RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 NEBLO76041 1014 aa6.52□□□□□ -1.37
CPSF2-201ENST00000298875 TUBB4BP68371 445 aa6.52□□□□□ -1.37
CPSF2-201ENST00000298875 TICAM2Q86XR7 235 aa6.52□□□□□ -1.37
CPSF2-201ENST00000298875 CASQ1P31415 396 aa6.52□□□□□ -1.37
CPSF2-201ENST00000298875 CCDC148Q8NFR7 591 aa6.52□□□□□ -1.37
CPSF2-201ENST00000298875 WDR66Q8TBY9 1149 aa6.52□□□□□ -1.37
CPSF2-201ENST00000298875 CCDC158Q5M9N0 1113 aa6.52□□□□□ -1.37
CPSF2-201ENST00000298875 CCDC91Q7Z6B0 441 aa6.52□□□□□ -1.37
CPSF2-201ENST00000298875 FAM114A1Q8IWE2 563 aa6.52□□□□□ -1.37
CPSF2-201ENST00000298875 GCC1Q96CN9 775 aa6.52□□□□□ -1.37
CPSF2-201ENST00000298875 SHTN1A0MZ66 631 aa6.51□□□□□ -1.37
CPSF2-201ENST00000298875 JAKMIP3Q5VZ66 844 aa6.51□□□□□ -1.37
CPSF2-201ENST00000298875 FYCO1Q9BQS8 1478 aa6.51□□□□□ -1.37
CPSF2-201ENST00000298875 DYNC1I1O14576 645 aa6.51□□□□□ -1.37
CPSF2-201ENST00000298875 LARP1BQ659C4 914 aaKnown RBP6.51□□□□□ -1.37
CPSF2-201ENST00000298875 TMCO3Q6UWJ1 677 aa6.51□□□□□ -1.37
CPSF2-201ENST00000298875 PAIP2Q9BPZ3 127 aaKnown RBP6.51□□□□□ -1.37
CPSF2-201ENST00000298875 NUP62CLQ9H1M0 184 aa6.51□□□□□ -1.37
CPSF2-201ENST00000298875 C11orf95C9JLR9 678 aaPredicted RBP6.51□□□□□ -1.37
CPSF2-201ENST00000298875 MAP9Q49MG5 647 aa6.51□□□□□ -1.37
CPSF2-201ENST00000298875 MYOM3Q5VTT5 1437 aa6.51□□□□□ -1.37
CPSF2-201ENST00000298875 CAVIN2O95810 425 aa6.51□□□□□ -1.37
CPSF2-201ENST00000298875 CBX1P83916 185 aa6.51□□□□□ -1.37
CPSF2-201ENST00000298875 CAMK4Q16566 473 aa6.51□□□□□ -1.37
CPSF2-201ENST00000298875 ZNF397Q8NF99 534 aaPredicted RBP6.51□□□□□ -1.37
CPSF2-201ENST00000298875 CCDC113Q9H0I3 377 aa6.51□□□□□ -1.37
CPSF2-201ENST00000298875 CGNQ9P2M7 1197 aaKnown RBP6.51□□□□□ -1.37
CPSF2-201ENST00000298875 GRIN2AQ12879 1464 aa6.51□□□□□ -1.37
CPSF2-201ENST00000298875 TAF4BQ92750 862 aa6.51□□□□□ -1.37
CPSF2-201ENST00000298875 UPF3BQ9BZI7 483 aaKnown RBP6.51□□□□□ -1.37
CPSF2-201ENST00000298875 PDRG1Q9NUG6 133 aa6.51□□□□□ -1.37
CPSF2-201ENST00000298875 CCDC178Q5BJE1 867 aa6.51□□□□□ -1.37
CPSF2-201ENST00000298875 ZSCAN30Q86W11 494 aa6.51□□□□□ -1.37
CPSF2-201ENST00000298875 CCDC97Q96F63 343 aaPredicted RBP6.51□□□□□ -1.37
CPSF2-201ENST00000298875 SUPT6HQ7KZ85 1726 aaKnown RBP6.51□□□□□ -1.37
CPSF2-201ENST00000298875 FGD6Q6ZV73 1430 aa6.51□□□□□ -1.37
CPSF2-201ENST00000298875 NACAP1Q9BZK3 213 aa6.51□□□□□ -1.37
CPSF2-201ENST00000298875 TUBB4AP04350 444 aa6.51□□□□□ -1.37
CPSF2-201ENST00000298875 IBSPP21815 317 aaPredicted RBP6.51□□□□□ -1.37
CPSF2-201ENST00000298875 GOPCQ9HD26 462 aa6.51□□□□□ -1.37
CPSF2-201ENST00000298875 TMCO5BA8MYB1 307 aa6.5□□□□□ -1.37
CPSF2-201ENST00000298875 CDKL5O76039 1030 aa6.5□□□□□ -1.37
CPSF2-201ENST00000298875 AQRO60306 1485 aaKnown RBP eCLIP6.5□□□□□ -1.37
CPSF2-201ENST00000298875 MAP2K1Q02750 393 aaPredicted RBP6.5□□□□□ -1.37
CPSF2-201ENST00000298875 SYCE3A1L190 88 aa6.5□□□□□ -1.37
CPSF2-201ENST00000298875 SMTNL1A8MU46 457 aa6.5□□□□□ -1.37
CPSF2-201ENST00000298875 EPB41L2O43491 1005 aaKnown RBP6.5□□□□□ -1.37
CPSF2-201ENST00000298875 IVLP07476 585 aa6.5□□□□□ -1.37
CPSF2-201ENST00000298875 ATF3P18847 181 aa6.5□□□□□ -1.37
CPSF2-201ENST00000298875 TIGD1Q96MW7 591 aa6.5□□□□□ -1.37
CPSF2-201ENST00000298875 GNL3LQ9NVN8 582 aaKnown RBP6.5□□□□□ -1.37
CPSF2-201ENST00000298875 DNAJC5Q9H3Z4 198 aa6.5□□□□□ -1.37
CPSF2-201ENST00000298875 NOL7Q9UMY1 257 aaKnown RBP6.5□□□□□ -1.37
CPSF2-201ENST00000298875 CCDC57Q2TAC2 916 aa6.5□□□□□ -1.37
CPSF2-201ENST00000298875 GTPBP4Q9BZE4 634 aaKnown RBP6.5□□□□□ -1.37
CPSF2-201ENST00000298875 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.5□□□□□ -1.37
CPSF2-201ENST00000298875 EXOSC9Q06265 439 aaKnown RBP6.5□□□□□ -1.37
CPSF2-201ENST00000298875 TWISTNBQ3B726 338 aaPredicted RBP6.5□□□□□ -1.37
CPSF2-201ENST00000298875 ANKLE2Q86XL3 938 aa6.5□□□□□ -1.37
CPSF2-201ENST00000298875 SWAP70Q9UH65 585 aa6.5□□□□□ -1.37
CPSF2-201ENST00000298875 SSBP05455 408 aaKnown RBP eCLIP6.5□□□□□ -1.37
CPSF2-201ENST00000298875 FILIP1Q7Z7B0 1213 aa6.5□□□□□ -1.37
CPSF2-201ENST00000298875 CRACR2AQ9BSW2 395 aa6.5□□□□□ -1.37
CPSF2-201ENST00000298875 RBM42Q9BTD8 480 aaKnown RBP6.5□□□□□ -1.37
CPSF2-201ENST00000298875 NEMFO60524 1076 aa6.5□□□□□ -1.37
CPSF2-201ENST00000298875 RBM5P52756 815 aaKnown RBP eCLIP6.5□□□□□ -1.37
CPSF2-201ENST00000298875 SOGA3Q5TF21 947 aa6.5□□□□□ -1.37
CPSF2-201ENST00000298875 CDCA7LQ96GN5 454 aa6.5□□□□□ -1.37
CPSF2-201ENST00000298875 SPINK5Q9NQ38 1064 aaPredicted RBP6.5□□□□□ -1.37
CPSF2-201ENST00000298875 CFAP45Q9UL16 551 aa6.5□□□□□ -1.37
CPSF2-201ENST00000298875 FKBP4Q02790 459 aaKnown RBP eCLIP6.49□□□□□ -1.37
CPSF2-201ENST00000298875 BCAR3O75815 825 aa6.49□□□□□ -1.37
CPSF2-201ENST00000298875 PRKAR2BP31323 418 aa6.49□□□□□ -1.37
CPSF2-201ENST00000298875 EIF5P55010 431 aaKnown RBP6.49□□□□□ -1.37
CPSF2-201ENST00000298875 ADAMTS8Q9UP79 889 aa6.49□□□□□ -1.37
CPSF2-201ENST00000298875 RUSC2Q8N2Y8 1516 aa6.49□□□□□ -1.37
CPSF2-201ENST00000298875 DESP17661 470 aa6.49□□□□□ -1.37
CPSF2-201ENST00000298875 MTHFSP49914 203 aa6.49□□□□□ -1.37
CPSF2-201ENST00000298875 SEPT6Q14141 434 aa6.49□□□□□ -1.37
CPSF2-201ENST00000298875 ARHGAP29Q52LW3 1261 aa6.49□□□□□ -1.37
CPSF2-201ENST00000298875 TSR2Q969E8 191 aaKnown RBP6.49□□□□□ -1.37
CPSF2-201ENST00000298875 ZNF76P36508 570 aa6.49□□□□□ -1.37
CPSF2-201ENST00000298875 TCP11L2Q8N4U5 519 aa6.49□□□□□ -1.37
CPSF2-201ENST00000298875 TMX1Q9H3N1 280 aa6.49□□□□□ -1.37
CPSF2-201ENST00000298875 MAP3K11Q16584 847 aa6.49□□□□□ -1.37
CPSF2-201ENST00000298875 CHD1LQ86WJ1 897 aa6.49□□□□□ -1.37
CPSF2-201ENST00000298875 PIBF1Q8WXW3 757 aa6.49□□□□□ -1.37
CPSF2-201ENST00000298875 CEP63Q96MT8 703 aa6.49□□□□□ -1.37
CPSF2-201ENST00000298875 LRRC9Q6ZRR7 1453 aa6.49□□□□□ -1.37
CPSF2-201ENST00000298875 IGF1RP08069 1367 aa6.49□□□□□ -1.37
CPSF2-201ENST00000298875 GOLGA6L9A6NEM1 432 aa6.49□□□□□ -1.37
CPSF2-201ENST00000298875 ZSCAN12O43309 604 aa6.49□□□□□ -1.37
CPSF2-201ENST00000298875 CASTP20810 708 aaKnown RBP6.49□□□□□ -1.37
CPSF2-201ENST00000298875 CWC27Q6UX04 472 aaKnown RBP6.49□□□□□ -1.37
CPSF2-201ENST00000298875 DNAJC5BQ9UF47 199 aa6.49□□□□□ -1.37
CPSF2-201ENST00000298875 GPRASP1Q5JY77 1395 aa6.49□□□□□ -1.37
CPSF2-201ENST00000298875 ATAD2Q6PL18 1390 aa6.49□□□□□ -1.37
CPSF2-201ENST00000298875 SARNPP82979 210 aaKnown RBP6.49□□□□□ -1.37
CPSF2-201ENST00000298875 CD109Q6YHK3 1445 aa6.49□□□□□ -1.37
CPSF2-201ENST00000298875 CCT4P50991 539 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms