RNA–Protein interactions for RNA: ENST00000300227.12

CCDC178-201, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC178, Length 3,087 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-201ENST00000300227 LTBP4Q8N2S1 1624 aa17.83■□□□□ 0.45
CCDC178-201ENST00000300227 PANK1Q8TE04 598 aa17.83■□□□□ 0.44
CCDC178-201ENST00000300227 CLUAP1Q96AJ1 413 aa17.83■□□□□ 0.44
CCDC178-201ENST00000300227 CT47B1P0C2W7 299 aaPredicted RBP17.83■□□□□ 0.44
CCDC178-201ENST00000300227 KRT24Q2M2I5 525 aa17.83■□□□□ 0.44
CCDC178-201ENST00000300227 C8orf58Q8NAV2 365 aa17.83■□□□□ 0.44
CCDC178-201ENST00000300227 TNNQ9UQP3 1299 aa17.83■□□□□ 0.44
CCDC178-201ENST00000300227 ZNF530Q6P9A1 599 aaPredicted RBP17.82■□□□□ 0.44
CCDC178-201ENST00000300227 PLEKHO1Q53GL0 409 aaPredicted RBP17.81■□□□□ 0.44
CCDC178-201ENST00000300227 IL17REQ8NFR9 667 aa17.81■□□□□ 0.44
CCDC178-201ENST00000300227 DLG5Q8TDM6 1919 aa17.81■□□□□ 0.44
CCDC178-201ENST00000300227 TSPYL4Q9UJ04 414 aa17.81■□□□□ 0.44
CCDC178-201ENST00000300227 MAP3K5Q99683 1374 aa17.81■□□□□ 0.44
CCDC178-201ENST00000300227 CHL1O00533 1208 aa17.8■□□□□ 0.44
CCDC178-201ENST00000300227 TWISTNBQ3B726 338 aaPredicted RBP17.8■□□□□ 0.44
CCDC178-201ENST00000300227 PELP1Q8IZL8 1130 aaKnown RBP17.8■□□□□ 0.44
CCDC178-201ENST00000300227 RAPGEF4Q8WZA2 1011 aa17.8■□□□□ 0.44
CCDC178-201ENST00000300227 CPDO75976 1380 aa17.8■□□□□ 0.44
CCDC178-201ENST00000300227 VAMP4O75379 141 aa17.8■□□□□ 0.44
CCDC178-201ENST00000300227 COG6Q9Y2V7 657 aa17.8■□□□□ 0.44
CCDC178-201ENST00000300227 PHRF1Q9P1Y6 1649 aaKnown RBP17.8■□□□□ 0.44
CCDC178-201ENST00000300227 STRN4Q9NRL3 753 aa17.79■□□□□ 0.44
CCDC178-201ENST00000300227 CRB1P82279 1406 aa17.79■□□□□ 0.44
CCDC178-201ENST00000300227 MPRIPQ6WCQ1 1025 aa17.78■□□□□ 0.44
CCDC178-201ENST00000300227 HTATSF1O43719 755 aaKnown RBP17.78■□□□□ 0.44
CCDC178-201ENST00000300227 LGR6Q9HBX8 967 aa17.78■□□□□ 0.44
CCDC178-201ENST00000300227 AMOTQ4VCS5 1084 aa17.78■□□□□ 0.44
CCDC178-201ENST00000300227 C1orf141Q5JVX7 400 aa17.78■□□□□ 0.44
CCDC178-201ENST00000300227 RGPD2P0DJD1 1756 aa17.77■□□□□ 0.44
CCDC178-201ENST00000300227 TOM1O60784 492 aa17.77■□□□□ 0.44
CCDC178-201ENST00000300227 TOM1L2Q6ZVM7 507 aa17.77■□□□□ 0.44
CCDC178-201ENST00000300227 NOB1Q9ULX3 412 aaKnown RBP17.77■□□□□ 0.44
CCDC178-201ENST00000300227 RLBP1P12271 317 aa17.77■□□□□ 0.43
CCDC178-201ENST00000300227 PDE3AQ14432 1141 aa17.77■□□□□ 0.43
CCDC178-201ENST00000300227 ZKSCAN2Q63HK3 967 aa17.77■□□□□ 0.43
CCDC178-201ENST00000300227 TATP17735 454 aaPredicted RBP17.76■□□□□ 0.43
CCDC178-201ENST00000300227 EVA1CP58658 441 aa17.76■□□□□ 0.43
CCDC178-201ENST00000300227 UBAP1LF5GYI3 381 aa17.75■□□□□ 0.43
CCDC178-201ENST00000300227 FTSJ3Q8IY81 847 aaKnown RBP17.75■□□□□ 0.43
CCDC178-201ENST00000300227 RGPD5Q99666 1765 aa17.75■□□□□ 0.43
CCDC178-201ENST00000300227 AKAP4Q5JQC9 854 aa17.75■□□□□ 0.43
CCDC178-201ENST00000300227 ROBO1Q9Y6N7 1651 aa17.75■□□□□ 0.43
CCDC178-201ENST00000300227 USP35Q9P2H5 1018 aa17.74■□□□□ 0.43
CCDC178-201ENST00000300227 NHSL1Q5SYE7 1610 aa17.74■□□□□ 0.43
CCDC178-201ENST00000300227 TRIM27P14373 513 aa17.73■□□□□ 0.43
CCDC178-201ENST00000300227 TAF7Q15545 349 aaPredicted RBP17.73■□□□□ 0.43
CCDC178-201ENST00000300227 ALDH1L2Q3SY69 923 aa17.73■□□□□ 0.43
CCDC178-201ENST00000300227 TEFQ10587 303 aa17.73■□□□□ 0.43
CCDC178-201ENST00000300227 NCAPD2Q15021 1401 aa17.73■□□□□ 0.43
CCDC178-201ENST00000300227 WDR17Q8IZU2 1322 aa17.72■□□□□ 0.43
CCDC178-201ENST00000300227 LARP1Q6PKG0 1096 aaKnown RBP17.72■□□□□ 0.43
CCDC178-201ENST00000300227 DZIP1LQ8IYY4 767 aaKnown RBP17.72■□□□□ 0.43
CCDC178-201ENST00000300227 ZNF428Q96B54 188 aa17.72■□□□□ 0.43
CCDC178-201ENST00000300227 CAMTA1Q9Y6Y1 1673 aa17.72■□□□□ 0.43
CCDC178-201ENST00000300227 ATF7IPQ6VMQ6 1270 aa17.72■□□□□ 0.43
CCDC178-201ENST00000300227 KIF16BQ96L93 1317 aa17.72■□□□□ 0.43
CCDC178-201ENST00000300227 BTG4Q9NY30 223 aa17.71■□□□□ 0.43
CCDC178-201ENST00000300227 CRYBG1Q9Y4K1 1723 aa17.71■□□□□ 0.43
CCDC178-201ENST00000300227 COL18A1P39060 1754 aa17.71■□□□□ 0.43
CCDC178-201ENST00000300227 ADAMTS2O95450 1211 aa17.71■□□□□ 0.43
CCDC178-201ENST00000300227 MRPL50Q8N5N7 158 aaKnown RBP17.71■□□□□ 0.43
CCDC178-201ENST00000300227 IPO8O15397 1037 aaKnown RBP17.7■□□□□ 0.42
CCDC178-201ENST00000300227 SPG7Q9UQ90 795 aa17.7■□□□□ 0.42
CCDC178-201ENST00000300227 MEGF6O75095 1541 aa17.7■□□□□ 0.42
CCDC178-201ENST00000300227 NUTM2BA6NNL0 878 aaPredicted RBP17.7■□□□□ 0.42
CCDC178-201ENST00000300227 NUTM2EB1AL46 878 aaPredicted RBP17.7■□□□□ 0.42
CCDC178-201ENST00000300227 RNMTO43148 476 aaKnown RBP17.7■□□□□ 0.42
CCDC178-201ENST00000300227 NUTM2AQ8IVF1 878 aaPredicted RBP17.7■□□□□ 0.42
CCDC178-201ENST00000300227 NECTIN2Q92692 538 aa17.7■□□□□ 0.42
CCDC178-201ENST00000300227 ITPRIPQ8IWB1 547 aa17.68■□□□□ 0.42
CCDC178-201ENST00000300227 COL5A2P05997 1499 aaPredicted RBP17.68■□□□□ 0.42
CCDC178-201ENST00000300227 CEMIPQ8WUJ3 1361 aa17.68■□□□□ 0.42
CCDC178-201ENST00000300227 BTBD11A6QL63 1104 aa17.67■□□□□ 0.42
CCDC178-201ENST00000300227 KCNQ3O43525 872 aa17.67■□□□□ 0.42
CCDC178-201ENST00000300227 MS4A1P11836 297 aa17.67■□□□□ 0.42
CCDC178-201ENST00000300227 PHKG2P15735 406 aa17.66■□□□□ 0.42
CCDC178-201ENST00000300227 MVPQ14764 893 aaKnown RBP17.66■□□□□ 0.42
CCDC178-201ENST00000300227 TMEM57Q8N5G2 664 aa17.66■□□□□ 0.42
CCDC178-201ENST00000300227 IFNL2Q8IZJ0 200 aa17.66■□□□□ 0.42
CCDC178-201ENST00000300227 AHDC1Q5TGY3 1603 aaPredicted RBP17.66■□□□□ 0.42
CCDC178-201ENST00000300227 CYP27B1O15528 508 aa17.66■□□□□ 0.42
CCDC178-201ENST00000300227 CARD10Q9BWT7 1032 aa17.66■□□□□ 0.42
CCDC178-201ENST00000300227 ABCC6O95255 1503 aa17.65■□□□□ 0.42
CCDC178-201ENST00000300227 SLC4A2P04920 1241 aa17.65■□□□□ 0.42
CCDC178-201ENST00000300227 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.64■□□□□ 0.41
CCDC178-201ENST00000300227 BRPF1P55201 1214 aaPredicted RBP17.64■□□□□ 0.41
CCDC178-201ENST00000300227 DDX54Q8TDD1 881 aaKnown RBP17.63■□□□□ 0.41
CCDC178-201ENST00000300227 LMO7Q8WWI1 1683 aa17.63■□□□□ 0.41
CCDC178-201ENST00000300227 IL2RBP14784 551 aa17.63■□□□□ 0.41
CCDC178-201ENST00000300227 ZCRB1Q8TBF4 217 aaKnown RBP17.63■□□□□ 0.41
CCDC178-201ENST00000300227 BABAM1Q9NWV8 329 aa17.63■□□□□ 0.41
CCDC178-201ENST00000300227 EIF2S2P20042 333 aaKnown RBP17.63■□□□□ 0.41
CCDC178-201ENST00000300227 ABCA3Q99758 1704 aa17.62■□□□□ 0.41
CCDC178-201ENST00000300227 NFATC2IPQ8NCF5 419 aa17.62■□□□□ 0.41
CCDC178-201ENST00000300227 STK31Q9BXU1 1019 aa17.62■□□□□ 0.41
CCDC178-201ENST00000300227 FAM208AQ9UK61 1670 aaKnown RBP17.62■□□□□ 0.41
CCDC178-201ENST00000300227 EIF4A1P60842 406 aaKnown RBP17.61■□□□□ 0.41
CCDC178-201ENST00000300227 SLC39A6Q13433 755 aa17.61■□□□□ 0.41
CCDC178-201ENST00000300227 SKAP1Q86WV1 359 aa17.61■□□□□ 0.41
CCDC178-201ENST00000300227 G2E3Q7L622 706 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms