RNA–Protein interactions for RNA: ENST00000299705.9

TMED3-201, Transcript of transmembrane p24 trafficking protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED3, Length 1,475 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-201ENST00000299705 PRKAR2BP31323 418 aa23.93■■□□□ 1.42
TMED3-201ENST00000299705 FAM98CQ17RN3 349 aaKnown RBP23.93■■□□□ 1.42
TMED3-201ENST00000299705 OVOS2A0A0G2JMS6 1433 aa23.92■■□□□ 1.42
TMED3-201ENST00000299705 RXRBP28702 533 aa23.92■■□□□ 1.42
TMED3-201ENST00000299705 THSD7AQ9UPZ6 1657 aa23.91■■□□□ 1.42
TMED3-201ENST00000299705 FAM9BQ8IZU0 186 aa23.91■■□□□ 1.42
TMED3-201ENST00000299705 PLEKHF1Q96S99 279 aa23.91■■□□□ 1.42
TMED3-201ENST00000299705 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.91■■□□□ 1.42
TMED3-201ENST00000299705 AMOTQ4VCS5 1084 aa23.88■■□□□ 1.41
TMED3-201ENST00000299705 NEFMP07197 916 aa23.87■■□□□ 1.41
TMED3-201ENST00000299705 PLEKHO1Q53GL0 409 aaPredicted RBP23.87■■□□□ 1.41
TMED3-201ENST00000299705 RUNDC1Q96C34 613 aa23.87■■□□□ 1.41
TMED3-201ENST00000299705 PKD1L3Q7Z443 1732 aa23.87■■□□□ 1.41
TMED3-201ENST00000299705 EXOC5O00471 708 aa23.87■■□□□ 1.41
TMED3-201ENST00000299705 ZCRB1Q8TBF4 217 aaKnown RBP23.87■■□□□ 1.41
TMED3-201ENST00000299705 SPG7Q9UQ90 795 aa23.87■■□□□ 1.41
TMED3-201ENST00000299705 DDB1Q16531 1140 aa23.86■■□□□ 1.41
TMED3-201ENST00000299705 PHACTR3Q96KR7 559 aa23.86■■□□□ 1.41
TMED3-201ENST00000299705 LRRC37A3O60309 1634 aa23.85■■□□□ 1.41
TMED3-201ENST00000299705 TNS2Q63HR2 1409 aa23.85■■□□□ 1.41
TMED3-201ENST00000299705 SEPT12Q8IYM1 358 aa23.85■■□□□ 1.41
TMED3-201ENST00000299705 MAPK8IP3Q9UPT6 1336 aa23.85■■□□□ 1.41
TMED3-201ENST00000299705 CCDC146Q8IYE0 955 aa23.84■■□□□ 1.41
TMED3-201ENST00000299705 A0A0G2JS52 829 aa23.83■■□□□ 1.41
TMED3-201ENST00000299705 MYT1Q01538 1121 aa23.83■■□□□ 1.41
TMED3-201ENST00000299705 MTHFSDQ2M296 383 aaKnown RBP23.82■■□□□ 1.4
TMED3-201ENST00000299705 GAS2L2Q8NHY3 880 aa23.82■■□□□ 1.4
TMED3-201ENST00000299705 PCDH11XQ9BZA7 1347 aa23.81■■□□□ 1.4
TMED3-201ENST00000299705 PCDH11YQ9BZA8 1340 aa23.81■■□□□ 1.4
TMED3-201ENST00000299705 SHANK3Q9BYB0 1731 aa23.81■■□□□ 1.4
TMED3-201ENST00000299705 RGS12O14924 1447 aa23.8■■□□□ 1.4
TMED3-201ENST00000299705 ZNF530Q6P9A1 599 aaPredicted RBP23.79■■□□□ 1.4
TMED3-201ENST00000299705 CYP27B1O15528 508 aa23.78■■□□□ 1.4
TMED3-201ENST00000299705 PDE3BQ13370 1112 aa23.78■■□□□ 1.4
TMED3-201ENST00000299705 NFE2L2Q16236 605 aa23.78■■□□□ 1.4
TMED3-201ENST00000299705 IFNL2Q8IZJ0 200 aa23.78■■□□□ 1.4
TMED3-201ENST00000299705 APAF1O14727 1248 aa23.77■■□□□ 1.4
TMED3-201ENST00000299705 PHKG2P15735 406 aa23.77■■□□□ 1.4
TMED3-201ENST00000299705 AKAP4Q5JQC9 854 aa23.77■■□□□ 1.4
TMED3-201ENST00000299705 DDX54Q8TDD1 881 aaKnown RBP23.77■■□□□ 1.4
TMED3-201ENST00000299705 TMPOP42166 694 aaKnown RBP23.76■■□□□ 1.39
TMED3-201ENST00000299705 C1orf141Q5JVX7 400 aa23.76■■□□□ 1.39
TMED3-201ENST00000299705 MARCH10Q8NA82 808 aaPredicted RBP23.75■■□□□ 1.39
TMED3-201ENST00000299705 BRWD3Q6RI45 1802 aa23.75■■□□□ 1.39
TMED3-201ENST00000299705 NKX1-1Q15270 411 aaPredicted RBP23.75■■□□□ 1.39
TMED3-201ENST00000299705 NCBP3Q53F19 620 aaKnown RBP23.75■■□□□ 1.39
TMED3-201ENST00000299705 HSP90AB1P08238 724 aaKnown RBP23.74■■□□□ 1.39
TMED3-201ENST00000299705 KRT27Q7Z3Y8 459 aa23.74■■□□□ 1.39
TMED3-201ENST00000299705 MAP3K5Q99683 1374 aa23.73■■□□□ 1.39
TMED3-201ENST00000299705 GNAT3A8MTJ3 354 aa23.73■■□□□ 1.39
TMED3-201ENST00000299705 SOCS7O14512 581 aa23.73■■□□□ 1.39
TMED3-201ENST00000299705 HTATSF1O43719 755 aaKnown RBP23.73■■□□□ 1.39
TMED3-201ENST00000299705 RIPK4P57078 832 aa23.72■■□□□ 1.39
TMED3-201ENST00000299705 NGEFQ8N5V2 710 aa23.72■■□□□ 1.39
TMED3-201ENST00000299705 DLG5Q8TDM6 1919 aa23.71■■□□□ 1.39
TMED3-201ENST00000299705 BCL9O00512 1426 aa23.71■■□□□ 1.39
TMED3-201ENST00000299705 LMOD3Q0VAK6 560 aa23.7■■□□□ 1.38
TMED3-201ENST00000299705 DCAF5Q96JK2 942 aa23.7■■□□□ 1.38
TMED3-201ENST00000299705 RRP7AQ9Y3A4 280 aaKnown RBP23.7■■□□□ 1.38
TMED3-201ENST00000299705 NEUROD2Q15784 382 aa23.68■■□□□ 1.38
TMED3-201ENST00000299705 RTF1Q92541 710 aaKnown RBP23.68■■□□□ 1.38
TMED3-201ENST00000299705 ADAMTS7Q9UKP4 1686 aa23.68■■□□□ 1.38
TMED3-201ENST00000299705 CCDC27Q2M243 656 aa23.68■■□□□ 1.38
TMED3-201ENST00000299705 MPRIPQ6WCQ1 1025 aa23.67■■□□□ 1.38
TMED3-201ENST00000299705 TRIM35Q9UPQ4 493 aa23.67■■□□□ 1.38
TMED3-201ENST00000299705 KDM6AO15550 1401 aaPredicted RBP23.67■■□□□ 1.38
TMED3-201ENST00000299705 RNMTO43148 476 aaKnown RBP23.66■■□□□ 1.38
TMED3-201ENST00000299705 SCN11AQ9UI33 1791 aa23.66■■□□□ 1.38
TMED3-201ENST00000299705 CEMIPQ8WUJ3 1361 aa23.65■■□□□ 1.38
TMED3-201ENST00000299705 FAM196AQ6ZSG2 479 aa23.65■■□□□ 1.38
TMED3-201ENST00000299705 IL17REQ8NFR9 667 aa23.65■■□□□ 1.38
TMED3-201ENST00000299705 LGR6Q9HBX8 967 aa23.65■■□□□ 1.38
TMED3-201ENST00000299705 ERVV-2B6SEH9 535 aa23.64■■□□□ 1.38
TMED3-201ENST00000299705 FAM182BQ5T319 152 aa23.63■■□□□ 1.37
TMED3-201ENST00000299705 VIRMAQ69YN4 1812 aaKnown RBP23.63■■□□□ 1.37
TMED3-201ENST00000299705 MCM10Q7L590 875 aa23.62■■□□□ 1.37
TMED3-201ENST00000299705 DCTN1Q14203 1278 aa23.62■■□□□ 1.37
TMED3-201ENST00000299705 WWC1Q8IX03 1113 aa23.62■■□□□ 1.37
TMED3-201ENST00000299705 TOGARAM1Q9Y4F4 1720 aa23.61■■□□□ 1.37
TMED3-201ENST00000299705 SENP3-EIF4A1A0A087X0R7 540 aa23.61■■□□□ 1.37
TMED3-201ENST00000299705 DOT1LQ8TEK3 1739 aa23.6■■□□□ 1.37
TMED3-201ENST00000299705 HNRNPUQ00839 825 aaKnown RBP eCLIP23.6■■□□□ 1.37
TMED3-201ENST00000299705 MRC1P22897 1456 aa23.6■■□□□ 1.37
TMED3-201ENST00000299705 SLC52A2Q9HAB3 445 aa23.59■■□□□ 1.37
TMED3-201ENST00000299705 SALL2Q9Y467 1007 aaPredicted RBP23.59■■□□□ 1.37
TMED3-201ENST00000299705 SBF2Q86WG5 1849 aa23.59■■□□□ 1.37
TMED3-201ENST00000299705 PRIM1P49642 420 aaKnown RBP23.58■■□□□ 1.37
TMED3-201ENST00000299705 CABP4P57796 275 aa23.58■■□□□ 1.37
TMED3-201ENST00000299705 CALD1Q05682 793 aaKnown RBP23.58■■□□□ 1.37
TMED3-201ENST00000299705 TEFQ10587 303 aa23.57■■□□□ 1.36
TMED3-201ENST00000299705 THUMPD2Q9BTF0 503 aaKnown RBP23.57■■□□□ 1.36
TMED3-201ENST00000299705 ITGB4P16144 1822 aa23.57■■□□□ 1.36
TMED3-201ENST00000299705 NHSQ6T4R5 1651 aa23.57■■□□□ 1.36
TMED3-201ENST00000299705 ZNF521Q96K83 1311 aa23.56■■□□□ 1.36
TMED3-201ENST00000299705 WDR63Q8IWG1 891 aa23.56■■□□□ 1.36
TMED3-201ENST00000299705 ACSBG1Q96GR2 724 aa23.56■■□□□ 1.36
TMED3-201ENST00000299705 SIPA1L3O60292 1781 aaPredicted RBP23.56■■□□□ 1.36
TMED3-201ENST00000299705 NFATC2IPQ8NCF5 419 aa23.56■■□□□ 1.36
TMED3-201ENST00000299705 TMOD3Q9NYL9 352 aa23.56■■□□□ 1.36
TMED3-201ENST00000299705 TAF7Q15545 349 aaPredicted RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms