RNA–Protein interactions for RNA: ENST00000298355.7

TRIM9-201, Transcript of tripartite motif containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM9, Length 5,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-201ENST00000298355 HIP1O00291 1037 aa20.17■□□□□ 0.82
TRIM9-201ENST00000298355 SHTN1A0MZ66 631 aa20.17■□□□□ 0.82
TRIM9-201ENST00000298355 FAM193AP78312 1265 aa20.17■□□□□ 0.82
TRIM9-201ENST00000298355 FSD1Q9BTV5 496 aa20.17■□□□□ 0.82
TRIM9-201ENST00000298355 CTR9Q6PD62 1173 aa20.17■□□□□ 0.82
TRIM9-201ENST00000298355 FERMT3Q86UX7 667 aa20.17■□□□□ 0.82
TRIM9-201ENST00000298355 VGFO15240 615 aaPredicted RBP20.16■□□□□ 0.82
TRIM9-201ENST00000298355 GSDMDP57764 484 aa20.16■□□□□ 0.82
TRIM9-201ENST00000298355 JAKMIP1Q96N16 626 aaKnown RBP20.16■□□□□ 0.82
TRIM9-201ENST00000298355 U2AF2P26368 475 aaKnown RBP eCLIP20.16■□□□□ 0.82
TRIM9-201ENST00000298355 RRP12Q5JTH9 1297 aaKnown RBP20.16■□□□□ 0.82
TRIM9-201ENST00000298355 JAKMIP3Q5VZ66 844 aa20.16■□□□□ 0.82
TRIM9-201ENST00000298355 CEP89Q96ST8 783 aa20.16■□□□□ 0.82
TRIM9-201ENST00000298355 ANO10Q9NW15 660 aa20.16■□□□□ 0.82
TRIM9-201ENST00000298355 CCDC186Q7Z3E2 898 aa20.16■□□□□ 0.82
TRIM9-201ENST00000298355 DAPK1P53355 1430 aa20.15■□□□□ 0.82
TRIM9-201ENST00000298355 FSD2A1L4K1 749 aa20.15■□□□□ 0.82
TRIM9-201ENST00000298355 CASQ1P31415 396 aa20.15■□□□□ 0.82
TRIM9-201ENST00000298355 SAFBQ15424 915 aaKnown RBP eCLIP20.15■□□□□ 0.82
TRIM9-201ENST00000298355 GIMAP6Q6P9H5 292 aa20.15■□□□□ 0.82
TRIM9-201ENST00000298355 ZNF445P59923 1031 aa20.15■□□□□ 0.82
TRIM9-201ENST00000298355 NUCB1Q02818 461 aa20.15■□□□□ 0.82
TRIM9-201ENST00000298355 CCDC83Q8IWF9 413 aa20.15■□□□□ 0.82
TRIM9-201ENST00000298355 DMTNQ08495 405 aa20.14■□□□□ 0.82
TRIM9-201ENST00000298355 TRDNQ13061 729 aa20.14■□□□□ 0.82
TRIM9-201ENST00000298355 CCDC47Q96A33 483 aaKnown RBP20.14■□□□□ 0.82
TRIM9-201ENST00000298355 PPP1R9BQ96SB3 815 aa20.14■□□□□ 0.82
TRIM9-201ENST00000298355 DDX19AQ9NUU7 478 aaKnown RBP20.14■□□□□ 0.82
TRIM9-201ENST00000298355 UNC13AQ9UPW8 1703 aa20.14■□□□□ 0.82
TRIM9-201ENST00000298355 PTPN23Q9H3S7 1636 aa20.14■□□□□ 0.82
TRIM9-201ENST00000298355 ZNF500O60304 480 aaPredicted RBP20.14■□□□□ 0.81
TRIM9-201ENST00000298355 MX1P20591 662 aa20.14■□□□□ 0.81
TRIM9-201ENST00000298355 RBM42Q9BTD8 480 aaKnown RBP20.14■□□□□ 0.81
TRIM9-201ENST00000298355 TRHP20396 242 aaPredicted RBP20.14■□□□□ 0.81
TRIM9-201ENST00000298355 RASSF4Q9H2L5 321 aa20.14■□□□□ 0.81
TRIM9-201ENST00000298355 DDX11Q96FC9 970 aa20.13■□□□□ 0.81
TRIM9-201ENST00000298355 ALDH1L2Q3SY69 923 aa20.13■□□□□ 0.81
TRIM9-201ENST00000298355 CRACR2AQ9BSW2 395 aa20.13■□□□□ 0.81
TRIM9-201ENST00000298355 IVLP07476 585 aa20.13■□□□□ 0.81
TRIM9-201ENST00000298355 UTP14CQ5TAP6 766 aaKnown RBP20.13■□□□□ 0.81
TRIM9-201ENST00000298355 TMPOP42166 694 aaKnown RBP20.13■□□□□ 0.81
TRIM9-201ENST00000298355 ZNF165P49910 485 aa20.13■□□□□ 0.81
TRIM9-201ENST00000298355 BRPF1P55201 1214 aaPredicted RBP20.13■□□□□ 0.81
TRIM9-201ENST00000298355 CFAP70Q5T0N1 1121 aa20.13■□□□□ 0.81
TRIM9-201ENST00000298355 SLC12A5Q9H2X9 1139 aa20.13■□□□□ 0.81
TRIM9-201ENST00000298355 CCT4P50991 539 aaKnown RBP20.12■□□□□ 0.81
TRIM9-201ENST00000298355 PIBF1Q8WXW3 757 aa20.12■□□□□ 0.81
TRIM9-201ENST00000298355 ZFP91Q96JP5 570 aaPredicted RBP20.12■□□□□ 0.81
TRIM9-201ENST00000298355 SUPT6HQ7KZ85 1726 aaKnown RBP20.12■□□□□ 0.81
TRIM9-201ENST00000298355 SLU7O95391 586 aaKnown RBP20.12■□□□□ 0.81
TRIM9-201ENST00000298355 CASTP20810 708 aaKnown RBP20.12■□□□□ 0.81
TRIM9-201ENST00000298355 CFAP100Q494V2 611 aa20.12■□□□□ 0.81
TRIM9-201ENST00000298355 BLOC1S2Q6QNY1 142 aa20.12■□□□□ 0.81
TRIM9-201ENST00000298355 DNAAF4Q8WXU2 420 aa20.12■□□□□ 0.81
TRIM9-201ENST00000298355 MAP4K4O95819 1239 aaPredicted RBP20.12■□□□□ 0.81
TRIM9-201ENST00000298355 TMX3Q96JJ7 454 aa20.11■□□□□ 0.81
TRIM9-201ENST00000298355 PLCD4Q9BRC7 762 aa20.11■□□□□ 0.81
TRIM9-201ENST00000298355 CLSTN1O94985 981 aa20.11■□□□□ 0.81
TRIM9-201ENST00000298355 MNAT1P51948 309 aa20.11■□□□□ 0.81
TRIM9-201ENST00000298355 STX6O43752 255 aa20.11■□□□□ 0.81
TRIM9-201ENST00000298355 USP48Q86UV5 1035 aa20.11■□□□□ 0.81
TRIM9-201ENST00000298355 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.11■□□□□ 0.81
TRIM9-201ENST00000298355 V9GYY5 206 aaPredicted RBP20.11■□□□□ 0.81
TRIM9-201ENST00000298355 SYNJ2O15056 1496 aa20.11■□□□□ 0.81
TRIM9-201ENST00000298355 GOLGA6L10A6NI86 522 aa20.11■□□□□ 0.81
TRIM9-201ENST00000298355 JMYQ8N9B5 988 aa20.11■□□□□ 0.81
TRIM9-201ENST00000298355 CABP2Q9NPB3 220 aa20.11■□□□□ 0.81
TRIM9-201ENST00000298355 SMARCA5O60264 1052 aaPredicted RBP20.1■□□□□ 0.81
TRIM9-201ENST00000298355 OSCARQ8IYS5 282 aa20.1■□□□□ 0.81
TRIM9-201ENST00000298355 DACH1Q9UI36 760 aa20.1■□□□□ 0.81
TRIM9-201ENST00000298355 HECW1Q76N89 1606 aa20.1■□□□□ 0.81
TRIM9-201ENST00000298355 RIOK3O14730 519 aaKnown RBP20.1■□□□□ 0.81
TRIM9-201ENST00000298355 CTAGE5O15320 804 aa20.1■□□□□ 0.81
TRIM9-201ENST00000298355 CAVIN2O95810 425 aa20.1■□□□□ 0.81
TRIM9-201ENST00000298355 SLC4A2P04920 1241 aa20.1■□□□□ 0.81
TRIM9-201ENST00000298355 NFXL1Q6ZNB6 911 aa20.1■□□□□ 0.81
TRIM9-201ENST00000298355 FAM200AQ8TCP9 573 aa20.1■□□□□ 0.81
TRIM9-201ENST00000298355 LTV1Q96GA3 475 aaPredicted RBP20.1■□□□□ 0.81
TRIM9-201ENST00000298355 LIMCH1Q9UPQ0 1083 aa20.1■□□□□ 0.81
TRIM9-201ENST00000298355 NEXNQ0ZGT2 675 aa20.09■□□□□ 0.81
TRIM9-201ENST00000298355 RALYLQ86SE5 291 aaKnown RBP20.09■□□□□ 0.81
TRIM9-201ENST00000298355 SNAPC4Q5SXM2 1469 aa20.09■□□□□ 0.81
TRIM9-201ENST00000298355 PRG4Q92954 1404 aaPredicted RBP20.09■□□□□ 0.81
TRIM9-201ENST00000298355 C10orf67Q8IYJ2 551 aa20.09■□□□□ 0.81
TRIM9-201ENST00000298355 SH2B1Q9NRF2 756 aaPredicted RBP20.09■□□□□ 0.81
TRIM9-201ENST00000298355 ARHGAP29Q52LW3 1261 aa20.09■□□□□ 0.81
TRIM9-201ENST00000298355 CWC27Q6UX04 472 aaKnown RBP20.08■□□□□ 0.81
TRIM9-201ENST00000298355 LAMC3Q9Y6N6 1575 aa20.08■□□□□ 0.81
TRIM9-201ENST00000298355 POTEB2H3BUK9 544 aa20.08■□□□□ 0.81
TRIM9-201ENST00000298355 SKILP12757 684 aa20.08■□□□□ 0.81
TRIM9-201ENST00000298355 KDM4AO75164 1064 aa20.08■□□□□ 0.8
TRIM9-201ENST00000298355 MAP9Q49MG5 647 aa20.08■□□□□ 0.8
TRIM9-201ENST00000298355 PARD3Q8TEW0 1356 aa20.08■□□□□ 0.8
TRIM9-201ENST00000298355 TROQ12816 1431 aaPredicted RBP20.07■□□□□ 0.8
TRIM9-201ENST00000298355 GOLGA6L7A0A1B0GV03 622 aa20.07■□□□□ 0.8
TRIM9-201ENST00000298355 DHX16O60231 1041 aaKnown RBP20.07■□□□□ 0.8
TRIM9-201ENST00000298355 PCF11O94913 1555 aaKnown RBP20.07■□□□□ 0.8
TRIM9-201ENST00000298355 TTC31Q49AM3 519 aaPredicted RBP20.07■□□□□ 0.8
TRIM9-201ENST00000298355 TTC22Q5TAA0 569 aa20.07■□□□□ 0.8
TRIM9-201ENST00000298355 IQCEQ6IPM2 695 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms