RNA–Protein interactions for RNA: ENST00000307808.10

AFF1-201, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AFF1, Length 9,390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-201ENST00000307808 ALS2CR12Q96Q35 445 aa15.34■□□□□ 0.05
AFF1-201ENST00000307808 NEMFO60524 1076 aa15.34■□□□□ 0.05
AFF1-201ENST00000307808 PHAXQ9H814 394 aaKnown RBP15.34■□□□□ 0.05
AFF1-201ENST00000307808 APAF1O14727 1248 aa15.33■□□□□ 0.05
AFF1-201ENST00000307808 DAAM2Q86T65 1068 aa15.33■□□□□ 0.05
AFF1-201ENST00000307808 EHBP1Q8NDI1 1231 aa15.33■□□□□ 0.04
AFF1-201ENST00000307808 RAB34Q9BZG1 259 aa15.33■□□□□ 0.04
AFF1-201ENST00000307808 ZHX3Q9H4I2 956 aa15.33■□□□□ 0.04
AFF1-201ENST00000307808 SMARCA4P51532 1647 aa15.33■□□□□ 0.04
AFF1-201ENST00000307808 SSR1P43307 286 aaKnown RBP15.33■□□□□ 0.04
AFF1-201ENST00000307808 RBM10P98175 930 aaKnown RBP15.33■□□□□ 0.04
AFF1-201ENST00000307808 LARP1BQ659C4 914 aaKnown RBP15.33■□□□□ 0.04
AFF1-201ENST00000307808 NECTIN2Q92692 538 aa15.33■□□□□ 0.04
AFF1-201ENST00000307808 CEBPZQ03701 1054 aaKnown RBP15.32■□□□□ 0.04
AFF1-201ENST00000307808 TSG101Q99816 390 aa15.32■□□□□ 0.04
AFF1-201ENST00000307808 DHX57Q6P158 1386 aaKnown RBP15.32■□□□□ 0.04
AFF1-201ENST00000307808 SEPT6Q14141 434 aa15.32■□□□□ 0.04
AFF1-201ENST00000307808 GAS2L2Q8NHY3 880 aa15.32■□□□□ 0.04
AFF1-201ENST00000307808 PPP6R1Q9UPN7 881 aa15.32■□□□□ 0.04
AFF1-201ENST00000307808 ESPNB1AK53 854 aa15.32■□□□□ 0.04
AFF1-201ENST00000307808 CAVIN2O95810 425 aa15.32■□□□□ 0.04
AFF1-201ENST00000307808 CCDC113Q9H0I3 377 aa15.32■□□□□ 0.04
AFF1-201ENST00000307808 SEC63Q9UGP8 760 aaKnown RBP15.32■□□□□ 0.04
AFF1-201ENST00000307808 CFAP100Q494V2 611 aa15.32■□□□□ 0.04
AFF1-201ENST00000307808 HECW1Q76N89 1606 aa15.32■□□□□ 0.04
AFF1-201ENST00000307808 MYOM3Q5VTT5 1437 aa15.32■□□□□ 0.04
AFF1-201ENST00000307808 FSD2A1L4K1 749 aa15.31■□□□□ 0.04
AFF1-201ENST00000307808 ZSCAN30Q86W11 494 aa15.31■□□□□ 0.04
AFF1-201ENST00000307808 USO1O60763 962 aaKnown RBP15.31■□□□□ 0.04
AFF1-201ENST00000307808 ZSCAN31Q96LW9 406 aaPredicted RBP15.31■□□□□ 0.04
AFF1-201ENST00000307808 CTAGE5O15320 804 aa15.31■□□□□ 0.04
AFF1-201ENST00000307808 CETN1Q12798 172 aa15.31■□□□□ 0.04
AFF1-201ENST00000307808 DDX46Q7L014 1031 aaKnown RBP15.31■□□□□ 0.04
AFF1-201ENST00000307808 HOMEZQ8IX15 550 aa15.3■□□□□ 0.04
AFF1-201ENST00000307808 IKBKGQ9Y6K9 419 aa15.3■□□□□ 0.04
AFF1-201ENST00000307808 GSDMDP57764 484 aa15.3■□□□□ 0.04
AFF1-201ENST00000307808 TSNARE1Q96NA8 513 aa15.3■□□□□ 0.04
AFF1-201ENST00000307808 IVLP07476 585 aa15.3■□□□□ 0.04
AFF1-201ENST00000307808 PLVAPQ9BX97 442 aa15.3■□□□□ 0.04
AFF1-201ENST00000307808 PDE3AQ14432 1141 aa15.3■□□□□ 0.04
AFF1-201ENST00000307808 HOMER2Q9NSB8 354 aa15.3■□□□□ 0.04
AFF1-201ENST00000307808 GOPCQ9HD26 462 aa15.3■□□□□ 0.04
AFF1-201ENST00000307808 PAFAH1B1P43034 410 aa15.29■□□□□ 0.04
AFF1-201ENST00000307808 CTR9Q6PD62 1173 aa15.29■□□□□ 0.04
AFF1-201ENST00000307808 BCCIPQ9P287 314 aaKnown RBP eCLIP15.29■□□□□ 0.04
AFF1-201ENST00000307808 TICAM2Q86XR7 235 aa15.29■□□□□ 0.04
AFF1-201ENST00000307808 UBAC1Q9BSL1 405 aa15.29■□□□□ 0.04
AFF1-201ENST00000307808 ATP2B1P20020 1258 aa15.29■□□□□ 0.04
AFF1-201ENST00000307808 TUBB4BP68371 445 aa15.29■□□□□ 0.04
AFF1-201ENST00000307808 LRRC45Q96CN5 670 aa15.29■□□□□ 0.04
AFF1-201ENST00000307808 PABPN1LA6NDY0 278 aaKnown RBP15.29■□□□□ 0.04
AFF1-201ENST00000307808 KIF20AO95235 890 aa15.29■□□□□ 0.04
AFF1-201ENST00000307808 CCDC196A0A1B0GTZ2 297 aa15.28■□□□□ 0.04
AFF1-201ENST00000307808 BMS1Q14692 1282 aaKnown RBP15.28■□□□□ 0.04
AFF1-201ENST00000307808 DNAJC2Q99543 621 aaKnown RBP15.28■□□□□ 0.04
AFF1-201ENST00000307808 PYM1Q9BRP8 204 aaKnown RBP15.28■□□□□ 0.04
AFF1-201ENST00000307808 CNNM1Q9NRU3 951 aa15.28■□□□□ 0.04
AFF1-201ENST00000307808 NSRP1Q9H0G5 558 aaKnown RBP15.28■□□□□ 0.04
AFF1-201ENST00000307808 STMN4Q9H169 189 aaPredicted RBP15.28■□□□□ 0.04
AFF1-201ENST00000307808 CEP112Q8N8E3 955 aa15.28■□□□□ 0.04
AFF1-201ENST00000307808 MPHOSPH10O00566 681 aaKnown RBP15.28■□□□□ 0.04
AFF1-201ENST00000307808 SURF6O75683 361 aaKnown RBP15.28■□□□□ 0.04
AFF1-201ENST00000307808 FAM114A1Q8IWE2 563 aa15.28■□□□□ 0.04
AFF1-201ENST00000307808 NUTM2FA1L443 756 aa15.27■□□□□ 0.04
AFF1-201ENST00000307808 IL27Q8NEV9 243 aa15.27■□□□□ 0.04
AFF1-201ENST00000307808 ATP2B2Q01814 1243 aa15.27■□□□□ 0.04
AFF1-201ENST00000307808 GPRASP1Q5JY77 1395 aa15.27■□□□□ 0.04
AFF1-201ENST00000307808 MCM5P33992 734 aa15.27■□□□□ 0.04
AFF1-201ENST00000307808 HNRNPMP52272 730 aaKnown RBP eCLIP15.27■□□□□ 0.042e-7■□□□□ 8.5
AFF1-201ENST00000307808 CACNA2D4Q7Z3S7 1137 aa15.27■□□□□ 0.04
AFF1-201ENST00000307808 IFI16Q16666 785 aaKnown RBP15.27■□□□□ 0.03
AFF1-201ENST00000307808 CCDC183Q5T5S1 534 aa15.27■□□□□ 0.03
AFF1-201ENST00000307808 HSPA4P34932 840 aa15.27■□□□□ 0.03
AFF1-201ENST00000307808 ZNF76P36508 570 aa15.27■□□□□ 0.03
AFF1-201ENST00000307808 UBE4AQ14139 1066 aa15.27■□□□□ 0.03
AFF1-201ENST00000307808 CCDC178Q5BJE1 867 aa15.27■□□□□ 0.03
AFF1-201ENST00000307808 ERICH3Q5RHP9 1530 aa15.27■□□□□ 0.03
AFF1-201ENST00000307808 ARHGAP5Q13017 1502 aa15.26■□□□□ 0.03
AFF1-201ENST00000307808 ATF3P18847 181 aa15.26■□□□□ 0.03
AFF1-201ENST00000307808 LARP1Q6PKG0 1096 aaKnown RBP15.26■□□□□ 0.03
AFF1-201ENST00000307808 BLOC1S2Q6QNY1 142 aa15.26■□□□□ 0.03
AFF1-201ENST00000307808 CTNNA2P26232 953 aa15.26■□□□□ 0.03
AFF1-201ENST00000307808 MTMR7Q9Y216 660 aa15.26■□□□□ 0.03
AFF1-201ENST00000307808 U3KPZ7 1027 aaPredicted RBP15.26■□□□□ 0.03
AFF1-201ENST00000307808 SCAND2PQ9GZW5 306 aaPredicted RBP15.26■□□□□ 0.03
AFF1-201ENST00000307808 ANO10Q9NW15 660 aa15.26■□□□□ 0.03
AFF1-201ENST00000307808 FHOD3Q2V2M9 1422 aa15.26■□□□□ 0.03
AFF1-201ENST00000307808 PANK1Q8TE04 598 aa15.25■□□□□ 0.03
AFF1-201ENST00000307808 SSX2IPQ9Y2D8 614 aa15.25■□□□□ 0.03
AFF1-201ENST00000307808 SPECC1Q5M775 1068 aa15.25■□□□□ 0.03
AFF1-201ENST00000307808 MINK1Q8N4C8 1332 aaPredicted RBP15.25■□□□□ 0.03
AFF1-201ENST00000307808 AIMP1Q12904 312 aaKnown RBP15.25■□□□□ 0.03
AFF1-201ENST00000307808 TTC12Q9H892 705 aaPredicted RBP15.25■□□□□ 0.03
AFF1-201ENST00000307808 CCDC172P0C7W6 258 aa15.24■□□□□ 0.03
AFF1-201ENST00000307808 PAXBP1Q9Y5B6 917 aa15.24■□□□□ 0.03
AFF1-201ENST00000307808 RNF187Q5TA31 235 aaPredicted RBP15.24■□□□□ 0.03
AFF1-201ENST00000307808 WDR66Q8TBY9 1149 aa15.24■□□□□ 0.03
AFF1-201ENST00000307808 TTC21AQ8NDW8 1320 aa15.24■□□□□ 0.03
AFF1-201ENST00000307808 TIGD1Q96MW7 591 aa15.24■□□□□ 0.03
AFF1-201ENST00000307808 COMMD10Q9Y6G5 202 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms