ENST00000310169 SBF2Q86WG5 1849 aa12.95□□□□□ -0.34
CHRNA9-201ENST00000310169 BCL11BQ9C0K0 894 aaPredicted RBP12.95□□□□□ -0.34
CHRNA9-201ENST00000310169 KCNQ2O43526 872 aa12.94□□□□□ -0.34
CHRNA9-201ENST00000310169 C1orf141Q5JVX7 400 aa12.94□□□□□ -0.34
CHRNA9-201ENST00000310169 ZNF530Q6P9A1 599 aaPredicted RBP12.94□□□□□ -0.34
CHRNA9-201ENST00000310169 DEFB132Q7Z7B7 95 aa12.94□□□□□ -0.34
CHRNA9-201ENST00000310169 BCL9O00512 1426 aa12.94□□□□□ -0.34
CHRNA9-201ENST00000310169 SHANK3Q9BYB0 1731 aa12.94□□□□□ -0.34
CHRNA9-201ENST00000310169 PKD1L3Q7Z443 1732 aa12.93□□□□□ -0.34
CHRNA9-201ENST00000310169 NEFMP07197 916 aa12.93□□□□□ -0.34
CHRNA9-201ENST00000310169 PRIM1P49642 420 aaKnown RBP12.93□□□□□ -0.34
CHRNA9-201ENST00000310169 PLEKHG2Q9H7P9 1386 aa12.92□□□□□ -0.34
CHRNA9-201ENST00000310169 PHKG2P15735 406 aa12.92□□□□□ -0.34
CHRNA9-201ENST00000310169 EN1Q05925 392 aaPredicted RBP12.92□□□□□ -0.34
CHRNA9-201ENST00000310169 FCHSD2O94868 740 aa12.92□□□□□ -0.34
CHRNA9-201ENST00000310169 HSP90AB1P08238 724 aaKnown RBP12.92□□□□□ -0.34
CHRNA9-201ENST00000310169 PRKAR2BP31323 418 aa12.92□□□□□ -0.34
CHRNA9-201ENST00000310169 PTF1AQ7RTS3 328 aa12.92□□□□□ -0.34
CHRNA9-201ENST00000310169 WDR43Q15061 677 aaKnown RBP eCLIP12.91□□□□□ -0.34
CHRNA9-201ENST00000310169 RSPH6AQ9H0K4 717 aa12.91□□□□□ -0.34
CHRNA9-201ENST00000310169 PNNQ9H307 717 aaKnown RBP12.91□□□□□ -0.34
CHRNA9-201ENST00000310169 NKX1-1Q15270 411 aaPredicted RBP12.9□□□□□ -0.34
CHRNA9-201ENST00000310169 MPRIPQ6WCQ1 1025 aa12.9□□□□□ -0.34
CHRNA9-201ENST00000310169 MTHFSDQ2M296 383 aaKnown RBP12.9□□□□□ -0.35
CHRNA9-201ENST00000310169 TNS1Q9HBL0 1735 aaKnown RBP12.9□□□□□ -0.35
CHRNA9-201ENST00000310169 DOT1LQ8TEK3 1739 aa12.89□□□□□ -0.35
CHRNA9-201ENST00000310169 AKAP4Q5JQC9 854 aa12.89□□□□□ -0.35
CHRNA9-201ENST00000310169 GAS2L2Q8NHY3 880 aa12.89□□□□□ -0.35
CHRNA9-201ENST00000310169 DCAF5Q96JK2 942 aa12.89□□□□□ -0.35
CHRNA9-201ENST00000310169 EZH2Q15910 746 aaKnown RBP12.88□□□□□ -0.35
CHRNA9-201ENST00000310169 PPP4R2Q9NY27 417 aa12.88□□□□□ -0.35
CHRNA9-201ENST00000310169 NHSQ6T4R5 1651 aa12.88□□□□□ -0.35
CHRNA9-201ENST00000310169 PLSCR1O15162 318 aa12.88□□□□□ -0.35
CHRNA9-201ENST00000310169 PHACTR3Q96KR7 559 aa12.88□□□□□ -0.35
CHRNA9-201ENST00000310169 TMOD3Q9NYL9 352 aa12.87□□□□□ -0.35
CHRNA9-201ENST00000310169 MAPK8IP3Q9UPT6 1336 aa12.87□□□□□ -0.35
CHRNA9-201ENST00000310169 CAMKK2Q96RR4 588 aa12.87□□□□□ -0.35
CHRNA9-201ENST00000310169 BTAF1O14981 1849 aa12.87□□□□□ -0.35
CHRNA9-201ENST00000310169 ERVV-2B6SEH9 535 aa12.86□□□□□ -0.35
CHRNA9-201ENST00000310169 CABP4P57796 275 aa12.86□□□□□ -0.35
CHRNA9-201ENST00000310169 MRS2Q9HD23 443 aa12.86□□□□□ -0.35
CHRNA9-201ENST00000310169 ITGB4P16144 1822 aa12.86□□□□□ -0.35
CHRNA9-201ENST00000310169 GNAT3A8MTJ3 354 aa12.86□□□□□ -0.35
CHRNA9-201ENST00000310169 PIGBQ92521 554 aa12.85□□□□□ -0.35
CHRNA9-201ENST00000310169 ADAMTS8Q9UP79 889 aa12.85□□□□□ -0.35
CHRNA9-201ENST00000310169 RTF1Q92541 710 aaKnown RBP12.85□□□□□ -0.35
CHRNA9-201ENST00000310169 MSH5O43196 834 aa12.84□□□□□ -0.35
CHRNA9-201ENST00000310169 TXNRD1Q16881 649 aa12.84□□□□□ -0.35
CHRNA9-201ENST00000310169 CCDC184Q52MB2 194 aa12.84□□□□□ -0.35
CHRNA9-201ENST00000310169 NFATC2IPQ8NCF5 419 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms