RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 BARGINQ6ZT62 677 aa35.99■■■■□ 3.35
HDAC3-201ENST00000305264 RUNDC1Q96C34 613 aa35.98■■■■□ 3.35
HDAC3-201ENST00000305264 PNNQ9H307 717 aaKnown RBP35.98■■■■□ 3.35
HDAC3-201ENST00000305264 THSD7AQ9UPZ6 1657 aa35.97■■■■□ 3.35
HDAC3-201ENST00000305264 LRRC37A3O60309 1634 aa35.96■■■■□ 3.35
HDAC3-201ENST00000305264 MAPK8IP3Q9UPT6 1336 aa35.96■■■■□ 3.35
HDAC3-201ENST00000305264 SHANK3Q9BYB0 1731 aa35.96■■■■□ 3.35
HDAC3-201ENST00000305264 SENP3-EIF4A1A0A087X0R7 540 aa35.94■■■■□ 3.34
HDAC3-201ENST00000305264 PLEKHG2Q9H7P9 1386 aa35.94■■■■□ 3.34
HDAC3-201ENST00000305264 NEFMP07197 916 aa35.92■■■■□ 3.34
HDAC3-201ENST00000305264 POTEAQ6S8J7 498 aa35.92■■■■□ 3.34
HDAC3-201ENST00000305264 CDCA7Q9BWT1 371 aaPredicted RBP35.91■■■■□ 3.34
HDAC3-201ENST00000305264 MTHFSDQ2M296 383 aaKnown RBP35.91■■■■□ 3.34
HDAC3-201ENST00000305264 APAF1O14727 1248 aa35.9■■■■□ 3.34
HDAC3-201ENST00000305264 DLG5Q8TDM6 1919 aa35.9■■■■□ 3.34
HDAC3-201ENST00000305264 RBM6P78332 1123 aaKnown RBP35.89■■■■□ 3.34
HDAC3-201ENST00000305264 PLEKHO1Q53GL0 409 aaPredicted RBP35.89■■■■□ 3.34
HDAC3-201ENST00000305264 TNS2Q63HR2 1409 aa35.89■■■■□ 3.34
HDAC3-201ENST00000305264 AMOTQ4VCS5 1084 aa35.87■■■■□ 3.33
HDAC3-201ENST00000305264 ZCRB1Q8TBF4 217 aaKnown RBP35.87■■■■□ 3.33
HDAC3-201ENST00000305264 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.87■■■■□ 3.33
HDAC3-201ENST00000305264 RRP7AQ9Y3A4 280 aaKnown RBP35.87■■■■□ 3.33
HDAC3-201ENST00000305264 A0A0G2JS52 829 aa35.86■■■■□ 3.33
HDAC3-201ENST00000305264 MYT1Q01538 1121 aa35.86■■■■□ 3.33
HDAC3-201ENST00000305264 SPG7Q9UQ90 795 aa35.85■■■■□ 3.33
HDAC3-201ENST00000305264 ONECUT3O60422 494 aaPredicted RBP35.85■■■■□ 3.33
HDAC3-201ENST00000305264 NFE2L2Q16236 605 aa35.84■■■■□ 3.33
HDAC3-201ENST00000305264 ZNF530Q6P9A1 599 aaPredicted RBP35.84■■■■□ 3.33
HDAC3-201ENST00000305264 TMPOP42166 694 aaKnown RBP35.84■■■■□ 3.33
HDAC3-201ENST00000305264 GAS2L2Q8NHY3 880 aa35.84■■■■□ 3.33
HDAC3-201ENST00000305264 RXRBP28702 533 aa35.83■■■■□ 3.33
HDAC3-201ENST00000305264 DDB1Q16531 1140 aa35.83■■■■□ 3.33
HDAC3-201ENST00000305264 NEUROD2Q15784 382 aa35.82■■■■□ 3.32
HDAC3-201ENST00000305264 PCDH11XQ9BZA7 1347 aa35.81■■■■□ 3.32
HDAC3-201ENST00000305264 PCDH11YQ9BZA8 1340 aa35.81■■■■□ 3.32
HDAC3-201ENST00000305264 EXOC5O00471 708 aa35.81■■■■□ 3.32
HDAC3-201ENST00000305264 CYP27B1O15528 508 aa35.81■■■■□ 3.32
HDAC3-201ENST00000305264 SEPT12Q8IYM1 358 aa35.8■■■■□ 3.32
HDAC3-201ENST00000305264 BRWD3Q6RI45 1802 aa35.79■■■■□ 3.32
HDAC3-201ENST00000305264 DDX54Q8TDD1 881 aaKnown RBP35.78■■■■□ 3.32
HDAC3-201ENST00000305264 RIPK4P57078 832 aa35.77■■■■□ 3.32
HDAC3-201ENST00000305264 MAP3K5Q99683 1374 aa35.77■■■■□ 3.32
HDAC3-201ENST00000305264 RGS12O14924 1447 aa35.77■■■■□ 3.32
HDAC3-201ENST00000305264 PHKG2P15735 406 aa35.76■■■■□ 3.32
HDAC3-201ENST00000305264 SALL2Q9Y467 1007 aaPredicted RBP35.76■■■■□ 3.32
HDAC3-201ENST00000305264 VIRMAQ69YN4 1812 aaKnown RBP35.76■■■■□ 3.32
HDAC3-201ENST00000305264 HNRNPUQ00839 825 aaKnown RBP eCLIP35.76■■■■□ 3.31
HDAC3-201ENST00000305264 C1orf141Q5JVX7 400 aa35.75■■■■□ 3.31
HDAC3-201ENST00000305264 AKAP4Q5JQC9 854 aa35.75■■■■□ 3.31
HDAC3-201ENST00000305264 IFNL2Q8IZJ0 200 aa35.75■■■■□ 3.31
HDAC3-201ENST00000305264 GNAT3A8MTJ3 354 aa35.72■■■■□ 3.31
HDAC3-201ENST00000305264 YTHDC1Q96MU7 727 aaKnown RBP35.72■■■■□ 3.31
HDAC3-201ENST00000305264 MARCH10Q8NA82 808 aaPredicted RBP35.71■■■■□ 3.31
HDAC3-201ENST00000305264 TRIM35Q9UPQ4 493 aa35.71■■■■□ 3.31
HDAC3-201ENST00000305264 ADAMTS7Q9UKP4 1686 aa35.7■■■■□ 3.31
HDAC3-201ENST00000305264 KDM6AO15550 1401 aaPredicted RBP35.7■■■■□ 3.3
HDAC3-201ENST00000305264 SCN11AQ9UI33 1791 aa35.69■■■■□ 3.3
HDAC3-201ENST00000305264 PDE3BQ13370 1112 aa35.69■■■■□ 3.3
HDAC3-201ENST00000305264 TOGARAM1Q9Y4F4 1720 aa35.68■■■■□ 3.3
HDAC3-201ENST00000305264 DCTN1Q14203 1278 aa35.68■■■■□ 3.3
HDAC3-201ENST00000305264 MPRIPQ6WCQ1 1025 aa35.68■■■■□ 3.3
HDAC3-201ENST00000305264 MCM10Q7L590 875 aa35.67■■■■□ 3.3
HDAC3-201ENST00000305264 THUMPD2Q9BTF0 503 aaKnown RBP35.65■■■■□ 3.3
HDAC3-201ENST00000305264 LMOD3Q0VAK6 560 aa35.65■■■■□ 3.3
HDAC3-201ENST00000305264 NKX1-1Q15270 411 aaPredicted RBP35.65■■■■□ 3.3
HDAC3-201ENST00000305264 RTF1Q92541 710 aaKnown RBP35.65■■■■□ 3.3
HDAC3-201ENST00000305264 CCDC27Q2M243 656 aa35.64■■■■□ 3.3
HDAC3-201ENST00000305264 LGR6Q9HBX8 967 aa35.64■■■■□ 3.3
HDAC3-201ENST00000305264 NCBP3Q53F19 620 aaKnown RBP35.64■■■■□ 3.3
HDAC3-201ENST00000305264 IL17REQ8NFR9 667 aa35.64■■■■□ 3.3
HDAC3-201ENST00000305264 DOT1LQ8TEK3 1739 aa35.63■■■■□ 3.3
HDAC3-201ENST00000305264 HTATSF1O43719 755 aaKnown RBP35.63■■■■□ 3.29
HDAC3-201ENST00000305264 FAM182BQ5T319 152 aa35.63■■■■□ 3.29
HDAC3-201ENST00000305264 WWC1Q8IX03 1113 aa35.63■■■■□ 3.29
HDAC3-201ENST00000305264 NGEFQ8N5V2 710 aa35.63■■■■□ 3.29
HDAC3-201ENST00000305264 HSP90AB1P08238 724 aaKnown RBP35.62■■■■□ 3.29
HDAC3-201ENST00000305264 DCAF5Q96JK2 942 aa35.62■■■■□ 3.29
HDAC3-201ENST00000305264 EP400Q96L91 3159 aa35.62■■■■□ 3.29
HDAC3-201ENST00000305264 CEMIPQ8WUJ3 1361 aa35.62■■■■□ 3.29
HDAC3-201ENST00000305264 RNMTO43148 476 aaKnown RBP35.61■■■■□ 3.29
HDAC3-201ENST00000305264 KRT27Q7Z3Y8 459 aa35.61■■■■□ 3.29
HDAC3-201ENST00000305264 ZNF521Q96K83 1311 aa35.6■■■■□ 3.29
HDAC3-201ENST00000305264 MRC1P22897 1456 aa35.57■■■■□ 3.28
HDAC3-201ENST00000305264 SIPA1L3O60292 1781 aaPredicted RBP35.57■■■■□ 3.28
HDAC3-201ENST00000305264 KAT6BQ8WYB5 2073 aa35.57■■■■□ 3.28
HDAC3-201ENST00000305264 ZBED9Q6R2W3 1325 aa35.56■■■■□ 3.28
HDAC3-201ENST00000305264 ITGB4P16144 1822 aa35.56■■■■□ 3.28
HDAC3-201ENST00000305264 BCL9O00512 1426 aa35.52■■■■□ 3.28
HDAC3-201ENST00000305264 SBF2Q86WG5 1849 aa35.52■■■■□ 3.28
HDAC3-201ENST00000305264 ACSBG1Q96GR2 724 aa35.51■■■■□ 3.27
HDAC3-201ENST00000305264 ERVV-2B6SEH9 535 aa35.49■■■■□ 3.27
HDAC3-201ENST00000305264 TEFQ10587 303 aa35.49■■■■□ 3.27
HDAC3-201ENST00000305264 SLC52A2Q9HAB3 445 aa35.49■■■■□ 3.27
HDAC3-201ENST00000305264 NHSQ6T4R5 1651 aa35.48■■■■□ 3.27
HDAC3-201ENST00000305264 WDR63Q8IWG1 891 aa35.48■■■■□ 3.27
HDAC3-201ENST00000305264 CABP4P57796 275 aa35.47■■■■□ 3.27
HDAC3-201ENST00000305264 NFATC2IPQ8NCF5 419 aa35.47■■■■□ 3.27
HDAC3-201ENST00000305264 SPINK5Q9NQ38 1064 aaPredicted RBP35.46■■■■□ 3.27
HDAC3-201ENST00000305264 PRIM1P49642 420 aaKnown RBP35.45■■■■□ 3.27
HDAC3-201ENST00000305264 SYTL4Q96C24 671 aaPredicted RBP35.45■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms