RNA–Protein interactions for RNA: ENST00000309859.8

GGA2-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA2, Length 5,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-201ENST00000309859 E2F4Q16254 413 aa12.82□□□□□ -0.36
GGA2-201ENST00000309859 ZNF215Q9UL58 517 aaPredicted RBP12.82□□□□□ -0.36
GGA2-201ENST00000309859 LOC102724159A0A0B4J2E5 919 aa12.82□□□□□ -0.36
GGA2-201ENST00000309859 SERPINC1P01008 464 aa12.82□□□□□ -0.36
GGA2-201ENST00000309859 BRPF1P55201 1214 aaPredicted RBP12.82□□□□□ -0.36
GGA2-201ENST00000309859 DHX8Q14562 1220 aaKnown RBP12.82□□□□□ -0.36
GGA2-201ENST00000309859 PWP2Q15269 919 aaKnown RBP12.82□□□□□ -0.36
GGA2-201ENST00000309859 CABP2Q9NPB3 220 aa12.82□□□□□ -0.36
GGA2-201ENST00000309859 HNRNPH2P55795 449 aaKnown RBP12.82□□□□□ -0.36
GGA2-201ENST00000309859 SLU7O95391 586 aaKnown RBP12.82□□□□□ -0.36
GGA2-201ENST00000309859 PRKAR2BP31323 418 aa12.82□□□□□ -0.36
GGA2-201ENST00000309859 VPS18Q9P253 973 aa12.82□□□□□ -0.36
GGA2-201ENST00000309859 HDAC1Q13547 482 aaPredicted RBP12.82□□□□□ -0.36
GGA2-201ENST00000309859 DNAAF4Q8WXU2 420 aa12.82□□□□□ -0.36
GGA2-201ENST00000309859 JAKMIP1Q96N16 626 aaKnown RBP12.82□□□□□ -0.36
GGA2-201ENST00000309859 NRBP1Q9UHY1 535 aa12.81□□□□□ -0.36
GGA2-201ENST00000309859 BIN1O00499 593 aa12.81□□□□□ -0.36
GGA2-201ENST00000309859 TMC6Q7Z403 805 aa12.81□□□□□ -0.36
GGA2-201ENST00000309859 TICAM2Q86XR7 235 aa12.81□□□□□ -0.36
GGA2-201ENST00000309859 NUTM1Q86Y26 1132 aa12.81□□□□□ -0.36
GGA2-201ENST00000309859 UBE2HP62256 183 aa12.81□□□□□ -0.36
GGA2-201ENST00000309859 CT47A1Q5JQC4 288 aaPredicted RBP12.81□□□□□ -0.36
GGA2-201ENST00000309859 STX6O43752 255 aa12.81□□□□□ -0.36
GGA2-201ENST00000309859 HSP90AA4PQ58FG1 418 aa12.81□□□□□ -0.36
GGA2-201ENST00000309859 BANK1Q8NDB2 785 aa12.81□□□□□ -0.36
GGA2-201ENST00000309859 NECAB1Q8N987 351 aa12.8□□□□□ -0.36
GGA2-201ENST00000309859 SECISBP2LQ93073 1101 aaKnown RBP12.8□□□□□ -0.36
GGA2-201ENST00000309859 RAD54L2Q9Y4B4 1467 aa12.8□□□□□ -0.36
GGA2-201ENST00000309859 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.8□□□□□ -0.36
GGA2-201ENST00000309859 ME1P48163 572 aa12.8□□□□□ -0.36
GGA2-201ENST00000309859 FAM173BQ6P4H8 233 aa12.8□□□□□ -0.36
GGA2-201ENST00000309859 ERCC6LQ2NKX8 1250 aa12.8□□□□□ -0.36
GGA2-201ENST00000309859 TTC22Q5TAA0 569 aa12.8□□□□□ -0.36
GGA2-201ENST00000309859 SFPQP23246 707 aaKnown RBP eCLIP12.79□□□□□ -0.364e-6■□□□□ 11
GGA2-201ENST00000309859 GJB2P29033 226 aa12.79□□□□□ -0.36
GGA2-201ENST00000309859 FKBP5Q13451 457 aaPredicted RBP12.79□□□□□ -0.36
GGA2-201ENST00000309859 SART3Q15020 963 aaKnown RBP12.79□□□□□ -0.36
GGA2-201ENST00000309859 TMPOP42166 694 aaKnown RBP12.79□□□□□ -0.36
GGA2-201ENST00000309859 NAT10Q9H0A0 1025 aaKnown RBP12.79□□□□□ -0.36
GGA2-201ENST00000309859 DAPK1P53355 1430 aa12.79□□□□□ -0.36
GGA2-201ENST00000309859 PPARDQ03181 441 aa12.79□□□□□ -0.36
GGA2-201ENST00000309859 DACT1Q9NYF0 836 aa12.79□□□□□ -0.36
GGA2-201ENST00000309859 CPA1P15085 419 aa12.78□□□□□ -0.36
GGA2-201ENST00000309859 TDO2P48775 406 aa12.78□□□□□ -0.36
GGA2-201ENST00000309859 GYS2P54840 703 aa12.78□□□□□ -0.36
GGA2-201ENST00000309859 NCBP1Q09161 790 aaKnown RBP12.78□□□□□ -0.36
GGA2-201ENST00000309859 DCTN1Q14203 1278 aa12.78□□□□□ -0.36
GGA2-201ENST00000309859 HDGFL2Q7Z4V5 671 aaPredicted RBP12.78□□□□□ -0.36
GGA2-201ENST00000309859 ZMYM4Q5VZL5 1548 aa12.78□□□□□ -0.36
GGA2-201ENST00000309859 TCEANC2Q96MN5 208 aa12.78□□□□□ -0.36
GGA2-201ENST00000309859 PLEKHA4Q9H4M7 779 aa12.78□□□□□ -0.36
GGA2-201ENST00000309859 NUTM2FA1L443 756 aa12.78□□□□□ -0.36
GGA2-201ENST00000309859 TYRO3Q06418 890 aa12.78□□□□□ -0.36
GGA2-201ENST00000309859 TERF2Q15554 542 aa12.78□□□□□ -0.36
GGA2-201ENST00000309859 SPG7Q9UQ90 795 aa12.78□□□□□ -0.36
GGA2-201ENST00000309859 ATAD2Q6PL18 1390 aa12.78□□□□□ -0.36
GGA2-201ENST00000309859 SPAG9O60271 1321 aaKnown RBP12.78□□□□□ -0.36
GGA2-201ENST00000309859 USP26Q9BXU7 913 aa12.78□□□□□ -0.36
GGA2-201ENST00000309859 SRCIN1Q9C0H9 1055 aa12.78□□□□□ -0.36
GGA2-201ENST00000309859 ZSCAN26Q16670 478 aa12.78□□□□□ -0.36
GGA2-201ENST00000309859 SIL1Q9H173 461 aa12.78□□□□□ -0.36
GGA2-201ENST00000309859 PDRG1Q9NUG6 133 aa12.78□□□□□ -0.36
GGA2-201ENST00000309859 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.78□□□□□ -0.36
GGA2-201ENST00000309859 CT47B1P0C2W7 299 aaPredicted RBP12.77□□□□□ -0.36
GGA2-201ENST00000309859 GUCY1B3Q02153 619 aa12.77□□□□□ -0.36
GGA2-201ENST00000309859 FAM200AQ8TCP9 573 aa12.77□□□□□ -0.36
GGA2-201ENST00000309859 RUFY1Q96T51 708 aa12.77□□□□□ -0.36
GGA2-201ENST00000309859 ACBD3Q9H3P7 528 aa12.77□□□□□ -0.36
GGA2-201ENST00000309859 CCDC69A6NI79 296 aa12.77□□□□□ -0.36
GGA2-201ENST00000309859 RNF20Q5VTR2 975 aa12.77□□□□□ -0.36
GGA2-201ENST00000309859 MINK1Q8N4C8 1332 aaPredicted RBP12.77□□□□□ -0.37
GGA2-201ENST00000309859 ATAD2BQ9ULI0 1458 aa12.77□□□□□ -0.37
GGA2-201ENST00000309859 ZSCAN22P10073 491 aaPredicted RBP12.77□□□□□ -0.37
GGA2-201ENST00000309859 SURF6O75683 361 aaKnown RBP12.76□□□□□ -0.37
GGA2-201ENST00000309859 SEC31AO94979 1220 aaKnown RBP12.76□□□□□ -0.37
GGA2-201ENST00000309859 AKAP17AQ02040 695 aaKnown RBP12.76□□□□□ -0.37
GGA2-201ENST00000309859 CAGE1Q8TC20 777 aa12.76□□□□□ -0.37
GGA2-201ENST00000309859 OAS2P29728 719 aaKnown RBP12.76□□□□□ -0.37
GGA2-201ENST00000309859 USP16Q9Y5T5 823 aa12.76□□□□□ -0.37
GGA2-201ENST00000309859 TOP2BQ02880 1626 aa12.76□□□□□ -0.37
GGA2-201ENST00000309859 EIF2S2P20042 333 aaKnown RBP12.76□□□□□ -0.37
GGA2-201ENST00000309859 EIF3JO75822 258 aaKnown RBP12.76□□□□□ -0.37
GGA2-201ENST00000309859 KIAA0754O94854 1291 aa12.76□□□□□ -0.37
GGA2-201ENST00000309859 CASQ1P31415 396 aa12.76□□□□□ -0.37
GGA2-201ENST00000309859 CFAP100Q494V2 611 aa12.76□□□□□ -0.37
GGA2-201ENST00000309859 RSPH4AQ5TD94 716 aa12.76□□□□□ -0.37
GGA2-201ENST00000309859 FGD5Q6ZNL6 1462 aa12.76□□□□□ -0.37
GGA2-201ENST00000309859 TERF2IPQ9NYB0 399 aa12.75□□□□□ -0.37
GGA2-201ENST00000309859 A0A1B0GUL7 405 aa12.75□□□□□ -0.37
GGA2-201ENST00000309859 PRPF40BQ6NWY9 871 aaKnown RBP12.75□□□□□ -0.37
GGA2-201ENST00000309859 CYP46A1Q9Y6A2 500 aa12.75□□□□□ -0.37
GGA2-201ENST00000309859 MEX3CQ5U5Q3 659 aaKnown RBP12.75□□□□□ -0.37
GGA2-201ENST00000309859 GGT6Q6P531 493 aa12.75□□□□□ -0.37
GGA2-201ENST00000309859 GPATCH3Q96I76 525 aa12.75□□□□□ -0.37
GGA2-201ENST00000309859 GNAI1P63096 354 aa12.75□□□□□ -0.37
GGA2-201ENST00000309859 ZNF692Q9BU19 519 aaPredicted RBP12.75□□□□□ -0.37
GGA2-201ENST00000309859 MIS18AQ9NYP9 233 aa12.75□□□□□ -0.37
GGA2-201ENST00000309859 CEP57L1Q8IYX8 460 aa12.74□□□□□ -0.37
GGA2-201ENST00000309859 F6X3S4 739 aa12.74□□□□□ -0.37
GGA2-201ENST00000309859 GNG11P61952 73 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms