RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 DCTN1Q14203 1278 aa30.27■■■□□ 2.44
SNCB-201ENST00000310112 ANKRD24Q8TF21 1146 aa30.27■■■□□ 2.44
SNCB-201ENST00000310112 PLEKHG2Q9H7P9 1386 aa30.27■■■□□ 2.44
SNCB-201ENST00000310112 TSHZ2Q9NRE2 1034 aa30.27■■■□□ 2.44
SNCB-201ENST00000310112 CRYBG1Q9Y4K1 1723 aa30.27■■■□□ 2.44
SNCB-201ENST00000310112 CPDO75976 1380 aa30.26■■■□□ 2.43
SNCB-201ENST00000310112 ZBTB7CA1YPR0 619 aa30.26■■■□□ 2.43
SNCB-201ENST00000310112 MCM10Q7L590 875 aa30.26■■■□□ 2.43
SNCB-201ENST00000310112 BCL2L13Q9BXK5 485 aa30.26■■■□□ 2.43
SNCB-201ENST00000310112 TWISTNBQ3B726 338 aaPredicted RBP30.25■■■□□ 2.43
SNCB-201ENST00000310112 DZIP1LQ8IYY4 767 aaKnown RBP30.25■■■□□ 2.43
SNCB-201ENST00000310112 AMOTQ4VCS5 1084 aa30.24■■■□□ 2.43
SNCB-201ENST00000310112 ATF7IPQ6VMQ6 1270 aa30.24■■■□□ 2.43
SNCB-201ENST00000310112 CENPQQ7L2Z9 268 aaPredicted RBP30.24■■■□□ 2.43
SNCB-201ENST00000310112 ARHGAP45Q92619 1136 aa30.24■■■□□ 2.43
SNCB-201ENST00000310112 PANK1Q8TE04 598 aa30.23■■■□□ 2.43
SNCB-201ENST00000310112 DDX17Q92841 729 aaKnown RBP30.23■■■□□ 2.43
SNCB-201ENST00000310112 FAM208AQ9UK61 1670 aaKnown RBP30.22■■■□□ 2.43
SNCB-201ENST00000310112 PLEKHO1Q53GL0 409 aaPredicted RBP30.22■■■□□ 2.43
SNCB-201ENST00000310112 FTSJ3Q8IY81 847 aaKnown RBP30.22■■■□□ 2.43
SNCB-201ENST00000310112 COL18A1P39060 1754 aa30.21■■■□□ 2.43
SNCB-201ENST00000310112 CLUAP1Q96AJ1 413 aa30.21■■■□□ 2.43
SNCB-201ENST00000310112 COG6Q9Y2V7 657 aa30.21■■■□□ 2.43
SNCB-201ENST00000310112 LMO7Q8WWI1 1683 aa30.21■■■□□ 2.43
SNCB-201ENST00000310112 ERBB3P21860 1342 aa30.2■■■□□ 2.43
SNCB-201ENST00000310112 SOS1Q07889 1333 aaPredicted RBP30.2■■■□□ 2.43
SNCB-201ENST00000310112 NHSL1Q5SYE7 1610 aa30.19■■■□□ 2.42
SNCB-201ENST00000310112 RGPD2P0DJD1 1756 aa30.19■■■□□ 2.42
SNCB-201ENST00000310112 MVPQ14764 893 aaKnown RBP30.19■■■□□ 2.42
SNCB-201ENST00000310112 KDM2BQ8NHM5 1336 aa30.19■■■□□ 2.42
SNCB-201ENST00000310112 ZC3H6P61129 1189 aaKnown RBP30.18■■■□□ 2.42
SNCB-201ENST00000310112 MRPL50Q8N5N7 158 aaKnown RBP30.18■■■□□ 2.42
SNCB-201ENST00000310112 USHBP1Q8N6Y0 703 aa30.18■■■□□ 2.42
SNCB-201ENST00000310112 NOB1Q9ULX3 412 aaKnown RBP30.18■■■□□ 2.42
SNCB-201ENST00000310112 TRIM27P14373 513 aa30.17■■■□□ 2.42
SNCB-201ENST00000310112 TSPYL6Q8N831 410 aa30.17■■■□□ 2.42
SNCB-201ENST00000310112 C8orf58Q8NAV2 365 aa30.17■■■□□ 2.42
SNCB-201ENST00000310112 RLBP1P12271 317 aa30.16■■■□□ 2.42
SNCB-201ENST00000310112 AXIN2Q9Y2T1 843 aa30.16■■■□□ 2.42
SNCB-201ENST00000310112 OVOS2A0A0G2JMS6 1433 aa30.16■■■□□ 2.42
SNCB-201ENST00000310112 LRRC59Q96AG4 307 aaKnown RBP30.15■■■□□ 2.42
SNCB-201ENST00000310112 CHMP4BQ9H444 224 aaKnown RBP30.15■■■□□ 2.42
SNCB-201ENST00000310112 DDX19BQ9UMR2 479 aa30.15■■■□□ 2.42
SNCB-201ENST00000310112 RGPD5Q99666 1765 aa30.15■■■□□ 2.42
SNCB-201ENST00000310112 AKAP4Q5JQC9 854 aa30.15■■■□□ 2.42
SNCB-201ENST00000310112 TSPYL4Q9UJ04 414 aa30.15■■■□□ 2.42
SNCB-201ENST00000310112 CEMIPQ8WUJ3 1361 aa30.14■■■□□ 2.42
SNCB-201ENST00000310112 TAF7Q15545 349 aaPredicted RBP30.12■■■□□ 2.41
SNCB-201ENST00000310112 TCERG1O14776 1098 aaKnown RBP30.11■■■□□ 2.41
SNCB-201ENST00000310112 IL17REQ8NFR9 667 aa30.11■■■□□ 2.41
SNCB-201ENST00000310112 API5Q9BZZ5 524 aaKnown RBP30.11■■■□□ 2.41
SNCB-201ENST00000310112 PLEKHG5O94827 1062 aa30.09■■■□□ 2.41
SNCB-201ENST00000310112 C1orf141Q5JVX7 400 aa30.08■■■□□ 2.41
SNCB-201ENST00000310112 ZNF530Q6P9A1 599 aaPredicted RBP30.08■■■□□ 2.41
SNCB-201ENST00000310112 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.08■■■□□ 2.41
SNCB-201ENST00000310112 TNNQ9UQP3 1299 aa30.08■■■□□ 2.41
SNCB-201ENST00000310112 ELL2O00472 640 aaPredicted RBP30.07■■■□□ 2.4
SNCB-201ENST00000310112 CHMP4AQ9BY43 222 aa30.07■■■□□ 2.4
SNCB-201ENST00000310112 CABLES1Q8TDN4 633 aa30.06■■■□□ 2.4
SNCB-201ENST00000310112 RAPGEF4Q8WZA2 1011 aa30.06■■■□□ 2.4
SNCB-201ENST00000310112 LTBP4Q8N2S1 1624 aa30.04■■■□□ 2.4
SNCB-201ENST00000310112 ABCA3Q99758 1704 aa30.04■■■□□ 2.4
SNCB-201ENST00000310112 ITPRIPQ8IWB1 547 aa30.03■■■□□ 2.4
SNCB-201ENST00000310112 NLRP2Q9NX02 1062 aa30.03■■■□□ 2.4
SNCB-201ENST00000310112 ABCC4O15439 1325 aa30.03■■■□□ 2.4
SNCB-201ENST00000310112 PTPRCP08575 1304 aa30.03■■■□□ 2.4
SNCB-201ENST00000310112 TATP17735 454 aaPredicted RBP30.03■■■□□ 2.4
SNCB-201ENST00000310112 TMEM57Q8N5G2 664 aa30.03■■■□□ 2.4
SNCB-201ENST00000310112 CSB-PGBD3P0DP91 1061 aa30.02■■■□□ 2.4
SNCB-201ENST00000310112 RWDD1Q9H446 243 aaPredicted RBP30.01■■■□□ 2.39
SNCB-201ENST00000310112 SPG7Q9UQ90 795 aa30.01■■■□□ 2.39
SNCB-201ENST00000310112 ADAMTS7Q9UKP4 1686 aa30.01■■■□□ 2.39
SNCB-201ENST00000310112 PRDM11Q9NQV5 511 aa30■■■□□ 2.39
SNCB-201ENST00000310112 AHDC1Q5TGY3 1603 aaPredicted RBP30■■■□□ 2.39
SNCB-201ENST00000310112 TEFQ10587 303 aa29.99■■■□□ 2.39
SNCB-201ENST00000310112 CACNA1FO60840 1977 aa29.98■■■□□ 2.39
SNCB-201ENST00000310112 RNMTO43148 476 aaKnown RBP29.98■■■□□ 2.39
SNCB-201ENST00000310112 HOXB7P09629 217 aa29.98■■■□□ 2.39
SNCB-201ENST00000310112 MIS18AQ9NYP9 233 aa29.98■■■□□ 2.39
SNCB-201ENST00000310112 CHRNA2Q15822 529 aa29.97■■■□□ 2.39
SNCB-201ENST00000310112 KDM3BQ7LBC6 1761 aa29.97■■■□□ 2.39
SNCB-201ENST00000310112 KRT24Q2M2I5 525 aa29.96■■■□□ 2.39
SNCB-201ENST00000310112 CCDC30Q5VVM6 783 aa29.96■■■□□ 2.39
SNCB-201ENST00000310112 ZBTB40Q9NUA8 1239 aa29.96■■■□□ 2.39
SNCB-201ENST00000310112 WDR17Q8IZU2 1322 aa29.95■■■□□ 2.39
SNCB-201ENST00000310112 STK31Q9BXU1 1019 aa29.95■■■□□ 2.39
SNCB-201ENST00000310112 PCDHB15Q9Y5E8 787 aa29.95■■■□□ 2.39
SNCB-201ENST00000310112 IGHDP01880 384 aa29.94■■■□□ 2.38
SNCB-201ENST00000310112 ROBO1Q9Y6N7 1651 aa29.93■■■□□ 2.38
SNCB-201ENST00000310112 LGR6Q9HBX8 967 aa29.93■■■□□ 2.38
SNCB-201ENST00000310112 RBM19Q9Y4C8 960 aaKnown RBP29.93■■■□□ 2.38
SNCB-201ENST00000310112 PKD1L3Q7Z443 1732 aa29.93■■■□□ 2.38
SNCB-201ENST00000310112 VIRMAQ69YN4 1812 aaKnown RBP29.93■■■□□ 2.38
SNCB-201ENST00000310112 HDAC1Q13547 482 aaPredicted RBP29.92■■■□□ 2.38
SNCB-201ENST00000310112 INTS3Q68E01 1043 aaKnown RBP29.91■■■□□ 2.38
SNCB-201ENST00000310112 COL5A2P05997 1499 aaPredicted RBP29.91■■■□□ 2.38
SNCB-201ENST00000310112 HSP90AB1P08238 724 aaKnown RBP29.9■■■□□ 2.38
SNCB-201ENST00000310112 SLC4A2P04920 1241 aa29.9■■■□□ 2.38
SNCB-201ENST00000310112 MPRIPQ6WCQ1 1025 aa29.9■■■□□ 2.38
SNCB-201ENST00000310112 IFNL2Q8IZJ0 200 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms