RNA–Protein interactions for RNA: ENST00000300107.7

CLPX-201, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPX, Length 4,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-201ENST00000300107 MYO6Q9UM54 1294 aa15.12■□□□□ 0.01
CLPX-201ENST00000300107 KLHL40Q2TBA0 621 aa15.11■□□□□ 0.01
CLPX-201ENST00000300107 SMTNL1A8MU46 457 aa15.11■□□□□ 0.01
CLPX-201ENST00000300107 CASTP20810 708 aaKnown RBP15.11■□□□□ 0.01
CLPX-201ENST00000300107 TMCO3Q6UWJ1 677 aa15.11■□□□□ 0.01
CLPX-201ENST00000300107 KIF18AQ8NI77 898 aa15.11■□□□□ 0.01
CLPX-201ENST00000300107 ZNF692Q9BU19 519 aaPredicted RBP15.11■□□□□ 0.01
CLPX-201ENST00000300107 SCAND2PQ9GZW5 306 aaPredicted RBP15.11■□□□□ 0.01
CLPX-201ENST00000300107 TCEAL9Q9UHQ7 104 aa15.11■□□□□ 0.01
CLPX-201ENST00000300107 BAG4O95429 457 aaKnown RBP15.11■□□□□ 0.01
CLPX-201ENST00000300107 PRM3Q9NNZ6 103 aa15.11■□□□□ 0.01
CLPX-201ENST00000300107 AACSQ86V21 672 aa15.11■□□□□ 0.01
CLPX-201ENST00000300107 TRIM22Q8IYM9 498 aa15.11■□□□□ 0.01
CLPX-201ENST00000300107 UBE2Q2Q8WVN8 375 aa15.11■□□□□ 0.01
CLPX-201ENST00000300107 SIL1Q9H173 461 aa15.11■□□□□ 0.01
CLPX-201ENST00000300107 KIAA0754O94854 1291 aa15.1■□□□□ 0.01
CLPX-201ENST00000300107 SFPQP23246 707 aaKnown RBP eCLIP15.1■□□□□ 0.01
CLPX-201ENST00000300107 MX1P20591 662 aa15.1■□□□□ 0.01
CLPX-201ENST00000300107 CAMK4Q16566 473 aa15.1■□□□□ 0.01
CLPX-201ENST00000300107 NSD3Q9BZ95 1437 aa15.1■□□□□ 0.01
CLPX-201ENST00000300107 BMP2KLQ5H9B9 411 aa15.1■□□□□ 0.01
CLPX-201ENST00000300107 CCDC83Q8IWF9 413 aa15.1■□□□□ 0.01
CLPX-201ENST00000300107 FYB1O15117 783 aa15.1■□□□□ 0.01
CLPX-201ENST00000300107 IGHDP01880 384 aa15.1■□□□□ 0.01
CLPX-201ENST00000300107 XRCC6P12956 609 aaKnown RBP eCLIP15.1■□□□□ 0.01
CLPX-201ENST00000300107 CCDC158Q5M9N0 1113 aa15.1■□□□□ 0.01
CLPX-201ENST00000300107 ABCC11Q96J66 1382 aa15.09■□□□□ 0.01
CLPX-201ENST00000300107 TRIM34Q9BYJ4 488 aa15.09■□□□□ 0.01
CLPX-201ENST00000300107 KLHL34Q8N239 644 aa15.08■□□□□ 0.01
CLPX-201ENST00000300107 DYNC1I1O14576 645 aa15.08■□□□□ 0
CLPX-201ENST00000300107 TRIM27P14373 513 aa15.08■□□□□ 0
CLPX-201ENST00000300107 THUMPD2Q9BTF0 503 aaKnown RBP15.08■□□□□ 0
CLPX-201ENST00000300107 ATAD2Q6PL18 1390 aa15.08■□□□□ 0
CLPX-201ENST00000300107 CFAP100Q494V2 611 aa15.08■□□□□ 0
CLPX-201ENST00000300107 SMARCA5O60264 1052 aaPredicted RBP15.08■□□□□ 0
CLPX-201ENST00000300107 GLRX3O76003 335 aaKnown RBP15.08■□□□□ 0
CLPX-201ENST00000300107 PLEKHH1Q9ULM0 1364 aa15.07■□□□□ 0
CLPX-201ENST00000300107 GOLGA6L10A6NI86 522 aa15.07■□□□□ 0
CLPX-201ENST00000300107 NUTM1Q86Y26 1132 aa15.07■□□□□ 0
CLPX-201ENST00000300107 KIF1BPQ96EK5 621 aa15.07■□□□□ 0
CLPX-201ENST00000300107 DDX11Q96FC9 970 aa15.07■□□□□ 0
CLPX-201ENST00000300107 CCDC43Q96MW1 224 aaKnown RBP15.07■□□□□ 0
CLPX-201ENST00000300107 RBM42Q9BTD8 480 aaKnown RBP15.07■□□□□ 0
CLPX-201ENST00000300107 LUC7LQ9NQ29 371 aaKnown RBP15.07■□□□□ 0
CLPX-201ENST00000300107 SH2B1Q9NRF2 756 aaPredicted RBP15.07■□□□□ 0
CLPX-201ENST00000300107 TNNT1P13805 278 aa15.07■□□□□ 0
CLPX-201ENST00000300107 USP8P40818 1118 aa15.07■□□□□ 0
CLPX-201ENST00000300107 CCDC102AQ96A19 550 aa15.07■□□□□ 0
CLPX-201ENST00000300107 ANO10Q9NW15 660 aa15.07■□□□□ 0
CLPX-201ENST00000300107 CALRP27797 417 aaKnown RBP15.07■□□□□ 0
CLPX-201ENST00000300107 STIM1Q13586 685 aa15.07■□□□□ 0
CLPX-201ENST00000300107 TBC1D9Q6ZT07 1266 aa15.07■□□□□ 0
CLPX-201ENST00000300107 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.07■□□□□ 0
CLPX-201ENST00000300107 ZMYND15Q9H091 742 aa15.07■□□□□ 0
CLPX-201ENST00000300107 DHX29Q7Z478 1369 aaKnown RBP15.06■□□□□ 0
CLPX-201ENST00000300107 CCDC181Q5TID7 509 aa15.06■□□□□ 0
CLPX-201ENST00000300107 ARHGAP29Q52LW3 1261 aa15.06■□□□□ 0
CLPX-201ENST00000300107 HSP90AB2PQ58FF8 381 aa15.06■□□□□ 0
CLPX-201ENST00000300107 CTNNA3Q9UI47 895 aa15.06■□□□□ 0
CLPX-201ENST00000300107 CDKL5O76039 1030 aa15.06■□□□□ 0
CLPX-201ENST00000300107 ODF2Q5BJF6 829 aa15.06■□□□□ 0
CLPX-201ENST00000300107 RRS1Q15050 365 aaKnown RBP15.05■□□□□ 0
CLPX-201ENST00000300107 CGNQ9P2M7 1197 aaKnown RBP15.05■□□□□ 0
CLPX-201ENST00000300107 MTMR7Q9Y216 660 aa15.05■□□□□ 0
CLPX-201ENST00000300107 TOP2BQ02880 1626 aa15.05■□□□□ 0
CLPX-201ENST00000300107 TTC39AQ5SRH9 613 aa15.05■□□□□ 0
CLPX-201ENST00000300107 DEF6Q9H4E7 631 aa15.05■□□□□ 0
CLPX-201ENST00000300107 LIMCH1Q9UPQ0 1083 aa15.05■□□□□ 0
CLPX-201ENST00000300107 DDX54Q8TDD1 881 aaKnown RBP15.05■□□□□ -0
CLPX-201ENST00000300107 PRIMPOLQ96LW4 560 aa15.05■□□□□ -0
CLPX-201ENST00000300107 GBP3Q9H0R5 595 aa15.05■□□□□ -0
CLPX-201ENST00000300107 CLIP2Q9UDT6 1046 aa15.05■□□□□ -0
CLPX-201ENST00000300107 ZSCAN12O43309 604 aa15.04■□□□□ -0
CLPX-201ENST00000300107 EPB41L2O43491 1005 aaKnown RBP15.04■□□□□ -0
CLPX-201ENST00000300107 PRPF40BQ6NWY9 871 aaKnown RBP15.04■□□□□ -0
CLPX-201ENST00000300107 CDK5RAP3Q96JB5 506 aa15.04■□□□□ -0
CLPX-201ENST00000300107 C16orf45Q96MC5 204 aaPredicted RBP15.04■□□□□ -0
CLPX-201ENST00000300107 ADCY5O95622 1261 aa15.04■□□□□ -0
CLPX-201ENST00000300107 GDPD2Q9HCC8 539 aa15.04■□□□□ -0
CLPX-201ENST00000300107 ANKLE2Q86XL3 938 aa15.04■□□□□ -0
CLPX-201ENST00000300107 CCAR1Q8IX12 1150 aaKnown RBP15.04■□□□□ -0
CLPX-201ENST00000300107 STK11IPQ8N1F8 1099 aa15.04■□□□□ -0
CLPX-201ENST00000300107 PANK2Q9BZ23 570 aa15.04■□□□□ -0
CLPX-201ENST00000300107 RPGRIP1LQ68CZ1 1315 aa15.04■□□□□ -0
CLPX-201ENST00000300107 SUPT6HQ7KZ85 1726 aaKnown RBP15.04■□□□□ -0
CLPX-201ENST00000300107 CDK13Q14004 1512 aaKnown RBP15.04■□□□□ -0
CLPX-201ENST00000300107 NUTM2BA6NNL0 878 aaPredicted RBP15.04■□□□□ -0
CLPX-201ENST00000300107 NUTM2EB1AL46 878 aaPredicted RBP15.04■□□□□ -0
CLPX-201ENST00000300107 NEMFO60524 1076 aa15.04■□□□□ -0
CLPX-201ENST00000300107 RAB11FIP3O75154 756 aa15.04■□□□□ -0
CLPX-201ENST00000300107 URI1O94763 535 aaPredicted RBP15.04■□□□□ -0
CLPX-201ENST00000300107 ERLIN2O94905 339 aa15.04■□□□□ -0
CLPX-201ENST00000300107 NUTM2AQ8IVF1 878 aaPredicted RBP15.04■□□□□ -0
CLPX-201ENST00000300107 CALCOCO1Q9P1Z2 691 aa15.04■□□□□ -0
CLPX-201ENST00000300107 UVSSAQ2YD98 709 aa15.03■□□□□ -0
CLPX-201ENST00000300107 ZNF530Q6P9A1 599 aaPredicted RBP15.03■□□□□ -0
CLPX-201ENST00000300107 TXLNBQ8N3L3 684 aa15.03■□□□□ -0
CLPX-201ENST00000300107 NACAP1Q9BZK3 213 aa15.03■□□□□ -0
CLPX-201ENST00000300107 HSP90AB3PQ58FF7 597 aa15.03■□□□□ -0
CLPX-201ENST00000300107 IQCEQ6IPM2 695 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms