RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 CNPY2Q9Y2B0 182 aa13.29□□□□□ -0.28
SNX20-201ENST00000300590 MINK1Q8N4C8 1332 aaPredicted RBP13.28□□□□□ -0.28
SNX20-201ENST00000300590 PREX2Q70Z35 1606 aa13.28□□□□□ -0.28
SNX20-201ENST00000300590 LETM1O95202 739 aaPredicted RBP13.28□□□□□ -0.28
SNX20-201ENST00000300590 KIF20AO95235 890 aa13.28□□□□□ -0.28
SNX20-201ENST00000300590 SLC4A10Q6U841 1118 aa13.28□□□□□ -0.28
SNX20-201ENST00000300590 API5Q9BZZ5 524 aaKnown RBP13.28□□□□□ -0.28
SNX20-201ENST00000300590 FKBP5Q13451 457 aaPredicted RBP13.27□□□□□ -0.28
SNX20-201ENST00000300590 NAA30Q147X3 362 aaPredicted RBP13.27□□□□□ -0.28
SNX20-201ENST00000300590 CFAP44Q96MT7 982 aa13.27□□□□□ -0.28
SNX20-201ENST00000300590 SPHKAPQ2M3C7 1700 aa13.26□□□□□ -0.29
SNX20-201ENST00000300590 GGT6Q6P531 493 aa13.26□□□□□ -0.29
SNX20-201ENST00000300590 ARHGAP45Q92619 1136 aa13.26□□□□□ -0.29
SNX20-201ENST00000300590 MEIS3Q99687 375 aa13.26□□□□□ -0.29
SNX20-201ENST00000300590 TRPM2O94759 1503 aa13.26□□□□□ -0.29
SNX20-201ENST00000300590 GNAI1P63096 354 aa13.26□□□□□ -0.29
SNX20-201ENST00000300590 C14orf93Q9H972 538 aaKnown RBP13.26□□□□□ -0.29
SNX20-201ENST00000300590 DIAPH3Q9NSV4 1193 aa13.26□□□□□ -0.29
SNX20-201ENST00000300590 EXOC6BQ9Y2D4 811 aa13.26□□□□□ -0.29
SNX20-201ENST00000300590 NCBP3Q53F19 620 aaKnown RBP13.25□□□□□ -0.29
SNX20-201ENST00000300590 ANKRD36BQ8N2N9 1353 aa13.25□□□□□ -0.29
SNX20-201ENST00000300590 ABCC4O15439 1325 aa13.25□□□□□ -0.29
SNX20-201ENST00000300590 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.25□□□□□ -0.29
SNX20-201ENST00000300590 KDM4AO75164 1064 aa13.25□□□□□ -0.29
SNX20-201ENST00000300590 PAXIP1Q6ZW49 1069 aaPredicted RBP13.25□□□□□ -0.29
SNX20-201ENST00000300590 DRC7Q8IY82 874 aa13.25□□□□□ -0.29
SNX20-201ENST00000300590 C16orf45Q96MC5 204 aaPredicted RBP13.25□□□□□ -0.29
SNX20-201ENST00000300590 FCHSD2O94868 740 aa13.24□□□□□ -0.29
SNX20-201ENST00000300590 GTF2F1P35269 517 aaKnown RBP eCLIP13.24□□□□□ -0.29
SNX20-201ENST00000300590 ANKRD44Q8N8A2 993 aa13.24□□□□□ -0.29
SNX20-201ENST00000300590 FAM184AQ8NB25 1140 aa13.24□□□□□ -0.29
SNX20-201ENST00000300590 A0A1W2PP64 1363 aa13.24□□□□□ -0.29
SNX20-201ENST00000300590 AP5Z1O43299 807 aa13.24□□□□□ -0.29
SNX20-201ENST00000300590 CCDC183Q5T5S1 534 aa13.24□□□□□ -0.29
SNX20-201ENST00000300590 CEP85Q6P2H3 762 aa13.24□□□□□ -0.29
SNX20-201ENST00000300590 ZNF592Q92610 1267 aa13.24□□□□□ -0.29
SNX20-201ENST00000300590 SRCIN1Q9C0H9 1055 aa13.24□□□□□ -0.29
SNX20-201ENST00000300590 MCCP23508 829 aa13.24□□□□□ -0.29
SNX20-201ENST00000300590 NFE2L2Q16236 605 aa13.24□□□□□ -0.29
SNX20-201ENST00000300590 ARHGAP31Q2M1Z3 1444 aa13.24□□□□□ -0.29
SNX20-201ENST00000300590 SHROOM2Q13796 1616 aa13.24□□□□□ -0.29
SNX20-201ENST00000300590 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.23□□□□□ -0.29
SNX20-201ENST00000300590 KCNF1Q9H3M0 494 aa13.23□□□□□ -0.29
SNX20-201ENST00000300590 ABCA6Q8N139 1617 aa13.23□□□□□ -0.29
SNX20-201ENST00000300590 SBNO2Q9Y2G9 1366 aa13.23□□□□□ -0.29
SNX20-201ENST00000300590 UVSSAQ2YD98 709 aa13.23□□□□□ -0.29
SNX20-201ENST00000300590 ZNF428Q96B54 188 aa13.23□□□□□ -0.29
SNX20-201ENST00000300590 KIAA1524Q8TCG1 905 aa13.23□□□□□ -0.29
SNX20-201ENST00000300590 IFT57Q9NWB7 429 aa13.23□□□□□ -0.29
SNX20-201ENST00000300590 MX1P20591 662 aa13.22□□□□□ -0.29
SNX20-201ENST00000300590 PTGS1P23219 599 aa13.22□□□□□ -0.29
SNX20-201ENST00000300590 PDE1AP54750 535 aa13.22□□□□□ -0.29
SNX20-201ENST00000300590 MAP4K4O95819 1239 aaPredicted RBP13.22□□□□□ -0.29
SNX20-201ENST00000300590 TERF2IPQ9NYB0 399 aa13.22□□□□□ -0.29
SNX20-201ENST00000300590 WDR33Q9C0J8 1336 aaKnown RBP13.22□□□□□ -0.29
SNX20-201ENST00000300590 SPTLC3Q9NUV7 552 aa13.21□□□□□ -0.29
SNX20-201ENST00000300590 F6X3S4 739 aa13.21□□□□□ -0.29
SNX20-201ENST00000300590 LRMPQ12912 555 aa13.21□□□□□ -0.29
SNX20-201ENST00000300590 CAMK4Q16566 473 aa13.21□□□□□ -0.29
SNX20-201ENST00000300590 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.21□□□□□ -0.29
SNX20-201ENST00000300590 V9GYY5 206 aaPredicted RBP13.21□□□□□ -0.29
SNX20-201ENST00000300590 CFAP65Q6ZU64 1925 aaKnown RBP13.21□□□□□ -0.29
SNX20-201ENST00000300590 MED14O60244 1454 aa13.21□□□□□ -0.29
SNX20-201ENST00000300590 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.21□□□□□ -0.3
SNX20-201ENST00000300590 RPAP2Q8IXW5 612 aaPredicted RBP13.21□□□□□ -0.3
SNX20-201ENST00000300590 ESYT1Q9BSJ8 1104 aa13.21□□□□□ -0.3
SNX20-201ENST00000300590 EMILIN1Q9Y6C2 1016 aa13.21□□□□□ -0.3
SNX20-201ENST00000300590 ERICH4A6NGS2 130 aa13.2□□□□□ -0.3
SNX20-201ENST00000300590 NPHP1O15259 732 aa13.2□□□□□ -0.3
SNX20-201ENST00000300590 MCM2P49736 904 aa13.2□□□□□ -0.3
SNX20-201ENST00000300590 CABP1Q9NZU7 370 aa13.2□□□□□ -0.3
SNX20-201ENST00000300590 MAP3K4Q9Y6R4 1608 aa13.2□□□□□ -0.3
SNX20-201ENST00000300590 ADGRL1O94910 1474 aa13.2□□□□□ -0.3
SNX20-201ENST00000300590 BRPF1P55201 1214 aaPredicted RBP13.2□□□□□ -0.3
SNX20-201ENST00000300590 CUL4AQ13619 759 aa13.2□□□□□ -0.3
SNX20-201ENST00000300590 TRERF1Q96PN7 1200 aa13.2□□□□□ -0.3
SNX20-201ENST00000300590 KCNJ4P48050 445 aa13.19□□□□□ -0.3
SNX20-201ENST00000300590 DDX54Q8TDD1 881 aaKnown RBP13.19□□□□□ -0.3
SNX20-201ENST00000300590 ADGRB2O60241 1585 aa13.19□□□□□ -0.3
SNX20-201ENST00000300590 CPA1P15085 419 aa13.19□□□□□ -0.3
SNX20-201ENST00000300590 CCDC186Q7Z3E2 898 aa13.19□□□□□ -0.3
SNX20-201ENST00000300590 TMEM51Q9NW97 253 aa13.19□□□□□ -0.3
SNX20-201ENST00000300590 MIS18AQ9NYP9 233 aa13.19□□□□□ -0.3
SNX20-201ENST00000300590 NSD2O96028 1365 aa13.18□□□□□ -0.3
SNX20-201ENST00000300590 NCBP1Q09161 790 aaKnown RBP13.18□□□□□ -0.3
SNX20-201ENST00000300590 HDGFL2Q7Z4V5 671 aaPredicted RBP13.18□□□□□ -0.3
SNX20-201ENST00000300590 NRBP1Q9UHY1 535 aa13.18□□□□□ -0.3
SNX20-201ENST00000300590 CHMP4AQ9BY43 222 aa13.18□□□□□ -0.3
SNX20-201ENST00000300590 POLKQ9UBT6 870 aa13.18□□□□□ -0.3
SNX20-201ENST00000300590 PTCH1Q13635 1447 aa13.18□□□□□ -0.3
SNX20-201ENST00000300590 VPS37CA5D8V6 355 aaPredicted RBP13.18□□□□□ -0.3
SNX20-201ENST00000300590 GOLGA6L6A8MZA4 724 aa13.18□□□□□ -0.3
SNX20-201ENST00000300590 DNM1Q05193 864 aaKnown RBP13.18□□□□□ -0.3
SNX20-201ENST00000300590 LUZP1Q86V48 1076 aa13.18□□□□□ -0.3
SNX20-201ENST00000300590 TNNT1P13805 278 aa13.17□□□□□ -0.3
SNX20-201ENST00000300590 TAF7LQ5H9L4 462 aa13.17□□□□□ -0.3
SNX20-201ENST00000300590 UNC5CLQ8IV45 518 aa13.17□□□□□ -0.3
SNX20-201ENST00000300590 CKAP2LQ8IYA6 745 aa13.17□□□□□ -0.3
SNX20-201ENST00000300590 ANKRD7Q92527 254 aa13.17□□□□□ -0.3
SNX20-201ENST00000300590 OGFRQ9NZT2 677 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms