RNA–Protein interactions for RNA: ENST00000308249.3

PPM1E-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1E, Length 6,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1E-201ENST00000308249 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.49■□□□□ 0.55
PPM1E-201ENST00000308249 CABP2Q9NPB3 220 aa18.49■□□□□ 0.55
PPM1E-201ENST00000308249 GCOM1H8Y6P7 765 aaPredicted RBP18.49■□□□□ 0.55
PPM1E-201ENST00000308249 MYZAPP0CAP1 466 aa18.49■□□□□ 0.55
PPM1E-201ENST00000308249 NUP62CLQ9H1M0 184 aa18.49■□□□□ 0.55
PPM1E-201ENST00000308249 DDX11Q96FC9 970 aa18.49■□□□□ 0.55
PPM1E-201ENST00000308249 DRC1Q96MC2 740 aa18.49■□□□□ 0.55
PPM1E-201ENST00000308249 CCDC85AQ96PX6 553 aaPredicted RBP18.49■□□□□ 0.55
PPM1E-201ENST00000308249 WDR33Q9C0J8 1336 aaKnown RBP18.49■□□□□ 0.55
PPM1E-201ENST00000308249 FERP16591 822 aa18.49■□□□□ 0.55
PPM1E-201ENST00000308249 BMS1Q14692 1282 aaKnown RBP18.49■□□□□ 0.55
PPM1E-201ENST00000308249 TNIP1Q15025 636 aa18.49■□□□□ 0.55
PPM1E-201ENST00000308249 SPECC1Q5M775 1068 aa18.49■□□□□ 0.55
PPM1E-201ENST00000308249 IL27Q8NEV9 243 aa18.49■□□□□ 0.55
PPM1E-201ENST00000308249 PDZRN3Q9UPQ7 1066 aa18.49■□□□□ 0.55
PPM1E-201ENST00000308249 SMTNL1A8MU46 457 aa18.48■□□□□ 0.55
PPM1E-201ENST00000308249 CA8P35219 290 aa18.48■□□□□ 0.55
PPM1E-201ENST00000308249 ABTB2Q8N961 1025 aa18.48■□□□□ 0.55
PPM1E-201ENST00000308249 POLR3GO15318 223 aaPredicted RBP18.48■□□□□ 0.55
PPM1E-201ENST00000308249 CDKL5O76039 1030 aa18.48■□□□□ 0.55
PPM1E-201ENST00000308249 CASQ1P31415 396 aa18.48■□□□□ 0.55
PPM1E-201ENST00000308249 ANKRD18BA2A2Z9 1011 aa18.48■□□□□ 0.55
PPM1E-201ENST00000308249 PDCL2Q8N4E4 241 aa18.48■□□□□ 0.55
PPM1E-201ENST00000308249 FERMT2Q96AC1 680 aa18.47■□□□□ 0.55
PPM1E-201ENST00000308249 LRP2BPQ9P2M1 347 aa18.47■□□□□ 0.55
PPM1E-201ENST00000308249 CABP4P57796 275 aa18.47■□□□□ 0.55
PPM1E-201ENST00000308249 IMMTQ16891 758 aaKnown RBP18.47■□□□□ 0.55
PPM1E-201ENST00000308249 PDRG1Q9NUG6 133 aa18.47■□□□□ 0.55
PPM1E-201ENST00000308249 ARL1P40616 181 aaPredicted RBP18.47■□□□□ 0.55
PPM1E-201ENST00000308249 CBX1P83916 185 aa18.47■□□□□ 0.55
PPM1E-201ENST00000308249 PLEKHO1Q53GL0 409 aaPredicted RBP18.47■□□□□ 0.55
PPM1E-201ENST00000308249 APBB1IPQ7Z5R6 666 aaPredicted RBP18.46■□□□□ 0.55
PPM1E-201ENST00000308249 USP47Q96K76 1375 aa18.46■□□□□ 0.55
PPM1E-201ENST00000308249 ZSCAN25Q6NSZ9 544 aa18.46■□□□□ 0.55
PPM1E-201ENST00000308249 JAKMIP1Q96N16 626 aaKnown RBP18.46■□□□□ 0.55
PPM1E-201ENST00000308249 CCDC175P0C221 793 aa18.46■□□□□ 0.55
PPM1E-201ENST00000308249 ESCO1Q5FWF5 840 aa18.46■□□□□ 0.55
PPM1E-201ENST00000308249 BLOC1S2Q6QNY1 142 aa18.46■□□□□ 0.55
PPM1E-201ENST00000308249 MRPS9P82933 396 aaKnown RBP18.45■□□□□ 0.54
PPM1E-201ENST00000308249 CCDC96Q2M329 555 aa18.45■□□□□ 0.54
PPM1E-201ENST00000308249 KIF4BQ2VIQ3 1234 aa18.45■□□□□ 0.54
PPM1E-201ENST00000308249 FKBP15Q5T1M5 1219 aa18.45■□□□□ 0.54
PPM1E-201ENST00000308249 AACSQ86V21 672 aa18.45■□□□□ 0.54
PPM1E-201ENST00000308249 GRPEL1Q9HAV7 217 aa18.45■□□□□ 0.54
PPM1E-201ENST00000308249 CWC27Q6UX04 472 aaKnown RBP18.45■□□□□ 0.54
PPM1E-201ENST00000308249 CCDC150Q8NCX0 1101 aa18.45■□□□□ 0.54
PPM1E-201ENST00000308249 TSG101Q99816 390 aa18.45■□□□□ 0.54
PPM1E-201ENST00000308249 GBP3Q9H0R5 595 aa18.45■□□□□ 0.54
PPM1E-201ENST00000308249 SPTY2D1Q68D10 685 aaPredicted RBP18.44■□□□□ 0.54
PPM1E-201ENST00000308249 URI1O94763 535 aaPredicted RBP18.44■□□□□ 0.54
PPM1E-201ENST00000308249 ZWINTO95229 277 aa18.44■□□□□ 0.54
PPM1E-201ENST00000308249 SLC4A2P04920 1241 aa18.44■□□□□ 0.54
PPM1E-201ENST00000308249 TTLL12Q14166 644 aaPredicted RBP18.44■□□□□ 0.54
PPM1E-201ENST00000308249 ZFP91Q96JP5 570 aaPredicted RBP18.44■□□□□ 0.54
PPM1E-201ENST00000308249 CFAP57Q96MR6 1250 aa18.44■□□□□ 0.54
PPM1E-201ENST00000308249 IDH1O75874 414 aaKnown RBP18.44■□□□□ 0.54
PPM1E-201ENST00000308249 SSX2IPQ9Y2D8 614 aa18.44■□□□□ 0.54
PPM1E-201ENST00000308249 HLTFQ14527 1009 aaKnown RBP eCLIP18.44■□□□□ 0.54
PPM1E-201ENST00000308249 CPLX3Q8WVH0 158 aa18.44■□□□□ 0.54
PPM1E-201ENST00000308249 TMOD2Q9NZR1 351 aa18.44■□□□□ 0.54
PPM1E-201ENST00000308249 SEC63Q9UGP8 760 aaKnown RBP18.44■□□□□ 0.54
PPM1E-201ENST00000308249 PRPF4BQ13523 1007 aaKnown RBP18.43■□□□□ 0.54
PPM1E-201ENST00000308249 TDRD12Q587J7 1177 aaKnown RBP18.43■□□□□ 0.54
PPM1E-201ENST00000308249 ABCF2Q9UG63 623 aa18.43■□□□□ 0.54
PPM1E-201ENST00000308249 KIF5CO60282 957 aa18.43■□□□□ 0.54
PPM1E-201ENST00000308249 NOB1Q9ULX3 412 aaKnown RBP18.43■□□□□ 0.54
PPM1E-201ENST00000308249 ATP2C2O75185 946 aa18.42■□□□□ 0.54
PPM1E-201ENST00000308249 TWISTNBQ3B726 338 aaPredicted RBP18.42■□□□□ 0.54
PPM1E-201ENST00000308249 MAP9Q49MG5 647 aa18.42■□□□□ 0.54
PPM1E-201ENST00000308249 VPS36Q86VN1 386 aa18.42■□□□□ 0.54
PPM1E-201ENST00000308249 HDGFL1Q5TGJ6 251 aa18.42■□□□□ 0.54
PPM1E-201ENST00000308249 CRACR2BQ8N4Y2 399 aaPredicted RBP18.42■□□□□ 0.54
PPM1E-201ENST00000308249 GAS2L2Q8NHY3 880 aa18.42■□□□□ 0.54
PPM1E-201ENST00000308249 SRRTQ9BXP5 876 aaKnown RBP18.42■□□□□ 0.54
PPM1E-201ENST00000308249 LMAN1P49257 510 aa18.42■□□□□ 0.54
PPM1E-201ENST00000308249 EXOSC9Q06265 439 aaKnown RBP18.42■□□□□ 0.54
PPM1E-201ENST00000308249 PPP1R14CQ8TAE6 165 aa18.42■□□□□ 0.54
PPM1E-201ENST00000308249 TSNARE1Q96NA8 513 aa18.42■□□□□ 0.54
PPM1E-201ENST00000308249 TATP17735 454 aaPredicted RBP18.42■□□□□ 0.54
PPM1E-201ENST00000308249 FEZ1Q99689 392 aa18.41■□□□□ 0.54
PPM1E-201ENST00000308249 PUF60Q9UHX1 559 aaKnown RBP18.41■□□□□ 0.54
PPM1E-201ENST00000308249 ZNF354CQ86Y25 554 aa18.41■□□□□ 0.54
PPM1E-201ENST00000308249 TIGD1Q96MW7 591 aa18.41■□□□□ 0.54
PPM1E-201ENST00000308249 CEP131Q9UPN4 1083 aa18.41■□□□□ 0.54
PPM1E-201ENST00000308249 K7ELQ4 463 aaPredicted RBP18.41■□□□□ 0.54
PPM1E-201ENST00000308249 FAM107BQ9H098 131 aa18.4■□□□□ 0.54
PPM1E-201ENST00000308249 POLR3DP05423 398 aaPredicted RBP18.4■□□□□ 0.54
PPM1E-201ENST00000308249 PTPN14Q15678 1187 aa18.4■□□□□ 0.54
PPM1E-201ENST00000308249 TOM1L2Q6ZVM7 507 aa18.4■□□□□ 0.54
PPM1E-201ENST00000308249 FSD2A1L4K1 749 aa18.4■□□□□ 0.54
PPM1E-201ENST00000308249 WASF1Q92558 559 aa18.4■□□□□ 0.54
PPM1E-201ENST00000308249 CCDC160A6NGH7 325 aa18.4■□□□□ 0.54
PPM1E-201ENST00000308249 RAB3IL1Q8TBN0 382 aa18.4■□□□□ 0.54
PPM1E-201ENST00000308249 MINDY4BA8MYZ0 360 aa18.4■□□□□ 0.54
PPM1E-201ENST00000308249 NUP88Q99567 741 aaPredicted RBP18.4■□□□□ 0.54
PPM1E-201ENST00000308249 MICALCLQ6ZW33 695 aa18.39■□□□□ 0.53
PPM1E-201ENST00000308249 PRKAR2BP31323 418 aa18.39■□□□□ 0.53
PPM1E-201ENST00000308249 PAFAH1B1P43034 410 aa18.39■□□□□ 0.53
PPM1E-201ENST00000308249 AIDAQ96BJ3 306 aa18.39■□□□□ 0.53
PPM1E-201ENST00000308249 C6orf163Q5TEZ5 329 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms